Gene annotation
Transcriptome id Sobic.001G512600.1
Synonym Sb01g047830
Functional annotation protein phosphatase 2C, putative, expressed
UniProt Q1KSB5 , C5WYZ4 , Q1HNC5
Pfam PF00481
Panther DB PTHR13832 PTHR13832:SF342
NCBI CDD KOG0700; Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase
KEGG Orthology -
Gene Ontology GO:0003824; catalytic activity GO:0006470protein dephosphorylation GO:0004722protein serine/threonine phosphatase activity


Orthologs (automatic annotation)
TAIR AT3G51370 : Protein phosphatase 2C family protein
RAP-DB (Rice) LOC_Os03g04430.1 : protein phosphatase 2C, putative, expressed
MaizeGDB (Corn) Zm00025a053381 , Zm00025a000508 , Zm00025a000504 , Zm00025a000505
Brachypodium KQK23764 , KQK11830 , KQK11829
Barley HORVU4Hr1G080570.6 , HORVU4Hr1G080570.4 , HORVU4Hr1G080570.5 , HORVU4Hr1G080570.2 , HORVU4Hr1G080570.3 , HORVU4Hr1G080570.1
Wheat TraesCS4B02G335500 , TraesCS5A02G505300 , TraesCS4D02G331100
Populus PNS98532 , PNT31485


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cDNA sequences
Sobic.001G512600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G350600 HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
2 Sobic.001G467000 ADP-ribosylation factor, putative, expressed K07955: ADP-ribosylation factor-like protein 8
3 Sobic.008G142700 expressed protein -
4 Sobic.003G250500 splicing factor U2AF, putative, expressed K12836: splicing factor U2AF 35 kDa subunit
5 Sobic.004G150400 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
6 Sobic.003G226500 suppressor of G2 allele of SKP1, putative, expressed K12795: SUGT1, suppressor of G2 allele of SKP1
7 Sobic.004G301900 potyvirus VPg interacting protein, putative, expressed -
8 Sobic.003G000800 RWP-RK domain-containing protein, putative, expressed -
9 Sobic.001G372000 OsFBT5 - F-box and tubby domain containing protein, expressed -
10 Sobic.008G062000 expressed protein K11878: PSMG4, proteasome assembly chaperone 4
11 Sobic.004G072800 expressed protein -
12 Sobic.004G305600 SKIP/SNW domain containing protein, expressed K06063: SNW1, SKIIP, SNW domain-containing protein 1
13 Sobic.010G012600 expressed protein -
14 Sobic.001G226100 L11 domain containing ribosomal protein, putative, expressed K02867: RP-L11, MRPL11, large subunit ribosomal protein L11
15 Sobic.003G045400 DNA-directed RNA polymerase II subunit RPB7, putative, expressed K03015: RPB7, DNA-directed RNA polymerase II subunit RPB7
16 Sobic.004G059000 serine/threonine-protein kinase HT1, putative, expressed -
17 Sobic.001G028400 domain of unknown function domain containing protein, expressed -
18 Sobic.002G132300 Ser/Thr protein phosphatase family protein, putative, expressed K01517: manganese-dependent ADP-ribose/CDP-alcohol diphosphatase
19 Sobic.009G133400 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
20 Sobic.001G350501 - K11253: histone H3


Gene co-expression network
sample Sobic001G512600 Sobic001G512600 Sobic003G350600 Sobic003G350600 Sobic001G512600--Sobic003G350600 Sobic001G467000 Sobic001G467000 Sobic001G512600--Sobic001G467000 Sobic008G142700 Sobic008G142700 Sobic001G512600--Sobic008G142700 Sobic003G250500 Sobic003G250500 Sobic001G512600--Sobic003G250500 Sobic004G150400 Sobic004G150400 Sobic001G512600--Sobic004G150400 Sobic003G226500 Sobic003G226500 Sobic001G512600--Sobic003G226500 Sobic004G301900 Sobic004G301900 Sobic001G512600--Sobic004G301900 Sobic003G000800 Sobic003G000800 Sobic001G512600--Sobic003G000800 Sobic001G372000 Sobic001G372000 Sobic001G512600--Sobic001G372000 Sobic004G072800 Sobic004G072800 Sobic003G350600--Sobic004G072800 Sobic003G350600--Sobic001G512600 Sobic003G007500 Sobic003G007500 Sobic003G350600--Sobic003G007500 Sobic003G350600--Sobic008G142700 Sobic003G350600--Sobic003G226500 Sobic001G427800 Sobic001G427800 Sobic003G350600--Sobic001G427800 Sobic009G232400 Sobic009G232400 Sobic003G350600--Sobic009G232400 Sobic001G061700 Sobic001G061700 Sobic003G350600--Sobic001G061700 Sobic001G067900 Sobic001G067900 Sobic003G350600--Sobic001G067900 Sobic001G467000--Sobic001G372000 Sobic003G045400 Sobic003G045400 Sobic001G467000--Sobic003G045400 Sobic001G467000--Sobic004G150400 Sobic001G467000--Sobic001G512600 Sobic001G464100 Sobic001G464100 Sobic001G467000--Sobic001G464100 Sobic002G313500 Sobic002G313500 Sobic001G467000--Sobic002G313500 Sobic001G028400 Sobic001G028400 Sobic001G467000--Sobic001G028400 Sobic010G211300 Sobic010G211300 Sobic001G467000--Sobic010G211300 Sobic001G291100 Sobic001G291100 Sobic001G467000--Sobic001G291100 Sobic010G071200 Sobic010G071200 Sobic008G142700--Sobic010G071200 Sobic001G512900 Sobic001G512900 Sobic008G142700--Sobic001G512900 Sobic010G055500 Sobic010G055500 Sobic008G142700--Sobic010G055500 Sobic001G149700 Sobic001G149700 Sobic008G142700--Sobic001G149700 Sobic007G063200 Sobic007G063200 Sobic008G142700--Sobic007G063200 Sobic008G142700--Sobic003G350600 Sobic006G109300 Sobic006G109300 Sobic008G142700--Sobic006G109300 Sobic009G246950 Sobic009G246950 Sobic008G142700--Sobic009G246950 Sobic001G478300 Sobic001G478300 Sobic008G142700--Sobic001G478300 Sobic004G059000 Sobic004G059000 Sobic003G250500--Sobic004G059000 Sobic004G305600 Sobic004G305600 Sobic003G250500--Sobic004G305600 Sobic003G250500--Sobic004G301900 Sobic008G062000 Sobic008G062000 Sobic003G250500--Sobic008G062000 Sobic001G281600 Sobic001G281600 Sobic003G250500--Sobic001G281600 Sobic003G250500--Sobic003G226500 Sobic004G253000 Sobic004G253000 Sobic003G250500--Sobic004G253000 Sobic003G250500--Sobic001G512600 Sobic001G119300 Sobic001G119300 Sobic003G250500--Sobic001G119300 Sobic004G119000 Sobic004G119000 Sobic004G150400--Sobic004G119000 Sobic004G150400--Sobic010G055500 Sobic007G205800 Sobic007G205800 Sobic004G150400--Sobic007G205800 Sobic002G272800 Sobic002G272800 Sobic004G150400--Sobic002G272800 Sobic004G150400--Sobic010G071200 Sobic004G150400--Sobic001G028400 Sobic006G088100 Sobic006G088100 Sobic004G150400--Sobic006G088100 Sobic003G093600 Sobic003G093600 Sobic004G150400--Sobic003G093600 Sobic004G150400--Sobic006G109300 Sobic003G226500--Sobic003G250500 Sobic004G104900 Sobic004G104900 Sobic003G226500--Sobic004G104900 Sobic003G226500--Sobic003G007500 Sobic003G226500--Sobic003G350600 Sobic001G136900 Sobic001G136900 Sobic003G226500--Sobic001G136900 Sobic010G083700 Sobic010G083700 Sobic003G226500--Sobic010G083700 Sobic004G226800 Sobic004G226800 Sobic003G226500--Sobic004G226800 Sobic003G226500--Sobic001G512600 Sobic001G054200 Sobic001G054200 Sobic003G226500--Sobic001G054200 Sobic010G090900 Sobic010G090900 Sobic004G301900--Sobic010G090900 Sobic004G301900--Sobic003G250500 Sobic002G113900 Sobic002G113900 Sobic004G301900--Sobic002G113900 Sobic004G301900--Sobic004G059000 Sobic004G301900--Sobic004G253000 Sobic004G301900--Sobic001G512600 Sobic007G019800 Sobic007G019800 Sobic004G301900--Sobic007G019800 Sobic001G051200 Sobic001G051200 Sobic004G301900--Sobic001G051200 Sobic004G356900 Sobic004G356900 Sobic004G301900--Sobic004G356900 Sobic003G000800--Sobic009G246950 Sobic001G031200 Sobic001G031200 Sobic003G000800--Sobic001G031200 Sobic001G078500 Sobic001G078500 Sobic003G000800--Sobic001G078500 Sobic003G000800--Sobic004G253000 Sobic003G000800--Sobic001G512600 Sobic001G371300 Sobic001G371300 Sobic003G000800--Sobic001G371300 Sobic003G000800--Sobic010G083700 Sobic003G000800--Sobic001G149700 Sobic007G186300 Sobic007G186300 Sobic003G000800--Sobic007G186300 Sobic001G372000--Sobic001G467000 Sobic001G372000--Sobic004G150400 Sobic010G145900 Sobic010G145900 Sobic001G372000--Sobic010G145900 Sobic006G209500 Sobic006G209500 Sobic001G372000--Sobic006G209500 Sobic001G372000--Sobic001G512600 Sobic002G132300 Sobic002G132300 Sobic001G372000--Sobic002G132300 Sobic001G372000--Sobic001G291100 Sobic001G372000--Sobic001G478300 Sobic003G305400 Sobic003G305400 Sobic001G372000--Sobic003G305400
Octagon: transcription factors


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