Gene annotation
Transcriptome id Sobic.004G141700.1,Sobic.004G141700.2
Synonym Sb04g017520
Functional annotation expressed protein
UniProt C5Y152
Pfam -
Panther DB PTHR36388 PTHR36388:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G38980 : -
RAP-DB (Rice) LOC_Os02g26960.1 : expressed protein
MaizeGDB (Corn) Zm00025a031318
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G141700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G232400 expressed protein -
2 Sobic.001G007200 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
3 Sobic.010G193800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
4 Sobic.001G402300 RNA recognition motif containing protein, putative, expressed K11094: U2 small nuclear ribonucleoprotein B''
5 Sobic.001G226100 L11 domain containing ribosomal protein, putative, expressed K02867: RP-L11, MRPL11, large subunit ribosomal protein L11
6 Sobic.001G054200 green ripe-like, putative, expressed -
7 Sobic.010G018700 H-BTB4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed -
8 Sobic.010G083700 formin-binding protein-related, putative, expressed K13220: WBP4, WW domain-binding protein 4
9 Sobic.001G439600 26S proteasome non-ATPase regulatory subunit 4, putative, expressed K03029: PSMD4, 26S proteasome regulatory subunit N10
10 Sobic.004G104900 CGMC_GSK.4 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K14502: protein brassinosteroid insensitive 2
11 Sobic.007G118000 double-stranded RNA binding motif containing protein, expressed -
12 Sobic.009G246950 - K12898: heterogeneous nuclear ribonucleoprotein F/H
13 Sobic.004G086600 26S protease regulatory subunit, putative, expressed K03066: PSMC5, 26S proteasome regulatory subunit T6
14 Sobic.001G529000 THO complex subunit 7, putative, expressed K13176: THO complex subunit 7
15 Sobic.002G281300 trafficking protein particle complex subunit, putative, expressed -
16 Sobic.001G216200 transcription factor BTF3, putative, expressed K01527: EGD1, nascent polypeptide-associated complex subunit beta
17 Sobic.003G350600 HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
18 Sobic.002G256300 zinc finger, C3HC4 type domain containing protein, expressed -
19 Sobic.009G135600 UBA/TS-N domain containing protein, expressed -
20 Sobic.010G027600 transcription factor TFIIF, putative, expressed K11341: YEATS4, GAS41, YEATS domain-containing protein 4


Gene co-expression network
sample Sobic004G141700 Sobic004G141700 Sobic009G232400 Sobic009G232400 Sobic004G141700--Sobic009G232400 Sobic001G007200 Sobic001G007200 Sobic004G141700--Sobic001G007200 Sobic010G193800 Sobic010G193800 Sobic004G141700--Sobic010G193800 Sobic001G402300 Sobic001G402300 Sobic004G141700--Sobic001G402300 Sobic001G226100 Sobic001G226100 Sobic004G141700--Sobic001G226100 Sobic001G054200 Sobic001G054200 Sobic004G141700--Sobic001G054200 Sobic010G018700 Sobic010G018700 Sobic004G141700--Sobic010G018700 Sobic010G083700 Sobic010G083700 Sobic004G141700--Sobic010G083700 Sobic001G439600 Sobic001G439600 Sobic004G141700--Sobic001G439600 Sobic009G232400--Sobic004G141700 Sobic009G232400--Sobic001G402300 Sobic003G350600 Sobic003G350600 Sobic009G232400--Sobic003G350600 Sobic009G232400--Sobic001G226100 Sobic009G232400--Sobic001G007200 Sobic009G232400--Sobic010G083700 Sobic010G251100 Sobic010G251100 Sobic009G232400--Sobic010G251100 Sobic009G232400--Sobic001G054200 Sobic007G118000 Sobic007G118000 Sobic009G232400--Sobic007G118000 Sobic001G007200--Sobic010G083700 Sobic001G415500 Sobic001G415500 Sobic001G007200--Sobic001G415500 Sobic007G186300 Sobic007G186300 Sobic001G007200--Sobic007G186300 Sobic010G253800 Sobic010G253800 Sobic001G007200--Sobic010G253800 Sobic004G086600 Sobic004G086600 Sobic001G007200--Sobic004G086600 Sobic001G073000 Sobic001G073000 Sobic001G007200--Sobic001G073000 Sobic009G246950 Sobic009G246950 Sobic001G007200--Sobic009G246950 Sobic001G007200--Sobic004G141700 Sobic009G146100 Sobic009G146100 Sobic001G007200--Sobic009G146100 Sobic003G420700 Sobic003G420700 Sobic010G193800--Sobic003G420700 Sobic004G356900 Sobic004G356900 Sobic010G193800--Sobic004G356900 Sobic002G256300 Sobic002G256300 Sobic010G193800--Sobic002G256300 Sobic001G532100 Sobic001G532100 Sobic010G193800--Sobic001G532100 Sobic006G225300 Sobic006G225300 Sobic010G193800--Sobic006G225300 Sobic007G203700 Sobic007G203700 Sobic010G193800--Sobic007G203700 Sobic010G193800--Sobic001G439600 Sobic010G193800--Sobic004G141700 Sobic010G193800--Sobic009G246950 Sobic008G137600 Sobic008G137600 Sobic001G402300--Sobic008G137600 Sobic001G402300--Sobic001G226100 Sobic001G402300--Sobic004G141700 Sobic001G402300--Sobic010G251100 Sobic001G402300--Sobic007G118000 Sobic001G402300--Sobic009G232400 Sobic002G413400 Sobic002G413400 Sobic001G402300--Sobic002G413400 Sobic001G529000 Sobic001G529000 Sobic001G402300--Sobic001G529000 Sobic001G285300 Sobic001G285300 Sobic001G402300--Sobic001G285300 Sobic001G226100--Sobic010G251100 Sobic001G226100--Sobic001G402300 Sobic001G226100--Sobic004G141700 Sobic001G226100--Sobic009G232400 Sobic002G306400 Sobic002G306400 Sobic001G226100--Sobic002G306400 Sobic001G226100--Sobic007G118000 Sobic006G252100 Sobic006G252100 Sobic001G226100--Sobic006G252100 Sobic001G512600 Sobic001G512600 Sobic001G226100--Sobic001G512600 Sobic001G226100--Sobic001G054200 Sobic001G054200--Sobic010G083700 Sobic006G263900 Sobic006G263900 Sobic001G054200--Sobic006G263900 Sobic006G212100 Sobic006G212100 Sobic001G054200--Sobic006G212100 Sobic001G054200--Sobic007G186300 Sobic004G293700 Sobic004G293700 Sobic001G054200--Sobic004G293700 Sobic001G054200--Sobic009G246950 Sobic004G079100 Sobic004G079100 Sobic001G054200--Sobic004G079100 Sobic006G232200 Sobic006G232200 Sobic001G054200--Sobic006G232200 Sobic003G115800 Sobic003G115800 Sobic001G054200--Sobic003G115800 Sobic001G356600 Sobic001G356600 Sobic010G018700--Sobic001G356600 Sobic009G179700 Sobic009G179700 Sobic010G018700--Sobic009G179700 Sobic010G027600 Sobic010G027600 Sobic010G018700--Sobic010G027600 Sobic004G104900 Sobic004G104900 Sobic010G018700--Sobic004G104900 Sobic003G439800 Sobic003G439800 Sobic010G018700--Sobic003G439800 Sobic009G058500 Sobic009G058500 Sobic010G018700--Sobic009G058500 Sobic010G018700--Sobic004G141700 Sobic010G018700--Sobic010G193800 Sobic004G066200 Sobic004G066200 Sobic010G018700--Sobic004G066200 Sobic010G083700--Sobic006G263900 Sobic010G168600 Sobic010G168600 Sobic010G083700--Sobic010G168600 Sobic010G083700--Sobic001G054200 Sobic010G083700--Sobic001G007200 Sobic010G083700--Sobic009G246950 Sobic010G083700--Sobic004G293700 Sobic010G083700--Sobic010G253800 Sobic010G083700--Sobic002G256300 Sobic003G007500 Sobic003G007500 Sobic010G083700--Sobic003G007500 Sobic003G124800 Sobic003G124800 Sobic001G439600--Sobic003G124800 Sobic002G129000 Sobic002G129000 Sobic001G439600--Sobic002G129000 Sobic001G439600--Sobic010G083700 Sobic001G294900 Sobic001G294900 Sobic001G439600--Sobic001G294900 Sobic001G136900 Sobic001G136900 Sobic001G439600--Sobic001G136900 Sobic001G439600--Sobic001G054200 Sobic001G439600--Sobic010G168600 Sobic001G439600--Sobic002G256300 Sobic001G439600--Sobic001G529000
Octagon: transcription factors


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