Gene annotation
Transcriptome id Sobic.009G095100.2
Synonym Sb09g012510
Functional annotation expressed protein
UniProt A0A1Z5R1S5
Pfam -
Panther DB PTHR31016 PTHR31016:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G01970 : -
RAP-DB (Rice) LOC_Os05g25070.1 : expressed protein
MaizeGDB (Corn) Zm00025a037601
Brachypodium -
Barley -
Wheat TraesCS1D02G124900 , TraesCS1D02G124900 , TraesCS1A02G128300 , TraesCS1B02G146700 , TraesCS1B02G146700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G522600 PHD-finger domain containing protein, putative, expressed -
2 Sobic.007G061000 mitotic checkpoint protein, putative, expressed K14298: RAE1, mRNA export factor
3 Sobic.003G029100 frigida, putative, expressed -
4 Sobic.003G143200 expressed protein -
5 Sobic.009G179700 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
6 Sobic.008G112800 pre-mRNA-processing factor 6, putative, expressed K12855: PRPF6, pre-mRNA-processing factor 6
7 Sobic.004G266900 AAA-type ATPase family protein, putative, expressed K17681: ATPase family AAA domain-containing protein 3A/B
8 Sobic.008G153500 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
9 Sobic.004G092500 OsPP2Ac-1 - Phosphatase 2A isoform 1 belonging to family 1, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
10 Sobic.007G078500 serine/threonine-protein kinase HT1, putative, expressed -
11 Sobic.001G392300 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12820: DHX15, pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43
12 Sobic.008G002500 RCD1, putative, expressed -
13 Sobic.007G203200 RNA recognition motif containing protein, putative, expressed K13201: TIA1, nucleolysin TIA-1/TIAR
14 Sobic.006G118700 MYB family transcription factor, putative, expressed -
15 Sobic.010G236400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K12847: USP39, U4/U6.U5 tri-snRNP-associated protein 2
16 Sobic.007G071200 KH domain-containing protein, putative, expressed K13162: poly(rC)-binding protein 2
17 Sobic.002G361400 frigida, putative, expressed -
18 Sobic.001G356600 KH domain-containing protein, putative, expressed K13162: poly(rC)-binding protein 2
19 Sobic.001G354600 SAP domain containing protein, expressed K12875: ACIN1, apoptotic chromatin condensation inducer in the nucleus
20 Sobic.009G177500 CCR4-NOT transcription factor, putative, expressed K12605: CNOT2, CCR4-NOT transcription complex subunit 2


Gene co-expression network
sample Sobic009G095100 Sobic009G095100 Sobic001G522600 Sobic001G522600 Sobic009G095100--Sobic001G522600 Sobic007G061000 Sobic007G061000 Sobic009G095100--Sobic007G061000 Sobic003G029100 Sobic003G029100 Sobic009G095100--Sobic003G029100 Sobic003G143200 Sobic003G143200 Sobic009G095100--Sobic003G143200 Sobic009G179700 Sobic009G179700 Sobic009G095100--Sobic009G179700 Sobic008G112800 Sobic008G112800 Sobic009G095100--Sobic008G112800 Sobic004G266900 Sobic004G266900 Sobic009G095100--Sobic004G266900 Sobic008G153500 Sobic008G153500 Sobic009G095100--Sobic008G153500 Sobic004G092500 Sobic004G092500 Sobic009G095100--Sobic004G092500 Sobic001G522600--Sobic007G061000 Sobic001G392300 Sobic001G392300 Sobic001G522600--Sobic001G392300 Sobic008G002500 Sobic008G002500 Sobic001G522600--Sobic008G002500 Sobic010G236400 Sobic010G236400 Sobic001G522600--Sobic010G236400 Sobic001G522600--Sobic009G095100 Sobic008G014500 Sobic008G014500 Sobic001G522600--Sobic008G014500 Sobic006G200700 Sobic006G200700 Sobic001G522600--Sobic006G200700 Sobic009G044800 Sobic009G044800 Sobic001G522600--Sobic009G044800 Sobic007G183900 Sobic007G183900 Sobic001G522600--Sobic007G183900 Sobic007G061000--Sobic001G392300 Sobic007G061000--Sobic001G522600 Sobic009G177500 Sobic009G177500 Sobic007G061000--Sobic009G177500 Sobic004G084300 Sobic004G084300 Sobic007G061000--Sobic004G084300 Sobic008G047800 Sobic008G047800 Sobic007G061000--Sobic008G047800 Sobic006G118700 Sobic006G118700 Sobic007G061000--Sobic006G118700 Sobic007G061000--Sobic009G179700 Sobic002G134200 Sobic002G134200 Sobic007G061000--Sobic002G134200 Sobic007G157000 Sobic007G157000 Sobic007G061000--Sobic007G157000 Sobic002G126500 Sobic002G126500 Sobic003G029100--Sobic002G126500 Sobic003G029100--Sobic009G179700 Sobic007G203200 Sobic007G203200 Sobic003G029100--Sobic007G203200 Sobic003G029100--Sobic010G236400 Sobic001G375700 Sobic001G375700 Sobic003G029100--Sobic001G375700 Sobic001G356600 Sobic001G356600 Sobic003G029100--Sobic001G356600 Sobic003G029100--Sobic007G061000 Sobic006G173100 Sobic006G173100 Sobic003G029100--Sobic006G173100 Sobic003G029100--Sobic006G118700 Sobic003G143200--Sobic004G092500 Sobic001G405600 Sobic001G405600 Sobic003G143200--Sobic001G405600 Sobic007G017800 Sobic007G017800 Sobic003G143200--Sobic007G017800 Sobic002G347000 Sobic002G347000 Sobic003G143200--Sobic002G347000 Sobic007G132100 Sobic007G132100 Sobic003G143200--Sobic007G132100 Sobic003G443100 Sobic003G443100 Sobic003G143200--Sobic003G443100 Sobic005G138300 Sobic005G138300 Sobic003G143200--Sobic005G138300 Sobic007G125000 Sobic007G125000 Sobic003G143200--Sobic007G125000 Sobic002G260400 Sobic002G260400 Sobic003G143200--Sobic002G260400 Sobic002G350300 Sobic002G350300 Sobic009G179700--Sobic002G350300 Sobic009G179700--Sobic001G356600 Sobic007G078600 Sobic007G078600 Sobic009G179700--Sobic007G078600 Sobic010G018700 Sobic010G018700 Sobic009G179700--Sobic010G018700 Sobic008G179700 Sobic008G179700 Sobic009G179700--Sobic008G179700 Sobic007G078500 Sobic007G078500 Sobic009G179700--Sobic007G078500 Sobic009G179700--Sobic003G029100 Sobic009G179700--Sobic007G061000 Sobic001G512700 Sobic001G512700 Sobic009G179700--Sobic001G512700 Sobic004G274200 Sobic004G274200 Sobic008G112800--Sobic004G274200 Sobic008G112800--Sobic010G236400 Sobic008G112800--Sobic001G392300 Sobic008G112800--Sobic002G126500 Sobic008G112800--Sobic009G044800 Sobic008G112800--Sobic007G132100 Sobic004G257100 Sobic004G257100 Sobic008G112800--Sobic004G257100 Sobic008G112800--Sobic008G179700 Sobic001G124200 Sobic001G124200 Sobic008G112800--Sobic001G124200 Sobic006G014100 Sobic006G014100 Sobic004G266900--Sobic006G014100 Sobic001G395100 Sobic001G395100 Sobic004G266900--Sobic001G395100 Sobic004G266900--Sobic009G095100 Sobic006G240100 Sobic006G240100 Sobic004G266900--Sobic006G240100 Sobic004G155600 Sobic004G155600 Sobic004G266900--Sobic004G155600 Sobic006G121300 Sobic006G121300 Sobic004G266900--Sobic006G121300 Sobic007G091600 Sobic007G091600 Sobic004G266900--Sobic007G091600 Sobic007G071200 Sobic007G071200 Sobic004G266900--Sobic007G071200 Sobic007G075900 Sobic007G075900 Sobic004G266900--Sobic007G075900 Sobic007G166400 Sobic007G166400 Sobic008G153500--Sobic007G166400 Sobic006G049700 Sobic006G049700 Sobic008G153500--Sobic006G049700 Sobic002G361400 Sobic002G361400 Sobic008G153500--Sobic002G361400 Sobic006G010000 Sobic006G010000 Sobic008G153500--Sobic006G010000 Sobic006G101700 Sobic006G101700 Sobic008G153500--Sobic006G101700 Sobic008G153500--Sobic009G095100 Sobic008G153500--Sobic009G179700 Sobic009G222500 Sobic009G222500 Sobic008G153500--Sobic009G222500 Sobic004G115350 Sobic004G115350 Sobic008G153500--Sobic004G115350 Sobic004G092500--Sobic007G132100 Sobic001G493200 Sobic001G493200 Sobic004G092500--Sobic001G493200 Sobic010G223300 Sobic010G223300 Sobic004G092500--Sobic010G223300 Sobic004G092500--Sobic003G143200 Sobic010G020400 Sobic010G020400 Sobic004G092500--Sobic010G020400 Sobic004G092500--Sobic004G257100 Sobic004G039600 Sobic004G039600 Sobic004G092500--Sobic004G039600 Sobic006G077200 Sobic006G077200 Sobic004G092500--Sobic006G077200 Sobic007G167900 Sobic007G167900 Sobic004G092500--Sobic007G167900
Octagon: transcription factors


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