Gene annotation
Transcriptome id Sobic.006G267300.1
Synonym Sb06g032950, MED9
Functional annotation expressed protein
UniProt C5YAI9
Pfam -
Panther DB PTHR37188
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G55080 : -
RAP-DB (Rice) LOC_Os01g31629.1 : expressed protein
MaizeGDB (Corn) Zm00025a009292
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G267300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G111100 PSF3 - Putative GINS complex subunit, expressed K10734: GINS complex subunit 3
2 Sobic.009G257800 sodium/calcium exchanger protein, putative, expressed K07300: chaA, Ca2+:H+ antiporter
3 Sobic.003G205501 - -
4 Sobic.001G408700 kinesin like protein, putative, expressed K18182: cytochrome c oxidase assembly protein subunit 16
5 Sobic.009G195200 ESP1, putative, expressed -
6 Sobic.007G118200 RNA recognition motif containing protein, expressed K12897: transformer-2 protein
7 Sobic.010G202600 zinc finger, C3HC4 type domain containing protein, expressed K10661: MARCH6, E3 ubiquitin-protein ligase MARCH6
8 Sobic.003G433500 Putative splicing factor(PubMedID : 24356560)@serine/arginine repetitive matrix protein 1, putative, expressed K14325: RNA-binding protein with serine-rich domain 1
9 Sobic.008G127400 OsFBX252 - F-box domain containing protein, expressed -
10 Sobic.004G345700 TBC domain containing protein, expressed -
11 Sobic.001G143500 pleckstrin homology domain-containing protein, putative, expressed -
12 Sobic.010G033400 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
13 Sobic.001G226000 WD domain, G-beta repeat domain containing protein, expressed K10599: PRPF19, pre-mRNA-processing factor 19
14 Sobic.009G198100 expressed protein -
15 Sobic.008G174300 GTPase of unknown function domain containing protein, putative, expressed K14539: large subunit GTPase 1
16 Sobic.004G007300 expressed protein -
17 Sobic.001G028400 domain of unknown function domain containing protein, expressed -
18 Sobic.003G081000 transcription factor, putative, expressed K14431: transcription factor TGA
19 Sobic.007G205000 zinc finger family protein, putative, expressed -
20 Sobic.010G211300 protein phosphatase 2C, putative, expressed K17499: PPM1G, protein phosphatase 1G


Gene co-expression network
sample Sobic006G267300 Sobic006G267300 Sobic007G111100 Sobic007G111100 Sobic006G267300--Sobic007G111100 Sobic009G257800 Sobic009G257800 Sobic006G267300--Sobic009G257800 Sobic003G205501 Sobic003G205501 Sobic006G267300--Sobic003G205501 Sobic001G408700 Sobic001G408700 Sobic006G267300--Sobic001G408700 Sobic009G195200 Sobic009G195200 Sobic006G267300--Sobic009G195200 Sobic007G118200 Sobic007G118200 Sobic006G267300--Sobic007G118200 Sobic010G202600 Sobic010G202600 Sobic006G267300--Sobic010G202600 Sobic003G433500 Sobic003G433500 Sobic006G267300--Sobic003G433500 Sobic008G127400 Sobic008G127400 Sobic006G267300--Sobic008G127400 Sobic007G111100--Sobic010G202600 Sobic002G262700 Sobic002G262700 Sobic007G111100--Sobic002G262700 Sobic007G111100--Sobic006G267300 Sobic001G143500 Sobic001G143500 Sobic007G111100--Sobic001G143500 Sobic001G390500 Sobic001G390500 Sobic007G111100--Sobic001G390500 Sobic004G283000 Sobic004G283000 Sobic007G111100--Sobic004G283000 Sobic004G068500 Sobic004G068500 Sobic007G111100--Sobic004G068500 Sobic001G131800 Sobic001G131800 Sobic007G111100--Sobic001G131800 Sobic007G111100--Sobic003G205501 Sobic003G401000 Sobic003G401000 Sobic009G257800--Sobic003G401000 Sobic009G257800--Sobic006G267300 Sobic003G081000 Sobic003G081000 Sobic009G257800--Sobic003G081000 Sobic009G257800--Sobic004G283000 Sobic004G057400 Sobic004G057400 Sobic009G257800--Sobic004G057400 Sobic002G090800 Sobic002G090800 Sobic009G257800--Sobic002G090800 Sobic006G252700 Sobic006G252700 Sobic009G257800--Sobic006G252700 Sobic004G325400 Sobic004G325400 Sobic009G257800--Sobic004G325400 Sobic001G090400 Sobic001G090400 Sobic009G257800--Sobic001G090400 Sobic003G205501--Sobic001G408700 Sobic006G128800 Sobic006G128800 Sobic003G205501--Sobic006G128800 Sobic004G345700 Sobic004G345700 Sobic003G205501--Sobic004G345700 Sobic003G205501--Sobic006G267300 Sobic003G205501--Sobic010G202600 Sobic010G245000 Sobic010G245000 Sobic003G205501--Sobic010G245000 Sobic003G205501--Sobic008G127400 Sobic008G058800 Sobic008G058800 Sobic003G205501--Sobic008G058800 Sobic003G248500 Sobic003G248500 Sobic003G205501--Sobic003G248500 Sobic001G408700--Sobic003G205501 Sobic004G007300 Sobic004G007300 Sobic001G408700--Sobic004G007300 Sobic001G408700--Sobic004G345700 Sobic001G056200 Sobic001G056200 Sobic001G408700--Sobic001G056200 Sobic001G408700--Sobic007G118200 Sobic001G408700--Sobic006G267300 Sobic002G197100 Sobic002G197100 Sobic001G408700--Sobic002G197100 Sobic001G408700--Sobic004G283000 Sobic001G408700--Sobic010G245000 Sobic002G259800 Sobic002G259800 Sobic009G195200--Sobic002G259800 Sobic009G195200--Sobic003G433500 Sobic009G195200--Sobic006G267300 Sobic002G264200 Sobic002G264200 Sobic009G195200--Sobic002G264200 Sobic001G246500 Sobic001G246500 Sobic009G195200--Sobic001G246500 Sobic003G355000 Sobic003G355000 Sobic009G195200--Sobic003G355000 Sobic007G091600 Sobic007G091600 Sobic009G195200--Sobic007G091600 Sobic001G306900 Sobic001G306900 Sobic009G195200--Sobic001G306900 Sobic001G226000 Sobic001G226000 Sobic009G195200--Sobic001G226000 Sobic010G033400 Sobic010G033400 Sobic007G118200--Sobic010G033400 Sobic007G118200--Sobic003G081000 Sobic004G350100 Sobic004G350100 Sobic007G118200--Sobic004G350100 Sobic009G198100 Sobic009G198100 Sobic007G118200--Sobic009G198100 Sobic008G174300 Sobic008G174300 Sobic007G118200--Sobic008G174300 Sobic002G034600 Sobic002G034600 Sobic007G118200--Sobic002G034600 Sobic007G118200--Sobic006G252700 Sobic001G028400 Sobic001G028400 Sobic007G118200--Sobic001G028400 Sobic007G118200--Sobic001G408700 Sobic010G202600--Sobic007G111100 Sobic001G469800 Sobic001G469800 Sobic010G202600--Sobic001G469800 Sobic010G202600--Sobic001G131800 Sobic003G185200 Sobic003G185200 Sobic010G202600--Sobic003G185200 Sobic010G202600--Sobic003G205501 Sobic010G202600--Sobic006G267300 Sobic009G000500 Sobic009G000500 Sobic010G202600--Sobic009G000500 Sobic010G202600--Sobic008G174300 Sobic010G202600--Sobic003G081000 Sobic003G433500--Sobic009G195200 Sobic003G433500--Sobic003G355000 Sobic002G045400 Sobic002G045400 Sobic003G433500--Sobic002G045400 Sobic009G216000 Sobic009G216000 Sobic003G433500--Sobic009G216000 Sobic003G354100 Sobic003G354100 Sobic003G433500--Sobic003G354100 Sobic003G433500--Sobic006G267300 Sobic006G248500 Sobic006G248500 Sobic003G433500--Sobic006G248500 Sobic002G362300 Sobic002G362300 Sobic003G433500--Sobic002G362300 Sobic003G433500--Sobic002G259800 Sobic007G027700 Sobic007G027700 Sobic008G127400--Sobic007G027700 Sobic008G127400--Sobic006G267300 Sobic008G127400--Sobic003G205501 Sobic006G065800 Sobic006G065800 Sobic008G127400--Sobic006G065800 Sobic004G246700 Sobic004G246700 Sobic008G127400--Sobic004G246700 Sobic008G127400--Sobic008G058800 Sobic002G423200 Sobic002G423200 Sobic008G127400--Sobic002G423200 Sobic008G127400--Sobic006G248500 Sobic008G127400--Sobic010G033400
Octagon: transcription factors


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