Gene annotation
Transcriptome id Sobic.010G028800.2,Sobic.010G028800.1
Synonym Sb10g002630
Functional annotation oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed
UniProt A0A1W0VR79 , A0A194YH02
Pfam PF13532
Panther DB PTHR31447 PTHR31447:SF1
NCBI CDD KOG4176; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G17970 : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
RAP-DB (Rice) LOC_Os06g04660.1 : oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a050098
Brachypodium PNT76677 , KQK19935
Barley HORVU7Hr1G018340.3 , HORVU7Hr1G018340.2 , HORVU7Hr1G018340.1 , HORVU7Hr1G018340.6 , HORVU7Hr1G018340.5 , HORVU7Hr1G018340.4 , HORVU7Hr1G018340.9 , HORVU7Hr1G018340.8 , HORVU7Hr1G018340.11 , HORVU7Hr1G018340.10 , HORVU7Hr1G018340.17 , HORVU7Hr1G018340.16 , HORVU7Hr1G018340.15 , HORVU7Hr1G018340.14
Wheat TraesCS7A02G081300 , TraesCS4A02G378300
Populus -


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cDNA sequences
Sobic.010G028800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G084900 expressed protein -
2 Sobic.010G101800 dynamin, putative, expressed K01528: dynamin 1/3
3 Sobic.010G056000 GAGA-binding protein, putative, expressed -
4 Sobic.002G310200 expressed protein -
5 Sobic.007G186900 PP2A regulatory subunit TAP46, putative, expressed -
6 Sobic.006G165000 RNA recognition motif containing protein, expressed -
7 Sobic.001G155000 DNA-directed RNA polymerase II subunit RPB2, putative, expressed K03010: RPB2, DNA-directed RNA polymerase II subunit RPB2
8 Sobic.009G083500 - -
9 Sobic.001G407200 SacI homology domain containing protein, expressed -
10 Sobic.003G184699 - -
11 Sobic.008G047800 WD domain, G-beta repeat domain containing protein, expressed K15361: WDR48, WD repeat-containing protein 48
12 Sobic.006G222300 MBTB7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
13 Sobic.003G241200 nucampholin, putative, expressed K13100: pre-mRNA-splicing factor CWC22
14 Sobic.008G162900 peroxisome assembly protein, putative, expressed K06664: PEX2, peroxin-2
15 Sobic.004G039700 OsFBX188 - F-box domain containing protein, expressed -
16 Sobic.004G084300 MYB family transcription factor, putative, expressed K11324: DMAP1, SWC4, DNA methyltransferase 1-associated protein 1
17 Sobic.009G065100 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
18 Sobic.001G222500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K14442: DHX36, ATP-dependent RNA helicase DHX36
19 Sobic.003G205801 - -
20 Sobic.010G136600 - -


Gene co-expression network
sample Sobic010G028800 Sobic010G028800 Sobic003G084900 Sobic003G084900 Sobic010G028800--Sobic003G084900 Sobic010G101800 Sobic010G101800 Sobic010G028800--Sobic010G101800 Sobic010G056000 Sobic010G056000 Sobic010G028800--Sobic010G056000 Sobic002G310200 Sobic002G310200 Sobic010G028800--Sobic002G310200 Sobic007G186900 Sobic007G186900 Sobic010G028800--Sobic007G186900 Sobic006G165000 Sobic006G165000 Sobic010G028800--Sobic006G165000 Sobic001G155000 Sobic001G155000 Sobic010G028800--Sobic001G155000 Sobic009G083500 Sobic009G083500 Sobic010G028800--Sobic009G083500 Sobic001G407200 Sobic001G407200 Sobic010G028800--Sobic001G407200 Sobic003G084900--Sobic010G056000 Sobic007G096000 Sobic007G096000 Sobic003G084900--Sobic007G096000 Sobic003G084900--Sobic010G028800 Sobic008G173900 Sobic008G173900 Sobic003G084900--Sobic008G173900 Sobic008G054500 Sobic008G054500 Sobic003G084900--Sobic008G054500 Sobic003G084900--Sobic006G165000 Sobic002G144933 Sobic002G144933 Sobic003G084900--Sobic002G144933 Sobic001G111900 Sobic001G111900 Sobic003G084900--Sobic001G111900 Sobic003G268300 Sobic003G268300 Sobic003G084900--Sobic003G268300 Sobic002G297200 Sobic002G297200 Sobic010G101800--Sobic002G297200 Sobic010G101800--Sobic001G155000 Sobic007G167500 Sobic007G167500 Sobic010G101800--Sobic007G167500 Sobic010G101800--Sobic010G028800 Sobic003G397800 Sobic003G397800 Sobic010G101800--Sobic003G397800 Sobic001G409600 Sobic001G409600 Sobic010G101800--Sobic001G409600 Sobic010G101800--Sobic002G310200 Sobic010G053800 Sobic010G053800 Sobic010G101800--Sobic010G053800 Sobic002G309600 Sobic002G309600 Sobic010G101800--Sobic002G309600 Sobic010G056000--Sobic001G111900 Sobic010G056000--Sobic003G084900 Sobic010G056000--Sobic010G028800 Sobic009G127900 Sobic009G127900 Sobic010G056000--Sobic009G127900 Sobic003G087400 Sobic003G087400 Sobic010G056000--Sobic003G087400 Sobic003G187400 Sobic003G187400 Sobic010G056000--Sobic003G187400 Sobic005G077466 Sobic005G077466 Sobic010G056000--Sobic005G077466 Sobic001G094000 Sobic001G094000 Sobic010G056000--Sobic001G094000 Sobic002G157300 Sobic002G157300 Sobic010G056000--Sobic002G157300 Sobic001G222500 Sobic001G222500 Sobic002G310200--Sobic001G222500 Sobic008G047800 Sobic008G047800 Sobic002G310200--Sobic008G047800 Sobic007G217000 Sobic007G217000 Sobic002G310200--Sobic007G217000 Sobic004G084300 Sobic004G084300 Sobic002G310200--Sobic004G084300 Sobic002G310200--Sobic007G096000 Sobic002G310200--Sobic010G101800 Sobic003G443100 Sobic003G443100 Sobic002G310200--Sobic003G443100 Sobic008G067600 Sobic008G067600 Sobic002G310200--Sobic008G067600 Sobic004G067700 Sobic004G067700 Sobic002G310200--Sobic004G067700 Sobic007G186900--Sobic010G028800 Sobic006G142775 Sobic006G142775 Sobic007G186900--Sobic006G142775 Sobic007G186900--Sobic010G056000 Sobic003G278500 Sobic003G278500 Sobic007G186900--Sobic003G278500 Sobic007G186900--Sobic010G101800 Sobic001G191600 Sobic001G191600 Sobic007G186900--Sobic001G191600 Sobic001G451400 Sobic001G451400 Sobic007G186900--Sobic001G451400 Sobic003G029700 Sobic003G029700 Sobic007G186900--Sobic003G029700 Sobic001G205200 Sobic001G205200 Sobic007G186900--Sobic001G205200 Sobic003G241200 Sobic003G241200 Sobic006G165000--Sobic003G241200 Sobic006G165000--Sobic001G155000 Sobic006G165000--Sobic003G084900 Sobic003G200200 Sobic003G200200 Sobic006G165000--Sobic003G200200 Sobic006G165000--Sobic010G028800 Sobic004G145500 Sobic004G145500 Sobic006G165000--Sobic004G145500 Sobic009G126600 Sobic009G126600 Sobic006G165000--Sobic009G126600 Sobic006G165000--Sobic001G222500 Sobic006G032400 Sobic006G032400 Sobic006G165000--Sobic006G032400 Sobic001G155000--Sobic008G047800 Sobic002G006900 Sobic002G006900 Sobic001G155000--Sobic002G006900 Sobic001G155000--Sobic003G200200 Sobic009G040600 Sobic009G040600 Sobic001G155000--Sobic009G040600 Sobic001G155000--Sobic001G222500 Sobic007G011300 Sobic007G011300 Sobic001G155000--Sobic007G011300 Sobic008G153000 Sobic008G153000 Sobic001G155000--Sobic008G153000 Sobic001G155000--Sobic010G053800 Sobic001G155000--Sobic007G217000 Sobic006G222300 Sobic006G222300 Sobic009G083500--Sobic006G222300 Sobic010G136600 Sobic010G136600 Sobic009G083500--Sobic010G136600 Sobic009G083500--Sobic010G028800 Sobic007G065400 Sobic007G065400 Sobic009G083500--Sobic007G065400 Sobic002G191800 Sobic002G191800 Sobic009G083500--Sobic002G191800 Sobic003G372700 Sobic003G372700 Sobic009G083500--Sobic003G372700 Sobic010G069100 Sobic010G069100 Sobic009G083500--Sobic010G069100 Sobic003G170100 Sobic003G170100 Sobic009G083500--Sobic003G170100 Sobic009G083500--Sobic008G173900 Sobic009G210500 Sobic009G210500 Sobic001G407200--Sobic009G210500 Sobic008G162900 Sobic008G162900 Sobic001G407200--Sobic008G162900 Sobic005G013200 Sobic005G013200 Sobic001G407200--Sobic005G013200 Sobic001G407200--Sobic002G144933 Sobic010G129200 Sobic010G129200 Sobic001G407200--Sobic010G129200 Sobic010G277500 Sobic010G277500 Sobic001G407200--Sobic010G277500 Sobic009G126400 Sobic009G126400 Sobic001G407200--Sobic009G126400 Sobic001G407200--Sobic004G084300 Sobic001G407200--Sobic008G047800
Octagon: transcription factors


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