Gene annotation
Transcriptome id Sobic.002G313500.1
Synonym Sb02g034300
Functional annotation protein kinase PKN/PRK1, effector, putative, expressed
UniProt A0A1B6QEF9
Pfam -
Panther DB PTHR33405 PTHR33405:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14750 : -
RAP-DB (Rice) LOC_Os07g32450.1 : protein kinase PKN/PRK1, effector, putative, expressed
MaizeGDB (Corn) Zm00025a048177
Brachypodium -
Barley HORVU2Hr1G047850.2 , HORVU2Hr1G047850.3 , HORVU2Hr1G047850.1 , HORVU2Hr1G047850.6 , HORVU2Hr1G047850.7 , HORVU2Hr1G047850.4 , HORVU2Hr1G047850.5
Wheat TraesCS2D02G231800 , TraesCS2D02G231800 , TraesCS2A02G226300 , TraesCS2A02G226300 , TraesCS2B02G249600 , TraesCS2B02G249600 , TraesCS2B02G249600
Populus -


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cDNA sequences
Sobic.002G313500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G143500 pleckstrin homology domain-containing protein, putative, expressed -
2 Sobic.001G371200 SAC3/GANP family protein, putative, expressed -
3 Sobic.004G350100 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed K05610: UCHL5, ubiquitin carboxyl-terminal hydrolase L5
4 Sobic.002G378200 adaptor complexes medium subunit family domain containing protein, expressed K12402: AP-4 complex subunit mu-1
5 Sobic.004G283000 nucleic acid binding protein, putative, expressed -
6 Sobic.008G139700 bromodomain associated family protein, expressed K14649: transcription initiation factor TFIID subunit 8
7 Sobic.004G007300 expressed protein -
8 Sobic.001G466700 peptidyl-prolyl cis-trans isomerase, putative, expressed K10598: PPIL2, CYC4, peptidyl-prolyl cis-trans isomerase-like 2
9 Sobic.010G017800 LMBR1 integral membrane protein, putative, expressed K14617: LMBR1 domain-containing protein 1
10 Sobic.006G252700 protein kinase domain containing protein, expressed -
11 Sobic.004G072800 expressed protein -
12 Sobic.001G201400 - K12614: DDX6, RCK, ATP-dependent RNA helicase DDX6/DHH1
13 Sobic.006G267300 expressed protein -
14 Sobic.006G114500 per1-like family protein, putative, expressed -
15 Sobic.003G400100 leaf senescence related protein, putative, expressed -
16 Sobic.002G388200 LTV1, putative, expressed K14798: protein LTV1
17 Sobic.004G002400 expressed protein -
18 Sobic.007G118200 RNA recognition motif containing protein, expressed K12897: transformer-2 protein
19 Sobic.001G201500 - K12614: DDX6, RCK, ATP-dependent RNA helicase DDX6/DHH1
20 Sobic.009G257800 sodium/calcium exchanger protein, putative, expressed K07300: chaA, Ca2+:H+ antiporter


Gene co-expression network
sample Sobic002G313500 Sobic002G313500 Sobic001G143500 Sobic001G143500 Sobic002G313500--Sobic001G143500 Sobic001G371200 Sobic001G371200 Sobic002G313500--Sobic001G371200 Sobic004G350100 Sobic004G350100 Sobic002G313500--Sobic004G350100 Sobic002G378200 Sobic002G378200 Sobic002G313500--Sobic002G378200 Sobic004G283000 Sobic004G283000 Sobic002G313500--Sobic004G283000 Sobic008G139700 Sobic008G139700 Sobic002G313500--Sobic008G139700 Sobic004G007300 Sobic004G007300 Sobic002G313500--Sobic004G007300 Sobic001G466700 Sobic001G466700 Sobic002G313500--Sobic001G466700 Sobic010G017800 Sobic010G017800 Sobic002G313500--Sobic010G017800 Sobic006G252700 Sobic006G252700 Sobic001G143500--Sobic006G252700 Sobic007G111100 Sobic007G111100 Sobic001G143500--Sobic007G111100 Sobic001G143500--Sobic002G313500 Sobic001G143500--Sobic004G350100 Sobic003G401100 Sobic003G401100 Sobic001G143500--Sobic003G401100 Sobic003G439800 Sobic003G439800 Sobic001G143500--Sobic003G439800 Sobic001G143500--Sobic001G466700 Sobic006G278700 Sobic006G278700 Sobic001G143500--Sobic006G278700 Sobic006G267300 Sobic006G267300 Sobic001G143500--Sobic006G267300 Sobic007G118200 Sobic007G118200 Sobic001G371200--Sobic007G118200 Sobic001G371200--Sobic002G313500 Sobic001G371200--Sobic001G466700 Sobic001G371200--Sobic006G252700 Sobic001G371200--Sobic006G278700 Sobic001G371200--Sobic002G378200 Sobic007G200600 Sobic007G200600 Sobic001G371200--Sobic007G200600 Sobic003G081000 Sobic003G081000 Sobic001G371200--Sobic003G081000 Sobic001G371200--Sobic004G283000 Sobic004G350100--Sobic007G118200 Sobic010G033400 Sobic010G033400 Sobic004G350100--Sobic010G033400 Sobic004G350100--Sobic006G252700 Sobic004G350100--Sobic003G081000 Sobic004G350100--Sobic004G007300 Sobic009G056800 Sobic009G056800 Sobic004G350100--Sobic009G056800 Sobic004G350100--Sobic004G283000 Sobic004G350100--Sobic001G143500 Sobic001G028400 Sobic001G028400 Sobic004G350100--Sobic001G028400 Sobic002G378200--Sobic006G278700 Sobic004G345700 Sobic004G345700 Sobic002G378200--Sobic004G345700 Sobic002G084300 Sobic002G084300 Sobic002G378200--Sobic002G084300 Sobic002G378200--Sobic004G007300 Sobic002G378200--Sobic004G283000 Sobic001G056200 Sobic001G056200 Sobic002G378200--Sobic001G056200 Sobic002G132300 Sobic002G132300 Sobic002G378200--Sobic002G132300 Sobic002G378200--Sobic001G028400 Sobic003G187200 Sobic003G187200 Sobic002G378200--Sobic003G187200 Sobic003G248500 Sobic003G248500 Sobic004G283000--Sobic003G248500 Sobic002G388200 Sobic002G388200 Sobic004G283000--Sobic002G388200 Sobic004G283000--Sobic004G007300 Sobic004G283000--Sobic004G350100 Sobic008G174300 Sobic008G174300 Sobic004G283000--Sobic008G174300 Sobic004G283000--Sobic007G118200 Sobic009G257800 Sobic009G257800 Sobic004G283000--Sobic009G257800 Sobic006G173100 Sobic006G173100 Sobic004G283000--Sobic006G173100 Sobic002G157300 Sobic002G157300 Sobic004G283000--Sobic002G157300 Sobic008G139700--Sobic002G313500 Sobic008G139700--Sobic010G017800 Sobic001G080000 Sobic001G080000 Sobic008G139700--Sobic001G080000 Sobic008G139700--Sobic001G143500 Sobic002G180000 Sobic002G180000 Sobic008G139700--Sobic002G180000 Sobic003G045400 Sobic003G045400 Sobic008G139700--Sobic003G045400 Sobic007G205000 Sobic007G205000 Sobic008G139700--Sobic007G205000 Sobic008G139700--Sobic006G267300 Sobic010G105600 Sobic010G105600 Sobic008G139700--Sobic010G105600 Sobic002G197100 Sobic002G197100 Sobic004G007300--Sobic002G197100 Sobic001G408700 Sobic001G408700 Sobic004G007300--Sobic001G408700 Sobic004G007300--Sobic004G345700 Sobic006G092800 Sobic006G092800 Sobic004G007300--Sobic006G092800 Sobic004G007300--Sobic004G350100 Sobic004G007300--Sobic006G173100 Sobic004G007300--Sobic004G283000 Sobic008G129100 Sobic008G129100 Sobic004G007300--Sobic008G129100 Sobic004G007300--Sobic001G056200 Sobic001G466700--Sobic006G252700 Sobic001G466700--Sobic003G081000 Sobic001G466700--Sobic001G143500 Sobic001G466700--Sobic002G388200 Sobic001G466700--Sobic001G371200 Sobic004G021100 Sobic004G021100 Sobic001G466700--Sobic004G021100 Sobic007G119200 Sobic007G119200 Sobic001G466700--Sobic007G119200 Sobic001G466700--Sobic009G056800 Sobic001G466700--Sobic007G118200 Sobic010G017800--Sobic002G313500 Sobic001G518400 Sobic001G518400 Sobic010G017800--Sobic001G518400 Sobic010G017800--Sobic008G139700 Sobic001G335900 Sobic001G335900 Sobic010G017800--Sobic001G335900 Sobic009G229600 Sobic009G229600 Sobic010G017800--Sobic009G229600 Sobic004G325400 Sobic004G325400 Sobic010G017800--Sobic004G325400 Sobic005G216300 Sobic005G216300 Sobic010G017800--Sobic005G216300 Sobic010G017800--Sobic001G371200 Sobic003G340900 Sobic003G340900 Sobic010G017800--Sobic003G340900
Octagon: transcription factors


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