Gene annotation
Transcriptome id Sobic.001G372000.1,Sobic.001G372000.2,Sobic.001G372000.5,Sobic.001G372000.4
Synonym AtTLP3, TLP3, Sb01g035360
Functional annotation OsFBT5 - F-box and tubby domain containing protein, expressed
UniProt A0A1B6QN76
Pfam PF00646 PF01167
Panther DB PTHR16517 PTHR16517:SF37
NCBI CDD KOG2502; Tub family proteins
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G47900 : tubby like protein 3
RAP-DB (Rice) LOC_Os03g22800.1 : OsFBT5 - F-box and tubby domain containing protein, expressed
MaizeGDB (Corn) Zm00025a002471
Brachypodium KQK21682
Barley -
Wheat TraesCS4A02G140800 , TraesCS2D02G122900 , TraesCS4B02G166400 , TraesCS4D02G164200
Populus PNT48240 , PNT48241 , PNT48239 , PNT48238


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cDNA sequences
Sobic.001G372000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G467000 ADP-ribosylation factor, putative, expressed K07955: ADP-ribosylation factor-like protein 8
2 Sobic.004G150400 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
3 Sobic.010G145900 phosphatidylinositol 3- and 4-kinase family protein, putative, expressed -
4 Sobic.006G209500 transcription initiation factor IIE subunit beta, putative, expressed K03137: TFIIE2, GTF2E2, transcription initiation factor TFIIE subunit beta
5 Sobic.001G512600 protein phosphatase 2C, putative, expressed -
6 Sobic.002G132300 Ser/Thr protein phosphatase family protein, putative, expressed K01517: manganese-dependent ADP-ribose/CDP-alcohol diphosphatase
7 Sobic.001G291100 tetraspanin family protein, putative, expressed -
8 Sobic.001G478300 modifier of rudimentary protein, expressed K12185: ESCRT-I complex subunit VPS37
9 Sobic.003G305400 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7
10 Sobic.001G464100 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
11 Sobic.003G078800 PB1 domain containing protein, expressed -
12 Sobic.001G123000 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
13 Sobic.003G007500 CK1_CaseinKinase_1.1 - CK1 includes the casein kinase 1 kinases, expressed -
14 Sobic.004G348100 DNL zinc finger domain containing protein, putative, expressed K17808: ZIM17, DNLZ, mitochondrial protein import protein ZIM17
15 Sobic.006G215300 tetratricopeptide repeat domain containing protein, expressed -
16 Sobic.009G117300 protein kinase APK1B, chloroplast precursor, putative, expressed -
17 Sobic.006G114500 per1-like family protein, putative, expressed -
18 Sobic.009G157200 OsFBL23 - F-box domain and LRR containing protein, expressed K13463: coronatine-insensitive protein 1
19 Sobic.010G043600 IQ calmodulin-binding motif domain containing protein, expressed -
20 Sobic.002G378200 adaptor complexes medium subunit family domain containing protein, expressed K12402: AP-4 complex subunit mu-1


Gene co-expression network
sample Sobic001G372000 Sobic001G372000 Sobic001G467000 Sobic001G467000 Sobic001G372000--Sobic001G467000 Sobic004G150400 Sobic004G150400 Sobic001G372000--Sobic004G150400 Sobic010G145900 Sobic010G145900 Sobic001G372000--Sobic010G145900 Sobic006G209500 Sobic006G209500 Sobic001G372000--Sobic006G209500 Sobic001G512600 Sobic001G512600 Sobic001G372000--Sobic001G512600 Sobic002G132300 Sobic002G132300 Sobic001G372000--Sobic002G132300 Sobic001G291100 Sobic001G291100 Sobic001G372000--Sobic001G291100 Sobic001G478300 Sobic001G478300 Sobic001G372000--Sobic001G478300 Sobic003G305400 Sobic003G305400 Sobic001G372000--Sobic003G305400 Sobic001G467000--Sobic001G372000 Sobic003G045400 Sobic003G045400 Sobic001G467000--Sobic003G045400 Sobic001G467000--Sobic004G150400 Sobic001G467000--Sobic001G512600 Sobic001G464100 Sobic001G464100 Sobic001G467000--Sobic001G464100 Sobic002G313500 Sobic002G313500 Sobic001G467000--Sobic002G313500 Sobic001G028400 Sobic001G028400 Sobic001G467000--Sobic001G028400 Sobic010G211300 Sobic010G211300 Sobic001G467000--Sobic010G211300 Sobic001G467000--Sobic001G291100 Sobic004G119000 Sobic004G119000 Sobic004G150400--Sobic004G119000 Sobic010G055500 Sobic010G055500 Sobic004G150400--Sobic010G055500 Sobic007G205800 Sobic007G205800 Sobic004G150400--Sobic007G205800 Sobic002G272800 Sobic002G272800 Sobic004G150400--Sobic002G272800 Sobic010G071200 Sobic010G071200 Sobic004G150400--Sobic010G071200 Sobic004G150400--Sobic001G028400 Sobic006G088100 Sobic006G088100 Sobic004G150400--Sobic006G088100 Sobic003G093600 Sobic003G093600 Sobic004G150400--Sobic003G093600 Sobic006G109300 Sobic006G109300 Sobic004G150400--Sobic006G109300 Sobic010G264400 Sobic010G264400 Sobic010G145900--Sobic010G264400 Sobic010G145900--Sobic003G305400 Sobic010G145900--Sobic006G209500 Sobic004G263900 Sobic004G263900 Sobic010G145900--Sobic004G263900 Sobic010G145900--Sobic001G372000 Sobic003G185200 Sobic003G185200 Sobic010G145900--Sobic003G185200 Sobic010G145900--Sobic001G478300 Sobic010G260500 Sobic010G260500 Sobic010G145900--Sobic010G260500 Sobic004G350100 Sobic004G350100 Sobic010G145900--Sobic004G350100 Sobic006G209500--Sobic001G478300 Sobic004G271900 Sobic004G271900 Sobic006G209500--Sobic004G271900 Sobic006G209500--Sobic006G088100 Sobic006G209500--Sobic003G093600 Sobic002G324200 Sobic002G324200 Sobic006G209500--Sobic002G324200 Sobic009G117400 Sobic009G117400 Sobic006G209500--Sobic009G117400 Sobic006G209500--Sobic004G150400 Sobic002G262600 Sobic002G262600 Sobic006G209500--Sobic002G262600 Sobic006G209500--Sobic007G205800 Sobic003G350600 Sobic003G350600 Sobic001G512600--Sobic003G350600 Sobic001G512600--Sobic001G467000 Sobic008G142700 Sobic008G142700 Sobic001G512600--Sobic008G142700 Sobic003G250500 Sobic003G250500 Sobic001G512600--Sobic003G250500 Sobic001G512600--Sobic004G150400 Sobic003G226500 Sobic003G226500 Sobic001G512600--Sobic003G226500 Sobic004G301900 Sobic004G301900 Sobic001G512600--Sobic004G301900 Sobic003G000800 Sobic003G000800 Sobic001G512600--Sobic003G000800 Sobic001G512600--Sobic001G372000 Sobic002G378200 Sobic002G378200 Sobic002G132300--Sobic002G378200 Sobic009G054700 Sobic009G054700 Sobic002G132300--Sobic009G054700 Sobic004G007300 Sobic004G007300 Sobic002G132300--Sobic004G007300 Sobic002G132300--Sobic001G028400 Sobic002G084300 Sobic002G084300 Sobic002G132300--Sobic002G084300 Sobic002G132300--Sobic004G263900 Sobic001G512900 Sobic001G512900 Sobic002G132300--Sobic001G512900 Sobic008G174300 Sobic008G174300 Sobic002G132300--Sobic008G174300 Sobic010G033400 Sobic010G033400 Sobic002G132300--Sobic010G033400 Sobic009G157200 Sobic009G157200 Sobic001G291100--Sobic009G157200 Sobic001G281600 Sobic001G281600 Sobic001G291100--Sobic001G281600 Sobic001G291100--Sobic004G119000 Sobic010G056200 Sobic010G056200 Sobic001G291100--Sobic010G056200 Sobic001G119300 Sobic001G119300 Sobic001G291100--Sobic001G119300 Sobic001G291100--Sobic004G150400 Sobic001G107500 Sobic001G107500 Sobic001G291100--Sobic001G107500 Sobic001G291100--Sobic006G088100 Sobic004G083700 Sobic004G083700 Sobic001G291100--Sobic004G083700 Sobic004G231400 Sobic004G231400 Sobic001G478300--Sobic004G231400 Sobic001G478300--Sobic010G071200 Sobic001G478300--Sobic006G209500 Sobic001G427800 Sobic001G427800 Sobic001G478300--Sobic001G427800 Sobic001G149700 Sobic001G149700 Sobic001G478300--Sobic001G149700 Sobic001G478300--Sobic010G055500 Sobic001G478300--Sobic004G263900 Sobic003G273100 Sobic003G273100 Sobic001G478300--Sobic003G273100 Sobic004G274700 Sobic004G274700 Sobic001G478300--Sobic004G274700 Sobic003G305400--Sobic010G145900 Sobic009G235900 Sobic009G235900 Sobic003G305400--Sobic009G235900 Sobic003G305400--Sobic006G209500 Sobic003G305400--Sobic001G478300 Sobic001G347600 Sobic001G347600 Sobic003G305400--Sobic001G347600 Sobic003G305400--Sobic001G372000 Sobic003G154700 Sobic003G154700 Sobic003G305400--Sobic003G154700 Sobic003G081100 Sobic003G081100 Sobic003G305400--Sobic003G081100 Sobic003G305400--Sobic010G264400
Octagon: transcription factors


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