Gene annotation
Transcriptome id Sobic.007G118000.1
Synonym HYL1, Sb07g019380, DRB1
Functional annotation double-stranded RNA binding motif containing protein, expressed
UniProt C5YKL8
Pfam PF00035
Panther DB PTHR11207 PTHR11207:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G09700 : dsRNA-binding domain-like superfamily protein
RAP-DB (Rice) LOC_Os08g29530.1 : double-stranded RNA binding motif containing protein, expressed
MaizeGDB (Corn) Zm00025a006105
Brachypodium KQJ98103
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G118000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G045600 MSP domain containing protein, expressed -
2 Sobic.001G033500 dolichyl-phosphate beta-glycosyltransferase, putative, expressed K00729: dolichyl-phosphate beta-glucosyltransferase
3 Sobic.001G402300 RNA recognition motif containing protein, putative, expressed K11094: U2 small nuclear ribonucleoprotein B''
4 Sobic.003G374000 ubiquitin-like domain-containing CTD phosphatase 1, putative, expressed K17618: ubiquitin-like domain-containing CTD phosphatase 1
5 Sobic.004G072800 expressed protein -
6 Sobic.002G281300 trafficking protein particle complex subunit, putative, expressed -
7 Sobic.001G067900 clathrin adaptor complex small chain domain containing protein, expressed K12394: AP-1 complex subunit sigma 1/2
8 Sobic.004G141700 expressed protein -
9 Sobic.001G323300 ethylene-responsive element-binding protein, putative, expressed -
10 Sobic.003G007500 CK1_CaseinKinase_1.1 - CK1 includes the casein kinase 1 kinases, expressed -
11 Sobic.008G137600 RNA recognition motif containing protein, expressed K12900: FUS-interacting serine-arginine-rich protein 1
12 Sobic.001G054200 green ripe-like, putative, expressed -
13 Sobic.004G103600 actin-related protein 2/3 complex subunit 3, putative, expressed K05756: actin related protein 2/3 complex, subunit 3
14 Sobic.003G350600 HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
15 Sobic.003G349300 serine/threonine-protein kinase AFC1, putative, expressed K08287: dual-specificity kinase
16 Sobic.009G232400 expressed protein -
17 Sobic.007G203700 SNF1-related protein kinase regulatory subunit beta-2, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
18 Sobic.001G529000 THO complex subunit 7, putative, expressed K13176: THO complex subunit 7
19 Sobic.001G458700 26S protease regulatory subunit 6B, putative, expressed K03063: PSMC4, 26S proteasome regulatory subunit T3
20 Sobic.003G124800 26S proteasome non-ATPase regulatory subunit 14, putative, expressed K03030: PSMD14, RPN11, 26S proteasome regulatory subunit N11


Gene co-expression network
sample Sobic007G118000 Sobic007G118000 Sobic007G045600 Sobic007G045600 Sobic007G118000--Sobic007G045600 Sobic001G033500 Sobic001G033500 Sobic007G118000--Sobic001G033500 Sobic001G402300 Sobic001G402300 Sobic007G118000--Sobic001G402300 Sobic003G374000 Sobic003G374000 Sobic007G118000--Sobic003G374000 Sobic004G072800 Sobic004G072800 Sobic007G118000--Sobic004G072800 Sobic002G281300 Sobic002G281300 Sobic007G118000--Sobic002G281300 Sobic001G067900 Sobic001G067900 Sobic007G118000--Sobic001G067900 Sobic004G141700 Sobic004G141700 Sobic007G118000--Sobic004G141700 Sobic001G323300 Sobic001G323300 Sobic007G118000--Sobic001G323300 Sobic007G114200 Sobic007G114200 Sobic007G045600--Sobic007G114200 Sobic007G019100 Sobic007G019100 Sobic007G045600--Sobic007G019100 Sobic003G124800 Sobic003G124800 Sobic007G045600--Sobic003G124800 Sobic006G232200 Sobic006G232200 Sobic007G045600--Sobic006G232200 Sobic003G261400 Sobic003G261400 Sobic007G045600--Sobic003G261400 Sobic007G142500 Sobic007G142500 Sobic007G045600--Sobic007G142500 Sobic004G086600 Sobic004G086600 Sobic007G045600--Sobic004G086600 Sobic001G461900 Sobic001G461900 Sobic007G045600--Sobic001G461900 Sobic007G045600--Sobic007G118000 Sobic001G283200 Sobic001G283200 Sobic001G033500--Sobic001G283200 Sobic007G184500 Sobic007G184500 Sobic001G033500--Sobic007G184500 Sobic006G148200 Sobic006G148200 Sobic001G033500--Sobic006G148200 Sobic001G033500--Sobic007G118000 Sobic001G085100 Sobic001G085100 Sobic001G033500--Sobic001G085100 Sobic010G073100 Sobic010G073100 Sobic001G033500--Sobic010G073100 Sobic001G458700 Sobic001G458700 Sobic001G033500--Sobic001G458700 Sobic002G113800 Sobic002G113800 Sobic001G033500--Sobic002G113800 Sobic003G012200 Sobic003G012200 Sobic001G033500--Sobic003G012200 Sobic008G137600 Sobic008G137600 Sobic001G402300--Sobic008G137600 Sobic001G226100 Sobic001G226100 Sobic001G402300--Sobic001G226100 Sobic001G402300--Sobic004G141700 Sobic010G251100 Sobic010G251100 Sobic001G402300--Sobic010G251100 Sobic001G402300--Sobic007G118000 Sobic009G232400 Sobic009G232400 Sobic001G402300--Sobic009G232400 Sobic002G413400 Sobic002G413400 Sobic001G402300--Sobic002G413400 Sobic001G529000 Sobic001G529000 Sobic001G402300--Sobic001G529000 Sobic001G285300 Sobic001G285300 Sobic001G402300--Sobic001G285300 Sobic003G374000--Sobic007G118000 Sobic009G192000 Sobic009G192000 Sobic003G374000--Sobic009G192000 Sobic010G205300 Sobic010G205300 Sobic003G374000--Sobic010G205300 Sobic002G268400 Sobic002G268400 Sobic003G374000--Sobic002G268400 Sobic001G341500 Sobic001G341500 Sobic003G374000--Sobic001G341500 Sobic007G167900 Sobic007G167900 Sobic003G374000--Sobic007G167900 Sobic003G338500 Sobic003G338500 Sobic003G374000--Sobic003G338500 Sobic001G428800 Sobic001G428800 Sobic003G374000--Sobic001G428800 Sobic003G374000--Sobic008G137600 Sobic004G072800--Sobic001G067900 Sobic003G350600 Sobic003G350600 Sobic004G072800--Sobic003G350600 Sobic003G007500 Sobic003G007500 Sobic004G072800--Sobic003G007500 Sobic002G313500 Sobic002G313500 Sobic004G072800--Sobic002G313500 Sobic004G072800--Sobic007G118000 Sobic001G522900 Sobic001G522900 Sobic004G072800--Sobic001G522900 Sobic004G072800--Sobic002G281300 Sobic001G429400 Sobic001G429400 Sobic004G072800--Sobic001G429400 Sobic003G045400 Sobic003G045400 Sobic004G072800--Sobic003G045400 Sobic002G281300--Sobic003G261400 Sobic006G250900 Sobic006G250900 Sobic002G281300--Sobic006G250900 Sobic002G281300--Sobic003G007500 Sobic002G281300--Sobic001G067900 Sobic002G281300--Sobic010G205300 Sobic001G388200 Sobic001G388200 Sobic002G281300--Sobic001G388200 Sobic004G194900 Sobic004G194900 Sobic002G281300--Sobic004G194900 Sobic001G054200 Sobic001G054200 Sobic002G281300--Sobic001G054200 Sobic003G349300 Sobic003G349300 Sobic002G281300--Sobic003G349300 Sobic001G105100 Sobic001G105100 Sobic001G067900--Sobic001G105100 Sobic001G067900--Sobic004G072800 Sobic006G257001 Sobic006G257001 Sobic001G067900--Sobic006G257001 Sobic001G067900--Sobic002G281300 Sobic003G217100 Sobic003G217100 Sobic001G067900--Sobic003G217100 Sobic006G034800 Sobic006G034800 Sobic001G067900--Sobic006G034800 Sobic001G067900--Sobic006G250900 Sobic001G067900--Sobic010G205300 Sobic001G237500 Sobic001G237500 Sobic001G067900--Sobic001G237500 Sobic004G141700--Sobic009G232400 Sobic001G007200 Sobic001G007200 Sobic004G141700--Sobic001G007200 Sobic010G193800 Sobic010G193800 Sobic004G141700--Sobic010G193800 Sobic004G141700--Sobic001G402300 Sobic004G141700--Sobic001G226100 Sobic004G141700--Sobic001G054200 Sobic010G018700 Sobic010G018700 Sobic004G141700--Sobic010G018700 Sobic010G083700 Sobic010G083700 Sobic004G141700--Sobic010G083700 Sobic001G439600 Sobic001G439600 Sobic004G141700--Sobic001G439600 Sobic001G323300--Sobic001G458700 Sobic001G323300--Sobic007G118000 Sobic001G323300--Sobic007G045600 Sobic004G344800 Sobic004G344800 Sobic001G323300--Sobic004G344800 Sobic001G031900 Sobic001G031900 Sobic001G323300--Sobic001G031900 Sobic005G086500 Sobic005G086500 Sobic001G323300--Sobic005G086500 Sobic007G176200 Sobic007G176200 Sobic001G323300--Sobic007G176200 Sobic004G030000 Sobic004G030000 Sobic001G323300--Sobic004G030000 Sobic002G157100 Sobic002G157100 Sobic001G323300--Sobic002G157100
Octagon: transcription factors


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