Gene annotation
Transcriptome id Sobic.010G018700.1
Synonym Sb10g001810
Functional annotation H-BTB4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed
UniProt C5Z386
Pfam PF00651
Panther DB PTHR31060 PTHR31060:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G05675 : BTB/POZ domain-containing protein
RAP-DB (Rice) LOC_Os06g03840.1 : H-BTB4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed
MaizeGDB (Corn) Zm00025a050192
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.010G018700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G356600 KH domain-containing protein, putative, expressed K13162: poly(rC)-binding protein 2
2 Sobic.009G179700 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
3 Sobic.010G027600 transcription factor TFIIF, putative, expressed K11341: YEATS4, GAS41, YEATS domain-containing protein 4
4 Sobic.004G104900 CGMC_GSK.4 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K14502: protein brassinosteroid insensitive 2
5 Sobic.003G439800 growth inhibition and differentiation-related protein 88, putative, expressed -
6 Sobic.009G058500 phosphatidylinositolglycan-related, putative, expressed K03858: PIGH, phosphatidylinositol N-acetylglucosaminyltransferase subunit H
7 Sobic.004G141700 expressed protein -
8 Sobic.010G193800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
9 Sobic.004G066200 ubiquitin fusion degradation protein, putative, expressed K14016: ubiquitin fusion degradation protein 1
10 Sobic.005G004200 GIL1, putative, expressed -
11 Sobic.004G350100 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed K05610: UCHL5, ubiquitin carboxyl-terminal hydrolase L5
12 Sobic.008G179700 TATA-binding protein, putative, expressed K03120: TBP, transcription initiation factor TFIID TATA-box-binding protein
13 Sobic.002G256300 zinc finger, C3HC4 type domain containing protein, expressed -
14 Sobic.009G228700 expressed protein -
15 Sobic.009G198100 expressed protein -
16 Sobic.006G252700 protein kinase domain containing protein, expressed -
17 Sobic.003G029100 frigida, putative, expressed -
18 Sobic.002G010300 photoperiodic flowering time gene(PubMedID : 22394582)@casein kinase II subunit alpha-2, putative, expressed K03097: casein kinase II subunit alpha
19 Sobic.002G395801 - -
20 Sobic.001G360200 novel plant SNARE 11, putative, expressed K08494: novel plant SNARE


Gene co-expression network
sample Sobic010G018700 Sobic010G018700 Sobic001G356600 Sobic001G356600 Sobic010G018700--Sobic001G356600 Sobic009G179700 Sobic009G179700 Sobic010G018700--Sobic009G179700 Sobic010G027600 Sobic010G027600 Sobic010G018700--Sobic010G027600 Sobic004G104900 Sobic004G104900 Sobic010G018700--Sobic004G104900 Sobic003G439800 Sobic003G439800 Sobic010G018700--Sobic003G439800 Sobic009G058500 Sobic009G058500 Sobic010G018700--Sobic009G058500 Sobic004G141700 Sobic004G141700 Sobic010G018700--Sobic004G141700 Sobic010G193800 Sobic010G193800 Sobic010G018700--Sobic010G193800 Sobic004G066200 Sobic004G066200 Sobic010G018700--Sobic004G066200 Sobic001G356600--Sobic004G066200 Sobic003G248200 Sobic003G248200 Sobic001G356600--Sobic003G248200 Sobic002G034600 Sobic002G034600 Sobic001G356600--Sobic002G034600 Sobic001G512700 Sobic001G512700 Sobic001G356600--Sobic001G512700 Sobic009G228700 Sobic009G228700 Sobic001G356600--Sobic009G228700 Sobic001G356600--Sobic009G179700 Sobic001G356600--Sobic010G018700 Sobic008G179700 Sobic008G179700 Sobic001G356600--Sobic008G179700 Sobic004G274200 Sobic004G274200 Sobic001G356600--Sobic004G274200 Sobic002G350300 Sobic002G350300 Sobic009G179700--Sobic002G350300 Sobic009G179700--Sobic001G356600 Sobic007G078600 Sobic007G078600 Sobic009G179700--Sobic007G078600 Sobic009G179700--Sobic010G018700 Sobic009G179700--Sobic008G179700 Sobic007G078500 Sobic007G078500 Sobic009G179700--Sobic007G078500 Sobic003G029100 Sobic003G029100 Sobic009G179700--Sobic003G029100 Sobic007G061000 Sobic007G061000 Sobic009G179700--Sobic007G061000 Sobic009G179700--Sobic001G512700 Sobic010G027600--Sobic010G018700 Sobic010G027600--Sobic004G066200 Sobic009G222500 Sobic009G222500 Sobic010G027600--Sobic009G222500 Sobic002G352600 Sobic002G352600 Sobic010G027600--Sobic002G352600 Sobic010G027600--Sobic009G179700 Sobic002G110700 Sobic002G110700 Sobic010G027600--Sobic002G110700 Sobic002G192200 Sobic002G192200 Sobic010G027600--Sobic002G192200 Sobic010G027600--Sobic009G228700 Sobic006G049700 Sobic006G049700 Sobic010G027600--Sobic006G049700 Sobic002G256300 Sobic002G256300 Sobic004G104900--Sobic002G256300 Sobic010G083700 Sobic010G083700 Sobic004G104900--Sobic010G083700 Sobic010G168600 Sobic010G168600 Sobic004G104900--Sobic010G168600 Sobic004G104900--Sobic010G018700 Sobic003G007500 Sobic003G007500 Sobic004G104900--Sobic003G007500 Sobic004G104900--Sobic004G066200 Sobic004G104900--Sobic009G228700 Sobic001G007200 Sobic001G007200 Sobic004G104900--Sobic001G007200 Sobic009G246950 Sobic009G246950 Sobic004G104900--Sobic009G246950 Sobic001G143500 Sobic001G143500 Sobic003G439800--Sobic001G143500 Sobic006G252700 Sobic006G252700 Sobic003G439800--Sobic006G252700 Sobic006G278700 Sobic006G278700 Sobic003G439800--Sobic006G278700 Sobic003G439800--Sobic010G018700 Sobic002G268400 Sobic002G268400 Sobic003G439800--Sobic002G268400 Sobic001G142100 Sobic001G142100 Sobic003G439800--Sobic001G142100 Sobic003G439800--Sobic009G058500 Sobic003G401100 Sobic003G401100 Sobic003G439800--Sobic003G401100 Sobic010G279700 Sobic010G279700 Sobic003G439800--Sobic010G279700 Sobic001G360200 Sobic001G360200 Sobic009G058500--Sobic001G360200 Sobic007G184500 Sobic007G184500 Sobic009G058500--Sobic007G184500 Sobic009G058500--Sobic010G018700 Sobic002G077900 Sobic002G077900 Sobic009G058500--Sobic002G077900 Sobic009G058500--Sobic003G439800 Sobic003G074400 Sobic003G074400 Sobic009G058500--Sobic003G074400 Sobic009G058500--Sobic006G278700 Sobic006G044600 Sobic006G044600 Sobic009G058500--Sobic006G044600 Sobic004G346100 Sobic004G346100 Sobic009G058500--Sobic004G346100 Sobic009G232400 Sobic009G232400 Sobic004G141700--Sobic009G232400 Sobic004G141700--Sobic001G007200 Sobic004G141700--Sobic010G193800 Sobic001G402300 Sobic001G402300 Sobic004G141700--Sobic001G402300 Sobic001G226100 Sobic001G226100 Sobic004G141700--Sobic001G226100 Sobic001G054200 Sobic001G054200 Sobic004G141700--Sobic001G054200 Sobic004G141700--Sobic010G018700 Sobic004G141700--Sobic010G083700 Sobic001G439600 Sobic001G439600 Sobic004G141700--Sobic001G439600 Sobic003G420700 Sobic003G420700 Sobic010G193800--Sobic003G420700 Sobic004G356900 Sobic004G356900 Sobic010G193800--Sobic004G356900 Sobic010G193800--Sobic002G256300 Sobic001G532100 Sobic001G532100 Sobic010G193800--Sobic001G532100 Sobic006G225300 Sobic006G225300 Sobic010G193800--Sobic006G225300 Sobic007G203700 Sobic007G203700 Sobic010G193800--Sobic007G203700 Sobic010G193800--Sobic001G439600 Sobic010G193800--Sobic004G141700 Sobic010G193800--Sobic009G246950 Sobic004G066200--Sobic001G356600 Sobic004G066200--Sobic009G228700 Sobic006G101700 Sobic006G101700 Sobic004G066200--Sobic006G101700 Sobic001G080700 Sobic001G080700 Sobic004G066200--Sobic001G080700 Sobic001G392300 Sobic001G392300 Sobic004G066200--Sobic001G392300 Sobic003G352200 Sobic003G352200 Sobic004G066200--Sobic003G352200 Sobic004G066200--Sobic003G248200 Sobic004G353200 Sobic004G353200 Sobic004G066200--Sobic004G353200 Sobic001G091300 Sobic001G091300 Sobic004G066200--Sobic001G091300
Octagon: transcription factors


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