Gene annotation
Transcriptome id Sobic.003G143200.1,Sobic.003G143200.7,Sobic.003G143200.6,Sobic.003G143200.5,Sobic.003G143200.3,Sobic.003G143200.4
Synonym Sb03g012380
Functional annotation expressed protein
UniProt C5XI49 , A0A1B6Q366 , A0A1W0VXD4 , A0A1W0VXB2 , A0A1B6Q342 , A0A1W0VXC0
Pfam -
Panther DB PTHR34188 PTHR34188:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G17120 : -
RAP-DB (Rice) LOC_Os01g19410.3 : expressed protein
MaizeGDB (Corn) Zm00025a036116
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G092500 OsPP2Ac-1 - Phosphatase 2A isoform 1 belonging to family 1, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
2 Sobic.001G405600 basic helix-loop-helix, putative, expressed K10863: aprataxin
3 Sobic.007G017800 OsFBX142 - F-box domain containing protein, expressed -
4 Sobic.002G347000 WD domain, G-beta repeat domain containing protein, expressed K14963: WDR5, SWD3, COMPASS component SWD3
5 Sobic.007G132100 myrosinase precursor, putative, expressed -
6 Sobic.003G443100 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
7 Sobic.005G138300 retinoblastoma-related protein-like, putative, expressed K04681: retinoblastoma-like protein 1
8 Sobic.007G125000 OsAPRL4 adenosine 5\'-phosphosulfate reductase-like OsAPRL4, expressed -
9 Sobic.002G260400 - -
10 Sobic.001G493200 endonuclease/exonuclease/phosphatase family domain containing protein, expressed K12603: CNOT6, CCR4-NOT transcription complex subunit 6
11 Sobic.006G180000 syntaxin-18, putative, expressed K08492: syntaxin 18
12 Sobic.009G192300 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
13 Sobic.009G095100 expressed protein -
14 Sobic.006G041600 WD domain, G-beta repeat domain containing protein, expressed K17985: activating molecule in BECN1-regulated autophagy protein 1
15 Sobic.007G075900 SKP1, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
16 Sobic.006G195700 WD domain, G-beta repeat domain containing protein, expressed K14962: WDR82, SWD2, COMPASS component SWD2
17 Sobic.008G162900 peroxisome assembly protein, putative, expressed K06664: PEX2, peroxin-2
18 Sobic.010G140400 poor homologous synapsis 1 protein, putative, expressed -
19 Sobic.009G092400 zinc finger, C3HC4 type family protein, expressed -
20 Sobic.009G124700 endonuclease/exonuclease/phosphatase family domain containing protein, expressed K12603: CNOT6, CCR4-NOT transcription complex subunit 6


Gene co-expression network
sample Sobic003G143200 Sobic003G143200 Sobic004G092500 Sobic004G092500 Sobic003G143200--Sobic004G092500 Sobic001G405600 Sobic001G405600 Sobic003G143200--Sobic001G405600 Sobic007G017800 Sobic007G017800 Sobic003G143200--Sobic007G017800 Sobic002G347000 Sobic002G347000 Sobic003G143200--Sobic002G347000 Sobic007G132100 Sobic007G132100 Sobic003G143200--Sobic007G132100 Sobic003G443100 Sobic003G443100 Sobic003G143200--Sobic003G443100 Sobic005G138300 Sobic005G138300 Sobic003G143200--Sobic005G138300 Sobic007G125000 Sobic007G125000 Sobic003G143200--Sobic007G125000 Sobic002G260400 Sobic002G260400 Sobic003G143200--Sobic002G260400 Sobic004G092500--Sobic007G132100 Sobic001G493200 Sobic001G493200 Sobic004G092500--Sobic001G493200 Sobic010G223300 Sobic010G223300 Sobic004G092500--Sobic010G223300 Sobic004G092500--Sobic003G143200 Sobic010G020400 Sobic010G020400 Sobic004G092500--Sobic010G020400 Sobic004G257100 Sobic004G257100 Sobic004G092500--Sobic004G257100 Sobic004G039600 Sobic004G039600 Sobic004G092500--Sobic004G039600 Sobic006G077200 Sobic006G077200 Sobic004G092500--Sobic006G077200 Sobic007G167900 Sobic007G167900 Sobic004G092500--Sobic007G167900 Sobic001G405600--Sobic007G017800 Sobic010G034100 Sobic010G034100 Sobic001G405600--Sobic010G034100 Sobic007G105900 Sobic007G105900 Sobic001G405600--Sobic007G105900 Sobic010G059500 Sobic010G059500 Sobic001G405600--Sobic010G059500 Sobic001G405600--Sobic003G143200 Sobic006G234700 Sobic006G234700 Sobic001G405600--Sobic006G234700 Sobic006G039400 Sobic006G039400 Sobic001G405600--Sobic006G039400 Sobic003G296900 Sobic003G296900 Sobic001G405600--Sobic003G296900 Sobic001G035200 Sobic001G035200 Sobic001G405600--Sobic001G035200 Sobic007G017800--Sobic001G405600 Sobic002G103600 Sobic002G103600 Sobic007G017800--Sobic002G103600 Sobic007G017800--Sobic003G143200 Sobic004G185800 Sobic004G185800 Sobic007G017800--Sobic004G185800 Sobic007G017800--Sobic010G034100 Sobic008G162900 Sobic008G162900 Sobic007G017800--Sobic008G162900 Sobic009G177500 Sobic009G177500 Sobic007G017800--Sobic009G177500 Sobic007G017800--Sobic006G234700 Sobic008G063300 Sobic008G063300 Sobic007G017800--Sobic008G063300 Sobic002G347000--Sobic003G143200 Sobic005G160400 Sobic005G160400 Sobic002G347000--Sobic005G160400 Sobic001G309400 Sobic001G309400 Sobic002G347000--Sobic001G309400 Sobic006G180000 Sobic006G180000 Sobic002G347000--Sobic006G180000 Sobic007G115200 Sobic007G115200 Sobic002G347000--Sobic007G115200 Sobic006G199200 Sobic006G199200 Sobic002G347000--Sobic006G199200 Sobic002G347000--Sobic007G167900 Sobic001G281600 Sobic001G281600 Sobic002G347000--Sobic001G281600 Sobic008G076800 Sobic008G076800 Sobic002G347000--Sobic008G076800 Sobic007G218000 Sobic007G218000 Sobic007G132100--Sobic007G218000 Sobic004G072100 Sobic004G072100 Sobic007G132100--Sobic004G072100 Sobic007G132100--Sobic004G039600 Sobic004G178200 Sobic004G178200 Sobic007G132100--Sobic004G178200 Sobic006G131000 Sobic006G131000 Sobic007G132100--Sobic006G131000 Sobic006G012500 Sobic006G012500 Sobic007G132100--Sobic006G012500 Sobic009G044800 Sobic009G044800 Sobic007G132100--Sobic009G044800 Sobic008G099800 Sobic008G099800 Sobic007G132100--Sobic008G099800 Sobic010G204400 Sobic010G204400 Sobic007G132100--Sobic010G204400 Sobic002G310200 Sobic002G310200 Sobic003G443100--Sobic002G310200 Sobic003G184699 Sobic003G184699 Sobic003G443100--Sobic003G184699 Sobic008G047800 Sobic008G047800 Sobic003G443100--Sobic008G047800 Sobic001G441400 Sobic001G441400 Sobic003G443100--Sobic001G441400 Sobic009G245800 Sobic009G245800 Sobic003G443100--Sobic009G245800 Sobic005G027400 Sobic005G027400 Sobic003G443100--Sobic005G027400 Sobic003G141500 Sobic003G141500 Sobic003G443100--Sobic003G141500 Sobic001G363500 Sobic001G363500 Sobic003G443100--Sobic001G363500 Sobic010G053800 Sobic010G053800 Sobic003G443100--Sobic010G053800 Sobic003G444800 Sobic003G444800 Sobic005G138300--Sobic003G444800 Sobic005G138300--Sobic007G218000 Sobic001G114000 Sobic001G114000 Sobic005G138300--Sobic001G114000 Sobic009G124700 Sobic009G124700 Sobic005G138300--Sobic009G124700 Sobic005G138300--Sobic002G103600 SobicK028600 SobicK028600 Sobic005G138300--SobicK028600 Sobic002G112700 Sobic002G112700 Sobic005G138300--Sobic002G112700 Sobic004G265500 Sobic004G265500 Sobic005G138300--Sobic004G265500 Sobic002G164300 Sobic002G164300 Sobic005G138300--Sobic002G164300 Sobic007G125000--Sobic007G218000 Sobic007G125000--Sobic002G112700 Sobic009G092400 Sobic009G092400 Sobic007G125000--Sobic009G092400 Sobic007G125000--Sobic007G132100 Sobic009G192300 Sobic009G192300 Sobic007G125000--Sobic009G192300 Sobic007G125000--Sobic002G164300 Sobic007G008900 Sobic007G008900 Sobic007G125000--Sobic007G008900 Sobic009G126600 Sobic009G126600 Sobic007G125000--Sobic009G126600 Sobic007G125000--Sobic004G072100 Sobic008G173100 Sobic008G173100 Sobic002G260400--Sobic008G173100 Sobic002G056701 Sobic002G056701 Sobic002G260400--Sobic002G056701 Sobic002G063900 Sobic002G063900 Sobic002G260400--Sobic002G063900 Sobic002G370900 Sobic002G370900 Sobic002G260400--Sobic002G370900 Sobic006G116100 Sobic006G116100 Sobic002G260400--Sobic006G116100 Sobic008G153000 Sobic008G153000 Sobic002G260400--Sobic008G153000 Sobic010G236400 Sobic010G236400 Sobic002G260400--Sobic010G236400 Sobic002G083500 Sobic002G083500 Sobic002G260400--Sobic002G083500 Sobic010G245000 Sobic010G245000 Sobic002G260400--Sobic010G245000
Octagon: transcription factors


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