Gene annotation
Transcriptome id Sobic.003G350600.1
Synonym HVA22K, Sb03g039350
Functional annotation HVA22, putative, expressed
UniProt C5XPN1
Pfam PF03134
Panther DB PTHR12300 PTHR12300:SF60
NCBI CDD KOG1725; Protein involved in membrane traffic (YOP1/TB2/DP1/HVA22 family)
KEGG Orthology K17279; receptor expression-enhancing protein 5/6
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G36720 : HVA22-like protein K
RAP-DB (Rice) LOC_Os07g38100.1 : HVA22, putative, expressed
MaizeGDB (Corn) Zm00025a026926
Brachypodium KQK15662
Barley HORVU2Hr1G058860.6 , HORVU2Hr1G058860.5 , HORVU2Hr1G058860.4 , HORVU2Hr1G058860.2 , HORVU2Hr1G058860.1
Wheat TraesCS2D02G207900 , TraesCS2B02G227600 , TraesCS2A02G200000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G072800 expressed protein -
2 Sobic.001G512600 protein phosphatase 2C, putative, expressed -
3 Sobic.003G007500 CK1_CaseinKinase_1.1 - CK1 includes the casein kinase 1 kinases, expressed -
4 Sobic.008G142700 expressed protein -
5 Sobic.003G226500 suppressor of G2 allele of SKP1, putative, expressed K12795: SUGT1, suppressor of G2 allele of SKP1
6 Sobic.001G427800 tyrosine protein kinase domain containing protein, putative, expressed -
7 Sobic.009G232400 expressed protein -
8 Sobic.001G061700 "similar to BTB/POZ domain containing protein, expressed"(PubMedID : 29862293)@MBTB3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
9 Sobic.001G067900 clathrin adaptor complex small chain domain containing protein, expressed K12394: AP-1 complex subunit sigma 1/2
10 Sobic.007G186300 ankyrin repeat domain containing protein, putative, expressed -
11 Sobic.001G430800 GA17271-PA, putative, expressed -
12 Sobic.002G272600 TBC domain containing protein, expressed -
13 Sobic.007G118000 double-stranded RNA binding motif containing protein, expressed -
14 Sobic.007G115900 SAM domain family protein, expressed -
15 Sobic.009G193400 AGC_AGC_other_NDRh_TRCd.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed K08790: STK38, serine/threonine kinase 38
16 Sobic.001G138300 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
17 Sobic.010G071200 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@ubiquitin-conjugating enzyme, putative, expressed K04554: UBE2J2, NCUBE2, ubiquitin-conjugating enzyme E2 J2
18 Sobic.003G115800 miro, putative, expressed K07953: GTP-binding protein SAR1
19 Sobic.001G054200 green ripe-like, putative, expressed -
20 Sobic.009G246950 - K12898: heterogeneous nuclear ribonucleoprotein F/H


Gene co-expression network
sample Sobic003G350600 Sobic003G350600 Sobic004G072800 Sobic004G072800 Sobic003G350600--Sobic004G072800 Sobic001G512600 Sobic001G512600 Sobic003G350600--Sobic001G512600 Sobic003G007500 Sobic003G007500 Sobic003G350600--Sobic003G007500 Sobic008G142700 Sobic008G142700 Sobic003G350600--Sobic008G142700 Sobic003G226500 Sobic003G226500 Sobic003G350600--Sobic003G226500 Sobic001G427800 Sobic001G427800 Sobic003G350600--Sobic001G427800 Sobic009G232400 Sobic009G232400 Sobic003G350600--Sobic009G232400 Sobic001G061700 Sobic001G061700 Sobic003G350600--Sobic001G061700 Sobic001G067900 Sobic001G067900 Sobic003G350600--Sobic001G067900 Sobic004G072800--Sobic001G067900 Sobic004G072800--Sobic003G350600 Sobic004G072800--Sobic003G007500 Sobic002G313500 Sobic002G313500 Sobic004G072800--Sobic002G313500 Sobic007G118000 Sobic007G118000 Sobic004G072800--Sobic007G118000 Sobic001G522900 Sobic001G522900 Sobic004G072800--Sobic001G522900 Sobic002G281300 Sobic002G281300 Sobic004G072800--Sobic002G281300 Sobic001G429400 Sobic001G429400 Sobic004G072800--Sobic001G429400 Sobic003G045400 Sobic003G045400 Sobic004G072800--Sobic003G045400 Sobic001G512600--Sobic003G350600 Sobic001G467000 Sobic001G467000 Sobic001G512600--Sobic001G467000 Sobic001G512600--Sobic008G142700 Sobic003G250500 Sobic003G250500 Sobic001G512600--Sobic003G250500 Sobic004G150400 Sobic004G150400 Sobic001G512600--Sobic004G150400 Sobic001G512600--Sobic003G226500 Sobic004G301900 Sobic004G301900 Sobic001G512600--Sobic004G301900 Sobic003G000800 Sobic003G000800 Sobic001G512600--Sobic003G000800 Sobic001G372000 Sobic001G372000 Sobic001G512600--Sobic001G372000 Sobic007G186300 Sobic007G186300 Sobic003G007500--Sobic007G186300 Sobic010G083700 Sobic010G083700 Sobic003G007500--Sobic010G083700 Sobic010G168600 Sobic010G168600 Sobic003G007500--Sobic010G168600 Sobic001G078500 Sobic001G078500 Sobic003G007500--Sobic001G078500 Sobic003G295400 Sobic003G295400 Sobic003G007500--Sobic003G295400 Sobic001G051200 Sobic001G051200 Sobic003G007500--Sobic001G051200 Sobic003G007500--Sobic004G072800 Sobic004G104900 Sobic004G104900 Sobic003G007500--Sobic004G104900 Sobic003G007500--Sobic002G281300 Sobic010G071200 Sobic010G071200 Sobic008G142700--Sobic010G071200 Sobic001G512900 Sobic001G512900 Sobic008G142700--Sobic001G512900 Sobic010G055500 Sobic010G055500 Sobic008G142700--Sobic010G055500 Sobic001G149700 Sobic001G149700 Sobic008G142700--Sobic001G149700 Sobic007G063200 Sobic007G063200 Sobic008G142700--Sobic007G063200 Sobic008G142700--Sobic003G350600 Sobic006G109300 Sobic006G109300 Sobic008G142700--Sobic006G109300 Sobic009G246950 Sobic009G246950 Sobic008G142700--Sobic009G246950 Sobic001G478300 Sobic001G478300 Sobic008G142700--Sobic001G478300 Sobic003G226500--Sobic003G250500 Sobic003G226500--Sobic004G104900 Sobic003G226500--Sobic003G007500 Sobic003G226500--Sobic003G350600 Sobic001G136900 Sobic001G136900 Sobic003G226500--Sobic001G136900 Sobic003G226500--Sobic010G083700 Sobic004G226800 Sobic004G226800 Sobic003G226500--Sobic004G226800 Sobic003G226500--Sobic001G512600 Sobic001G054200 Sobic001G054200 Sobic003G226500--Sobic001G054200 Sobic001G427800--Sobic001G478300 Sobic001G427800--Sobic001G149700 Sobic001G427800--Sobic010G071200 Sobic003G273100 Sobic003G273100 Sobic001G427800--Sobic003G273100 Sobic001G371300 Sobic001G371300 Sobic001G427800--Sobic001G371300 Sobic002G291300 Sobic002G291300 Sobic001G427800--Sobic002G291300 Sobic003G093900 Sobic003G093900 Sobic001G427800--Sobic003G093900 Sobic001G427800--Sobic008G142700 Sobic001G427800--Sobic003G350600 Sobic004G141700 Sobic004G141700 Sobic009G232400--Sobic004G141700 Sobic001G402300 Sobic001G402300 Sobic009G232400--Sobic001G402300 Sobic009G232400--Sobic003G350600 Sobic001G226100 Sobic001G226100 Sobic009G232400--Sobic001G226100 Sobic001G007200 Sobic001G007200 Sobic009G232400--Sobic001G007200 Sobic009G232400--Sobic010G083700 Sobic010G251100 Sobic010G251100 Sobic009G232400--Sobic010G251100 Sobic009G232400--Sobic001G054200 Sobic009G232400--Sobic007G118000 Sobic004G059000 Sobic004G059000 Sobic001G061700--Sobic004G059000 Sobic002G272600 Sobic002G272600 Sobic001G061700--Sobic002G272600 Sobic001G061700--Sobic003G350600 Sobic007G205000 Sobic007G205000 Sobic001G061700--Sobic007G205000 Sobic002G365100 Sobic002G365100 Sobic001G061700--Sobic002G365100 Sobic010G105600 Sobic010G105600 Sobic001G061700--Sobic010G105600 Sobic003G273500 Sobic003G273500 Sobic001G061700--Sobic003G273500 Sobic001G028400 Sobic001G028400 Sobic001G061700--Sobic001G028400 Sobic002G378200 Sobic002G378200 Sobic001G061700--Sobic002G378200 Sobic001G105100 Sobic001G105100 Sobic001G067900--Sobic001G105100 Sobic001G067900--Sobic004G072800 Sobic006G257001 Sobic006G257001 Sobic001G067900--Sobic006G257001 Sobic001G067900--Sobic002G281300 Sobic003G217100 Sobic003G217100 Sobic001G067900--Sobic003G217100 Sobic006G034800 Sobic006G034800 Sobic001G067900--Sobic006G034800 Sobic006G250900 Sobic006G250900 Sobic001G067900--Sobic006G250900 Sobic010G205300 Sobic010G205300 Sobic001G067900--Sobic010G205300 Sobic001G237500 Sobic001G237500 Sobic001G067900--Sobic001G237500
Octagon: transcription factors


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