Gene annotation
Transcriptome id Sobic.002G103600.1
Synonym SETH2, Sb02g008800
Functional annotation glycosyl transferase, group 1 domain containing protein, expressed
UniProt C5X3H6
Pfam PF13439 PF00534
Panther DB PTHR12526 PTHR12526:SF232
NCBI CDD -
KEGG Orthology K03857; PIGA, phosphatidylinositol N-acetylglucosaminyltransferase subunit A
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G45100 : UDP-Glycosyltransferase superfamily protein
RAP-DB (Rice) LOC_Os07g16960.1 : glycosyl transferase, group 1 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a013629 , Zm00025a048152
Brachypodium KQK17126
Barley HORVU5Hr1G039740.16 , HORVU5Hr1G039740.17 , HORVU5Hr1G039740.14 , HORVU5Hr1G039740.15 , HORVU5Hr1G039740.12 , HORVU5Hr1G039740.13 , HORVU5Hr1G039740.10 , HORVU5Hr1G039740.11 , HORVU5Hr1G039740.18 , HORVU5Hr1G039740.19 , HORVU7Hr1G053310.19 , HORVU7Hr1G053310.18 , HORVU7Hr1G053310.11 , HORVU7Hr1G053310.10 , HORVU7Hr1G053310.13 , HORVU7Hr1G053310.12 , HORVU7Hr1G053310.15 , HORVU7Hr1G053310.14 , HORVU7Hr1G053310.17 , HORVU7Hr1G053310.16 , HORVU7Hr1G053310.8 , HORVU7Hr1G053310.4 , HORVU7Hr1G053310.1 , HORVU7Hr1G053310.3 , HORVU7Hr1G053310.2 , HORVU5Hr1G039740.29 , HORVU5Hr1G039740.28 , HORVU5Hr1G039740.27 , HORVU5Hr1G039740.26 , HORVU5Hr1G039740.25 , HORVU5Hr1G039740.24 , HORVU5Hr1G039740.23 , HORVU5Hr1G039740.22 , HORVU5Hr1G039740.21 , HORVU5Hr1G039740.20 , HORVU7Hr1G053310.23 , HORVU5Hr1G039740.4 , HORVU5Hr1G039740.5 , HORVU5Hr1G039740.6 , HORVU5Hr1G039740.7 , HORVU5Hr1G039740.1 , HORVU5Hr1G039740.2 , HORVU5Hr1G039740.3 , HORVU5Hr1G039740.8 , HORVU5Hr1G039740.9 , HORVU7Hr1G053310.9 , HORVU7Hr1G053310.5 , HORVU7Hr1G053310.7 , HORVU7Hr1G053310.6 , HORVU5Hr1G039740.30 , HORVU5Hr1G039740.31 , HORVU7Hr1G053310.20 , HORVU7Hr1G053310.21 , HORVU7Hr1G053310.22
Wheat TraesCS5D02G131700 , TraesCS5D02G131700 , TraesCS5B02G123400 , TraesCS3B02G367800 , TraesCS3B02G367800 , TraesCS3B02G367800 , TraesCS3D02G329700 , TraesCS3A02G336700 , TraesCS5A02G123800 , TraesCS5A02G123800 , TraesCS5A02G123800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G444800 expressed protein -
2 Sobic.005G013200 BAH domain containing protein, expressed -
3 Sobic.K028600 expressed protein -
4 Sobic.003G059750 - K11797: PHIP, PH-interacting protein
5 Sobic.001G311500 N-acetylglucosaminyl transferase component, putative, expressed K03860: PIGQ, phosphatidylinositol N-acetylglucosaminyltransferase subunit Q
6 Sobic.009G247400 PX domain containing protein, putative, expressed K17925: sorting nexin-13
7 Sobic.002G408200 sec8 exocyst complex component specific domain containing protein, expressed K06111: EXOC4, exocyst complex component 4
8 Sobic.008G028700 SET domain containing protein, expressed -
9 Sobic.007G042400 HEAT repeat family protein, putative, expressed -
10 Sobic.006G116100 RNA recognition motif containing protein, putative, expressed -
11 Sobic.010G279450 - K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
12 Sobic.008G149800 histone acetyltransferase HAC5, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
13 Sobic.007G017800 OsFBX142 - F-box domain containing protein, expressed -
14 Sobic.007G103600 protein of unknown function DUF1296 domain containing protein, expressed -
15 Sobic.001G363500 DIRP family protein, putative, expressed -
16 Sobic.002G260400 - -
17 Sobic.003G052200 G-patch domain containing protein, expressed -
18 Sobic.001G094600 pentatricopeptide, putative, expressed -
19 Sobic.010G129200 - -
20 Sobic.008G162900 peroxisome assembly protein, putative, expressed K06664: PEX2, peroxin-2


Gene co-expression network
sample Sobic002G103600 Sobic002G103600 Sobic003G444800 Sobic003G444800 Sobic002G103600--Sobic003G444800 Sobic005G013200 Sobic005G013200 Sobic002G103600--Sobic005G013200 SobicK028600 SobicK028600 Sobic002G103600--SobicK028600 Sobic003G059750 Sobic003G059750 Sobic002G103600--Sobic003G059750 Sobic001G311500 Sobic001G311500 Sobic002G103600--Sobic001G311500 Sobic009G247400 Sobic009G247400 Sobic002G103600--Sobic009G247400 Sobic002G408200 Sobic002G408200 Sobic002G103600--Sobic002G408200 Sobic008G028700 Sobic008G028700 Sobic002G103600--Sobic008G028700 Sobic007G042400 Sobic007G042400 Sobic002G103600--Sobic007G042400 Sobic003G444800--SobicK028600 Sobic003G444800--Sobic003G059750 Sobic003G444800--Sobic002G103600 Sobic004G357100 Sobic004G357100 Sobic003G444800--Sobic004G357100 Sobic003G444800--Sobic007G042400 Sobic002G112700 Sobic002G112700 Sobic003G444800--Sobic002G112700 Sobic010G279450 Sobic010G279450 Sobic003G444800--Sobic010G279450 Sobic006G234700 Sobic006G234700 Sobic003G444800--Sobic006G234700 Sobic001G376200 Sobic001G376200 Sobic003G444800--Sobic001G376200 Sobic005G013200--Sobic002G103600 Sobic010G129200 Sobic010G129200 Sobic005G013200--Sobic010G129200 Sobic008G162900 Sobic008G162900 Sobic005G013200--Sobic008G162900 Sobic001G407200 Sobic001G407200 Sobic005G013200--Sobic001G407200 Sobic001G222500 Sobic001G222500 Sobic005G013200--Sobic001G222500 Sobic005G013200--Sobic002G408200 Sobic005G013200--Sobic008G028700 Sobic001G251700 Sobic001G251700 Sobic005G013200--Sobic001G251700 Sobic004G084300 Sobic004G084300 Sobic005G013200--Sobic004G084300 SobicK028600--Sobic003G444800 SobicK028600--Sobic004G357100 Sobic001G308400 Sobic001G308400 SobicK028600--Sobic001G308400 SobicK028600--Sobic002G103600 SobicK028600--Sobic007G042400 Sobic006G116100 Sobic006G116100 SobicK028600--Sobic006G116100 Sobic003G043000 Sobic003G043000 SobicK028600--Sobic003G043000 SobicK028600--Sobic006G234700 Sobic002G063900 Sobic002G063900 SobicK028600--Sobic002G063900 Sobic007G103600 Sobic007G103600 Sobic003G059750--Sobic007G103600 Sobic005G207500 Sobic005G207500 Sobic003G059750--Sobic005G207500 Sobic005G112300 Sobic005G112300 Sobic003G059750--Sobic005G112300 Sobic003G059750--Sobic010G279450 Sobic002G404700 Sobic002G404700 Sobic003G059750--Sobic002G404700 Sobic003G059750--Sobic003G444800 Sobic003G059750--Sobic001G311500 Sobic002G405800 Sobic002G405800 Sobic003G059750--Sobic002G405800 Sobic002G071500 Sobic002G071500 Sobic003G059750--Sobic002G071500 Sobic010G139000 Sobic010G139000 Sobic001G311500--Sobic010G139000 Sobic001G311500--Sobic009G247400 Sobic001G311500--Sobic005G112300 Sobic001G311500--Sobic003G059750 Sobic008G009700 Sobic008G009700 Sobic001G311500--Sobic008G009700 Sobic004G314000 Sobic004G314000 Sobic001G311500--Sobic004G314000 Sobic001G311500--Sobic010G279450 Sobic001G311500--Sobic008G028700 Sobic001G363500 Sobic001G363500 Sobic001G311500--Sobic001G363500 Sobic009G247400--Sobic001G311500 Sobic009G247400--Sobic010G279450 Sobic009G260500 Sobic009G260500 Sobic009G247400--Sobic009G260500 Sobic004G009600 Sobic004G009600 Sobic009G247400--Sobic004G009600 Sobic001G214600 Sobic001G214600 Sobic009G247400--Sobic001G214600 Sobic009G247400--Sobic001G363500 Sobic001G219600 Sobic001G219600 Sobic009G247400--Sobic001G219600 Sobic002G317200 Sobic002G317200 Sobic009G247400--Sobic002G317200 Sobic009G247400--Sobic004G314000 Sobic002G408200--Sobic008G028700 Sobic002G408200--Sobic005G013200 Sobic002G408200--Sobic002G103600 Sobic007G008900 Sobic007G008900 Sobic002G408200--Sobic007G008900 Sobic003G052200 Sobic003G052200 Sobic002G408200--Sobic003G052200 Sobic001G161800 Sobic001G161800 Sobic002G408200--Sobic001G161800 Sobic002G408200--Sobic010G279450 Sobic002G408200--Sobic003G059750 Sobic001G451400 Sobic001G451400 Sobic002G408200--Sobic001G451400 Sobic008G028700--Sobic010G279450 Sobic009G040600 Sobic009G040600 Sobic008G028700--Sobic009G040600 Sobic008G028700--Sobic004G009600 Sobic004G258700 Sobic004G258700 Sobic008G028700--Sobic004G258700 Sobic007G065400 Sobic007G065400 Sobic008G028700--Sobic007G065400 Sobic008G028700--Sobic010G139000 Sobic002G006900 Sobic002G006900 Sobic008G028700--Sobic002G006900 Sobic002G145101 Sobic002G145101 Sobic008G028700--Sobic002G145101 Sobic008G113100 Sobic008G113100 Sobic008G028700--Sobic008G113100 Sobic007G042400--Sobic003G444800 Sobic007G042400--Sobic006G234700 Sobic009G084900 Sobic009G084900 Sobic007G042400--Sobic009G084900 Sobic003G152400 Sobic003G152400 Sobic007G042400--Sobic003G152400 Sobic010G059500 Sobic010G059500 Sobic007G042400--Sobic010G059500 Sobic007G042400--Sobic009G247400 Sobic007G042400--Sobic003G059750 Sobic007G042400--Sobic004G357100 Sobic007G042400--Sobic001G311500
Octagon: transcription factors


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