Gene annotation
Transcriptome id Sobic.009G179700.1
Synonym Sb09g024010, SUVH1
Functional annotation histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed
UniProt C5Z079
Pfam PF05033 PF00856 PF02182
Panther DB PTHR22884 PTHR22884:SF372
NCBI CDD KOG1082; Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing
KEGG Orthology K11420; [histone H3]-lysine9 N-trimethyltransferase EHMT
Gene Ontology GO:0018024; histone-lysine N-methyltransferase activity GO:0008270zinc ion binding GO:0005634nucleus GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT1G73100 : SU(VAR)3-9 homolog 3
RAP-DB (Rice) LOC_Os05g41172.2 : histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed
MaizeGDB (Corn) Zm00025a037831 , Zm00025a044070
Brachypodium KQJ89478 , KQJ89479
Barley HORVU0Hr1G001190.4 , HORVU0Hr1G001190.3 , HORVU0Hr1G001190.2 , HORVU0Hr1G001190.1 , HORVU1Hr1G068460.1
Wheat -
Populus -


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cDNA sequences
Sobic.009G179700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G350300 gamma response I protein, putative, expressed K13096: splicing factor 4
2 Sobic.001G356600 KH domain-containing protein, putative, expressed K13162: poly(rC)-binding protein 2
3 Sobic.007G078600 YT521-B, putative, expressed -
4 Sobic.010G018700 H-BTB4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed -
5 Sobic.008G179700 TATA-binding protein, putative, expressed K03120: TBP, transcription initiation factor TFIID TATA-box-binding protein
6 Sobic.007G078500 serine/threonine-protein kinase HT1, putative, expressed -
7 Sobic.003G029100 frigida, putative, expressed -
8 Sobic.007G061000 mitotic checkpoint protein, putative, expressed K14298: RAE1, mRNA export factor
9 Sobic.001G512700 myb/SANT domain protein, putative, expressed -
10 Sobic.004G066200 ubiquitin fusion degradation protein, putative, expressed K14016: ubiquitin fusion degradation protein 1
11 Sobic.010G027600 transcription factor TFIIF, putative, expressed K11341: YEATS4, GAS41, YEATS domain-containing protein 4
12 Sobic.002G034600 zinc ion binding protein, putative, expressed -
13 Sobic.004G084300 MYB family transcription factor, putative, expressed K11324: DMAP1, SWC4, DNA methyltransferase 1-associated protein 1
14 Sobic.001G392300 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12820: DHX15, pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43
15 Sobic.003G248200 NLI interacting factor-like phosphatase, putative, expressed -
16 Sobic.008G112800 pre-mRNA-processing factor 6, putative, expressed K12855: PRPF6, pre-mRNA-processing factor 6
17 Sobic.007G091600 proline rich protein 3, putative, expressed -
18 Sobic.001G080700 casein kinase II subunit alpha-2, putative, expressed K03097: casein kinase II subunit alpha
19 Sobic.003G081000 transcription factor, putative, expressed K14431: transcription factor TGA
20 Sobic.004G274200 ara54-like RING finger protein, putative, expressed K11971: RNF14, E3 ubiquitin-protein ligase RNF14


Gene co-expression network
sample Sobic009G179700 Sobic009G179700 Sobic002G350300 Sobic002G350300 Sobic009G179700--Sobic002G350300 Sobic001G356600 Sobic001G356600 Sobic009G179700--Sobic001G356600 Sobic007G078600 Sobic007G078600 Sobic009G179700--Sobic007G078600 Sobic010G018700 Sobic010G018700 Sobic009G179700--Sobic010G018700 Sobic008G179700 Sobic008G179700 Sobic009G179700--Sobic008G179700 Sobic007G078500 Sobic007G078500 Sobic009G179700--Sobic007G078500 Sobic003G029100 Sobic003G029100 Sobic009G179700--Sobic003G029100 Sobic007G061000 Sobic007G061000 Sobic009G179700--Sobic007G061000 Sobic001G512700 Sobic001G512700 Sobic009G179700--Sobic001G512700 Sobic002G350300--Sobic008G179700 Sobic009G205200 Sobic009G205200 Sobic002G350300--Sobic009G205200 Sobic002G350300--Sobic009G179700 Sobic001G107500 Sobic001G107500 Sobic002G350300--Sobic001G107500 Sobic002G350300--Sobic001G512700 Sobic007G132400 Sobic007G132400 Sobic002G350300--Sobic007G132400 Sobic010G028300 Sobic010G028300 Sobic002G350300--Sobic010G028300 Sobic001G119300 Sobic001G119300 Sobic002G350300--Sobic001G119300 Sobic006G088100 Sobic006G088100 Sobic002G350300--Sobic006G088100 Sobic004G066200 Sobic004G066200 Sobic001G356600--Sobic004G066200 Sobic003G248200 Sobic003G248200 Sobic001G356600--Sobic003G248200 Sobic002G034600 Sobic002G034600 Sobic001G356600--Sobic002G034600 Sobic001G356600--Sobic001G512700 Sobic009G228700 Sobic009G228700 Sobic001G356600--Sobic009G228700 Sobic001G356600--Sobic009G179700 Sobic001G356600--Sobic010G018700 Sobic001G356600--Sobic008G179700 Sobic004G274200 Sobic004G274200 Sobic001G356600--Sobic004G274200 Sobic008G047800 Sobic008G047800 Sobic007G078600--Sobic008G047800 Sobic003G394300 Sobic003G394300 Sobic007G078600--Sobic003G394300 Sobic003G084700 Sobic003G084700 Sobic007G078600--Sobic003G084700 Sobic006G118700 Sobic006G118700 Sobic007G078600--Sobic006G118700 Sobic006G200600 Sobic006G200600 Sobic007G078600--Sobic006G200600 Sobic007G078600--Sobic009G179700 Sobic007G078600--Sobic007G078500 Sobic002G134200 Sobic002G134200 Sobic007G078600--Sobic002G134200 Sobic002G133400 Sobic002G133400 Sobic007G078600--Sobic002G133400 Sobic010G018700--Sobic001G356600 Sobic010G018700--Sobic009G179700 Sobic010G027600 Sobic010G027600 Sobic010G018700--Sobic010G027600 Sobic004G104900 Sobic004G104900 Sobic010G018700--Sobic004G104900 Sobic003G439800 Sobic003G439800 Sobic010G018700--Sobic003G439800 Sobic009G058500 Sobic009G058500 Sobic010G018700--Sobic009G058500 Sobic004G141700 Sobic004G141700 Sobic010G018700--Sobic004G141700 Sobic010G193800 Sobic010G193800 Sobic010G018700--Sobic010G193800 Sobic010G018700--Sobic004G066200 Sobic008G179700--Sobic002G350300 Sobic008G179700--Sobic003G248200 Sobic001G281600 Sobic001G281600 Sobic008G179700--Sobic001G281600 Sobic008G179700--Sobic001G356600 Sobic008G179700--Sobic009G179700 Sobic004G084300 Sobic004G084300 Sobic008G179700--Sobic004G084300 Sobic003G401100 Sobic003G401100 Sobic008G179700--Sobic003G401100 Sobic002G126500 Sobic002G126500 Sobic008G179700--Sobic002G126500 Sobic008G179700--Sobic001G512700 Sobic007G078500--Sobic001G281600 Sobic007G078500--Sobic007G078600 Sobic004G121100 Sobic004G121100 Sobic007G078500--Sobic004G121100 Sobic007G078500--Sobic009G179700 Sobic007G078500--Sobic008G179700 Sobic008G076800 Sobic008G076800 Sobic007G078500--Sobic008G076800 Sobic001G080700 Sobic001G080700 Sobic007G078500--Sobic001G080700 Sobic010G279700 Sobic010G279700 Sobic007G078500--Sobic010G279700 Sobic001G375700 Sobic001G375700 Sobic007G078500--Sobic001G375700 Sobic003G029100--Sobic002G126500 Sobic003G029100--Sobic009G179700 Sobic007G203200 Sobic007G203200 Sobic003G029100--Sobic007G203200 Sobic010G236400 Sobic010G236400 Sobic003G029100--Sobic010G236400 Sobic003G029100--Sobic001G375700 Sobic003G029100--Sobic001G356600 Sobic003G029100--Sobic007G061000 Sobic006G173100 Sobic006G173100 Sobic003G029100--Sobic006G173100 Sobic003G029100--Sobic006G118700 Sobic001G392300 Sobic001G392300 Sobic007G061000--Sobic001G392300 Sobic001G522600 Sobic001G522600 Sobic007G061000--Sobic001G522600 Sobic009G177500 Sobic009G177500 Sobic007G061000--Sobic009G177500 Sobic007G061000--Sobic004G084300 Sobic007G061000--Sobic008G047800 Sobic007G061000--Sobic006G118700 Sobic007G061000--Sobic009G179700 Sobic007G061000--Sobic002G134200 Sobic007G157000 Sobic007G157000 Sobic007G061000--Sobic007G157000 Sobic001G512700--Sobic008G047800 Sobic002G006900 Sobic002G006900 Sobic001G512700--Sobic002G006900 Sobic001G512700--Sobic003G248200 Sobic001G497300 Sobic001G497300 Sobic001G512700--Sobic001G497300 Sobic007G118600 Sobic007G118600 Sobic001G512700--Sobic007G118600 Sobic004G021100 Sobic004G021100 Sobic001G512700--Sobic004G021100 Sobic005G045300 Sobic005G045300 Sobic001G512700--Sobic005G045300 Sobic002G297200 Sobic002G297200 Sobic001G512700--Sobic002G297200 Sobic008G067600 Sobic008G067600 Sobic001G512700--Sobic008G067600
Octagon: transcription factors


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