Gene annotation
Transcriptome id Sobic.001G467000.1
Synonym ATARLA1C, ARLA1C, Sb01g043820
Functional annotation ADP-ribosylation factor, putative, expressed
UniProt C5WTU4
Pfam PF00071
Panther DB PTHR11711 PTHR11711:SF178
NCBI CDD KOG0075; GTP-binding ADP-ribosylation factor-like protein
KEGG Orthology K07955; ADP-ribosylation factor-like protein 8
Gene Ontology GO:0007264; small GTPase mediated signal transduction GO:0005525GTP binding


Orthologs (automatic annotation)
TAIR AT3G49870 : ADP-ribosylation factor-like A1C
RAP-DB (Rice) LOC_Os03g10370.1 : ADP-ribosylation factor, putative, expressed
MaizeGDB (Corn) Zm00025a053151 , Zm00025a001168
Brachypodium KQK23084
Barley HORVU4Hr1G070410.6 , HORVU4Hr1G070410.4 , HORVU4Hr1G070410.5 , HORVU4Hr1G070410.2 , HORVU4Hr1G070410.3 , HORVU4Hr1G070410.1
Wheat TraesCS4A02G045000 , TraesCS4B02G260300 , TraesCS4D02G260100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G372000 OsFBT5 - F-box and tubby domain containing protein, expressed -
2 Sobic.003G045400 DNA-directed RNA polymerase II subunit RPB7, putative, expressed K03015: RPB7, DNA-directed RNA polymerase II subunit RPB7
3 Sobic.004G150400 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
4 Sobic.001G512600 protein phosphatase 2C, putative, expressed -
5 Sobic.001G464100 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
6 Sobic.002G313500 protein kinase PKN/PRK1, effector, putative, expressed -
7 Sobic.001G028400 domain of unknown function domain containing protein, expressed -
8 Sobic.010G211300 protein phosphatase 2C, putative, expressed K17499: PPM1G, protein phosphatase 1G
9 Sobic.001G291100 tetraspanin family protein, putative, expressed -
10 Sobic.004G072800 expressed protein -
11 Sobic.001G067900 clathrin adaptor complex small chain domain containing protein, expressed K12394: AP-1 complex subunit sigma 1/2
12 Sobic.003G154700 stripe rust resistance protein Yr10, putative, expressed -
13 Sobic.010G249300 Ser/Thr protein phosphatase family protein, putative, expressed -
14 Sobic.004G298300 ELMO/CED-12 family protein, putative, expressed -
15 Sobic.002G132300 Ser/Thr protein phosphatase family protein, putative, expressed K01517: manganese-dependent ADP-ribose/CDP-alcohol diphosphatase
16 Sobic.007G191100 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
17 Sobic.004G350100 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed K05610: UCHL5, ubiquitin carboxyl-terminal hydrolase L5
18 Sobic.001G253600 expressed protein -
19 Sobic.001G149700 vesicle transport v-SNARE protein, putative, expressed K08496: GOSR2, golgi SNAP receptor complex member 2
20 Sobic.005G007800 F-box/LRR-repeat protein 3, putative, expressed K10268: F-box and leucine-rich repeat protein 2/20


Gene co-expression network
sample Sobic001G467000 Sobic001G467000 Sobic001G372000 Sobic001G372000 Sobic001G467000--Sobic001G372000 Sobic003G045400 Sobic003G045400 Sobic001G467000--Sobic003G045400 Sobic004G150400 Sobic004G150400 Sobic001G467000--Sobic004G150400 Sobic001G512600 Sobic001G512600 Sobic001G467000--Sobic001G512600 Sobic001G464100 Sobic001G464100 Sobic001G467000--Sobic001G464100 Sobic002G313500 Sobic002G313500 Sobic001G467000--Sobic002G313500 Sobic001G028400 Sobic001G028400 Sobic001G467000--Sobic001G028400 Sobic010G211300 Sobic010G211300 Sobic001G467000--Sobic010G211300 Sobic001G291100 Sobic001G291100 Sobic001G467000--Sobic001G291100 Sobic001G372000--Sobic001G467000 Sobic001G372000--Sobic004G150400 Sobic010G145900 Sobic010G145900 Sobic001G372000--Sobic010G145900 Sobic006G209500 Sobic006G209500 Sobic001G372000--Sobic006G209500 Sobic001G372000--Sobic001G512600 Sobic002G132300 Sobic002G132300 Sobic001G372000--Sobic002G132300 Sobic001G372000--Sobic001G291100 Sobic001G478300 Sobic001G478300 Sobic001G372000--Sobic001G478300 Sobic003G305400 Sobic003G305400 Sobic001G372000--Sobic003G305400 Sobic003G045400--Sobic001G467000 Sobic006G242300 Sobic006G242300 Sobic003G045400--Sobic006G242300 Sobic003G045400--Sobic010G211300 Sobic008G139700 Sobic008G139700 Sobic003G045400--Sobic008G139700 Sobic003G045400--Sobic002G313500 Sobic001G307900 Sobic001G307900 Sobic003G045400--Sobic001G307900 Sobic004G072800 Sobic004G072800 Sobic003G045400--Sobic004G072800 Sobic009G140700 Sobic009G140700 Sobic003G045400--Sobic009G140700 Sobic001G143500 Sobic001G143500 Sobic003G045400--Sobic001G143500 Sobic004G119000 Sobic004G119000 Sobic004G150400--Sobic004G119000 Sobic010G055500 Sobic010G055500 Sobic004G150400--Sobic010G055500 Sobic007G205800 Sobic007G205800 Sobic004G150400--Sobic007G205800 Sobic002G272800 Sobic002G272800 Sobic004G150400--Sobic002G272800 Sobic010G071200 Sobic010G071200 Sobic004G150400--Sobic010G071200 Sobic004G150400--Sobic001G028400 Sobic006G088100 Sobic006G088100 Sobic004G150400--Sobic006G088100 Sobic003G093600 Sobic003G093600 Sobic004G150400--Sobic003G093600 Sobic006G109300 Sobic006G109300 Sobic004G150400--Sobic006G109300 Sobic003G350600 Sobic003G350600 Sobic001G512600--Sobic003G350600 Sobic001G512600--Sobic001G467000 Sobic008G142700 Sobic008G142700 Sobic001G512600--Sobic008G142700 Sobic003G250500 Sobic003G250500 Sobic001G512600--Sobic003G250500 Sobic001G512600--Sobic004G150400 Sobic003G226500 Sobic003G226500 Sobic001G512600--Sobic003G226500 Sobic004G301900 Sobic004G301900 Sobic001G512600--Sobic004G301900 Sobic003G000800 Sobic003G000800 Sobic001G512600--Sobic003G000800 Sobic001G512600--Sobic001G372000 Sobic001G464100--Sobic001G467000 Sobic001G371200 Sobic001G371200 Sobic001G464100--Sobic001G371200 Sobic003G154700 Sobic003G154700 Sobic001G464100--Sobic003G154700 Sobic001G464100--Sobic001G291100 Sobic001G119300 Sobic001G119300 Sobic001G464100--Sobic001G119300 Sobic001G464100--Sobic002G313500 Sobic001G281600 Sobic001G281600 Sobic001G464100--Sobic001G281600 Sobic001G464100--Sobic003G045400 Sobic010G249300 Sobic010G249300 Sobic001G464100--Sobic010G249300 Sobic002G313500--Sobic001G143500 Sobic002G313500--Sobic001G371200 Sobic004G350100 Sobic004G350100 Sobic002G313500--Sobic004G350100 Sobic002G378200 Sobic002G378200 Sobic002G313500--Sobic002G378200 Sobic004G283000 Sobic004G283000 Sobic002G313500--Sobic004G283000 Sobic002G313500--Sobic008G139700 Sobic004G007300 Sobic004G007300 Sobic002G313500--Sobic004G007300 Sobic001G466700 Sobic001G466700 Sobic002G313500--Sobic001G466700 Sobic010G017800 Sobic010G017800 Sobic002G313500--Sobic010G017800 Sobic010G033400 Sobic010G033400 Sobic001G028400--Sobic010G033400 Sobic007G063200 Sobic007G063200 Sobic001G028400--Sobic007G063200 Sobic001G056200 Sobic001G056200 Sobic001G028400--Sobic001G056200 Sobic004G263900 Sobic004G263900 Sobic001G028400--Sobic004G263900 Sobic003G359300 Sobic003G359300 Sobic001G028400--Sobic003G359300 Sobic007G205000 Sobic007G205000 Sobic001G028400--Sobic007G205000 Sobic003G437500 Sobic003G437500 Sobic001G028400--Sobic003G437500 Sobic007G118200 Sobic007G118200 Sobic001G028400--Sobic007G118200 Sobic001G028400--Sobic010G211300 Sobic010G211300--Sobic001G028400 Sobic004G013600 Sobic004G013600 Sobic010G211300--Sobic004G013600 Sobic006G267300 Sobic006G267300 Sobic010G211300--Sobic006G267300 Sobic010G211300--Sobic001G056200 Sobic001G083600 Sobic001G083600 Sobic010G211300--Sobic001G083600 Sobic010G211300--Sobic010G033400 Sobic002G084300 Sobic002G084300 Sobic010G211300--Sobic002G084300 Sobic010G211300--Sobic003G437500 Sobic005G000800 Sobic005G000800 Sobic010G211300--Sobic005G000800 Sobic009G157200 Sobic009G157200 Sobic001G291100--Sobic009G157200 Sobic001G291100--Sobic001G281600 Sobic001G291100--Sobic004G119000 Sobic010G056200 Sobic010G056200 Sobic001G291100--Sobic010G056200 Sobic001G291100--Sobic001G119300 Sobic001G291100--Sobic004G150400 Sobic001G107500 Sobic001G107500 Sobic001G291100--Sobic001G107500 Sobic001G291100--Sobic006G088100 Sobic004G083700 Sobic004G083700 Sobic001G291100--Sobic004G083700
Octagon: transcription factors


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