Gene annotation
Transcriptome id Sobic.007G017800.1,Sobic.007G017800.2
Synonym Sb07g001520
Functional annotation OsFBX142 - F-box domain containing protein, expressed
UniProt A0A1Z5R7M9 , A0A1B6PF14
Pfam PF08387
Panther DB PTHR32212 PTHR32212:SF111
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G41840 : F-box/RNI-like superfamily protein
RAP-DB (Rice) LOC_Os04g40370.1,LOC_Os04g40370.2 : OsFBX142 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a026336 , Zm00025a026334
Brachypodium KQJ92238 , KQJ92239 , KQJ92237
Barley -
Wheat TraesCS6A02G046000 , TraesCS6D02G053200 , TraesCS6B02G062100 , TraesCS6A02G048500 , TraesCSU02G107500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G405600 basic helix-loop-helix, putative, expressed K10863: aprataxin
2 Sobic.002G103600 glycosyl transferase, group 1 domain containing protein, expressed K03857: PIGA, phosphatidylinositol N-acetylglucosaminyltransferase subunit A
3 Sobic.003G143200 expressed protein -
4 Sobic.004G185800 expressed protein -
5 Sobic.010G034100 GTP-binding protein GUF1, putative, expressed -
6 Sobic.008G162900 peroxisome assembly protein, putative, expressed K06664: PEX2, peroxin-2
7 Sobic.009G177500 CCR4-NOT transcription factor, putative, expressed K12605: CNOT2, CCR4-NOT transcription complex subunit 2
8 Sobic.006G234700 FGGY family of carbohydrate kinases, putative, expressed -
9 Sobic.008G063300 exonuclease, putative, expressed K14570: REX1, REXO1, RNA exonuclease 1
10 Sobic.002G260400 - -
11 Sobic.009G192300 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
12 Sobic.006G216100 expressed protein -
13 Sobic.005G138300 retinoblastoma-related protein-like, putative, expressed K04681: retinoblastoma-like protein 1
14 Sobic.010G059500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12818: DHX8, ATP-dependent RNA helicase DHX8/PRP22
15 Sobic.007G105900 IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed -
16 Sobic.001G384300 myb-like DNA-binding domain containing protein, expressed -
17 Sobic.002G343901 - -
18 Sobic.009G228000 ubiquitin-conjugating enzyme domain containing protein, expressed K10581: ubiquitin-conjugating enzyme E2 O
19 Sobic.003G120300 NAD dependent epimerase/dehydratase family protein, putative, expressed -
20 Sobic.009G124700 endonuclease/exonuclease/phosphatase family domain containing protein, expressed K12603: CNOT6, CCR4-NOT transcription complex subunit 6


Gene co-expression network
sample Sobic007G017800 Sobic007G017800 Sobic001G405600 Sobic001G405600 Sobic007G017800--Sobic001G405600 Sobic002G103600 Sobic002G103600 Sobic007G017800--Sobic002G103600 Sobic003G143200 Sobic003G143200 Sobic007G017800--Sobic003G143200 Sobic004G185800 Sobic004G185800 Sobic007G017800--Sobic004G185800 Sobic010G034100 Sobic010G034100 Sobic007G017800--Sobic010G034100 Sobic008G162900 Sobic008G162900 Sobic007G017800--Sobic008G162900 Sobic009G177500 Sobic009G177500 Sobic007G017800--Sobic009G177500 Sobic006G234700 Sobic006G234700 Sobic007G017800--Sobic006G234700 Sobic008G063300 Sobic008G063300 Sobic007G017800--Sobic008G063300 Sobic001G405600--Sobic007G017800 Sobic001G405600--Sobic010G034100 Sobic007G105900 Sobic007G105900 Sobic001G405600--Sobic007G105900 Sobic010G059500 Sobic010G059500 Sobic001G405600--Sobic010G059500 Sobic001G405600--Sobic003G143200 Sobic001G405600--Sobic006G234700 Sobic006G039400 Sobic006G039400 Sobic001G405600--Sobic006G039400 Sobic003G296900 Sobic003G296900 Sobic001G405600--Sobic003G296900 Sobic001G035200 Sobic001G035200 Sobic001G405600--Sobic001G035200 Sobic003G444800 Sobic003G444800 Sobic002G103600--Sobic003G444800 Sobic005G013200 Sobic005G013200 Sobic002G103600--Sobic005G013200 SobicK028600 SobicK028600 Sobic002G103600--SobicK028600 Sobic003G059750 Sobic003G059750 Sobic002G103600--Sobic003G059750 Sobic001G311500 Sobic001G311500 Sobic002G103600--Sobic001G311500 Sobic009G247400 Sobic009G247400 Sobic002G103600--Sobic009G247400 Sobic002G408200 Sobic002G408200 Sobic002G103600--Sobic002G408200 Sobic008G028700 Sobic008G028700 Sobic002G103600--Sobic008G028700 Sobic007G042400 Sobic007G042400 Sobic002G103600--Sobic007G042400 Sobic004G092500 Sobic004G092500 Sobic003G143200--Sobic004G092500 Sobic003G143200--Sobic001G405600 Sobic003G143200--Sobic007G017800 Sobic002G347000 Sobic002G347000 Sobic003G143200--Sobic002G347000 Sobic007G132100 Sobic007G132100 Sobic003G143200--Sobic007G132100 Sobic003G443100 Sobic003G443100 Sobic003G143200--Sobic003G443100 Sobic005G138300 Sobic005G138300 Sobic003G143200--Sobic005G138300 Sobic007G125000 Sobic007G125000 Sobic003G143200--Sobic007G125000 Sobic002G260400 Sobic002G260400 Sobic003G143200--Sobic002G260400 Sobic006G041600 Sobic006G041600 Sobic004G185800--Sobic006G041600 Sobic001G433800 Sobic001G433800 Sobic004G185800--Sobic001G433800 Sobic003G398700 Sobic003G398700 Sobic004G185800--Sobic003G398700 Sobic003G188400 Sobic003G188400 Sobic004G185800--Sobic003G188400 Sobic004G185800--Sobic008G063300 Sobic006G096900 Sobic006G096900 Sobic004G185800--Sobic006G096900 Sobic006G252900 Sobic006G252900 Sobic004G185800--Sobic006G252900 Sobic003G168100 Sobic003G168100 Sobic004G185800--Sobic003G168100 Sobic002G425500 Sobic002G425500 Sobic004G185800--Sobic002G425500 Sobic010G034100--Sobic010G059500 Sobic010G034100--Sobic001G035200 Sobic009G192300 Sobic009G192300 Sobic010G034100--Sobic009G192300 Sobic010G034100--Sobic001G405600 Sobic009G084900 Sobic009G084900 Sobic010G034100--Sobic009G084900 Sobic001G283600 Sobic001G283600 Sobic010G034100--Sobic001G283600 Sobic001G020000 Sobic001G020000 Sobic010G034100--Sobic001G020000 Sobic010G034100--Sobic006G252900 Sobic002G227500 Sobic002G227500 Sobic010G034100--Sobic002G227500 Sobic003G184699 Sobic003G184699 Sobic008G162900--Sobic003G184699 Sobic009G126400 Sobic009G126400 Sobic008G162900--Sobic009G126400 Sobic008G047800 Sobic008G047800 Sobic008G162900--Sobic008G047800 Sobic001G407200 Sobic001G407200 Sobic008G162900--Sobic001G407200 Sobic008G162900--Sobic005G013200 Sobic003G052200 Sobic003G052200 Sobic008G162900--Sobic003G052200 Sobic006G216800 Sobic006G216800 Sobic008G162900--Sobic006G216800 Sobic001G222500 Sobic001G222500 Sobic008G162900--Sobic001G222500 Sobic002G343901 Sobic002G343901 Sobic008G162900--Sobic002G343901 Sobic009G177500--Sobic001G433800 Sobic001G227200 Sobic001G227200 Sobic009G177500--Sobic001G227200 Sobic005G112300 Sobic005G112300 Sobic009G177500--Sobic005G112300 Sobic004G140600 Sobic004G140600 Sobic009G177500--Sobic004G140600 Sobic009G177500--Sobic008G047800 Sobic010G112100 Sobic010G112100 Sobic009G177500--Sobic010G112100 Sobic007G090430 Sobic007G090430 Sobic009G177500--Sobic007G090430 Sobic001G392300 Sobic001G392300 Sobic009G177500--Sobic001G392300 Sobic009G177500--Sobic002G343901 Sobic004G096400 Sobic004G096400 Sobic006G234700--Sobic004G096400 Sobic006G234700--Sobic010G059500 Sobic006G234700--Sobic009G192300 Sobic006G234700--Sobic007G042400 Sobic006G234700--Sobic003G444800 Sobic001G493200 Sobic001G493200 Sobic006G234700--Sobic001G493200 Sobic006G234700--Sobic009G084900 Sobic006G234700--Sobic001G433800 Sobic002G083500 Sobic002G083500 Sobic006G234700--Sobic002G083500 Sobic008G063300--Sobic004G140600 Sobic008G063300--Sobic001G433800 Sobic008G063300--Sobic006G096900 Sobic003G360400 Sobic003G360400 Sobic008G063300--Sobic003G360400 Sobic003G095900 Sobic003G095900 Sobic008G063300--Sobic003G095900 Sobic010G123600 Sobic010G123600 Sobic008G063300--Sobic010G123600 Sobic008G063300--Sobic003G188400 Sobic008G063300--Sobic009G177500 Sobic008G063300--Sobic010G059500
Octagon: transcription factors


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