Gene annotation
Transcriptome id Sobic.003G205501.1
Synonym -
Functional annotation -
UniProt A0A1W0VY77
Pfam PF09801
Panther DB PTHR12952
NCBI CDD KOG4697; Integral membrane protein involved in transport between the late Golgi and endosome
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G79990 : structural molecules
RAP-DB (Rice) LOC_Os01g41040.1 : SCF apoptosis response protein, putative, expressed
MaizeGDB (Corn) Zm00025a028589 , Zm00025a038440
Brachypodium PNT72311
Barley HORVU3Hr1G051550.1 , HORVU3Hr1G051550.3 , HORVU3Hr1G051550.2 , HORVU3Hr1G051550.5 , HORVU3Hr1G051550.4 , HORVU3Hr1G051550.7 , HORVU3Hr1G051550.6 , HORVU3Hr1G051550.8 , HORVU2Hr1G126600.1 , HORVU2Hr1G126600.3 , HORVU2Hr1G126600.2
Wheat TraesCS3D02G215400 , TraesCS3B02G243400 , TraesCS3A02G213000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G408700 kinesin like protein, putative, expressed K18182: cytochrome c oxidase assembly protein subunit 16
2 Sobic.006G128800 expressed protein -
3 Sobic.004G345700 TBC domain containing protein, expressed -
4 Sobic.006G267300 expressed protein -
5 Sobic.010G202600 zinc finger, C3HC4 type domain containing protein, expressed K10661: MARCH6, E3 ubiquitin-protein ligase MARCH6
6 Sobic.010G245000 DTW domain containing protein, putative, expressed -
7 Sobic.008G127400 OsFBX252 - F-box domain containing protein, expressed -
8 Sobic.008G058800 OsFBX369 - F-box domain containing protein, expressed -
9 Sobic.003G248500 WD domain, G-beta repeat domain containing protein, expressed -
10 Sobic.007G111100 PSF3 - Putative GINS complex subunit, expressed K10734: GINS complex subunit 3
11 Sobic.007G118200 RNA recognition motif containing protein, expressed K12897: transformer-2 protein
12 Sobic.004G007300 expressed protein -
13 Sobic.003G241200 nucampholin, putative, expressed K13100: pre-mRNA-splicing factor CWC22
14 Sobic.010G033400 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
15 Sobic.003G336800 expressed protein -
16 Sobic.004G349900 -(PubMedID : 27329702)@expressed protein -
17 Sobic.003G008500 VHS and GAT domain containing protein, expressed -
18 Sobic.002G197100 RAD23 DNA repair protein, putative, expressed K10839: RAD23, UV excision repair protein RAD23
19 Sobic.010G074900 G protein coupled receptor, putative, expressed -
20 Sobic.001G176200 FHA domain containing protein, putative, expressed K13216: PPP1R8, nuclear inhibitor of protein phosphatase 1


Gene co-expression network
sample Sobic003G205501 Sobic003G205501 Sobic001G408700 Sobic001G408700 Sobic003G205501--Sobic001G408700 Sobic006G128800 Sobic006G128800 Sobic003G205501--Sobic006G128800 Sobic004G345700 Sobic004G345700 Sobic003G205501--Sobic004G345700 Sobic006G267300 Sobic006G267300 Sobic003G205501--Sobic006G267300 Sobic010G202600 Sobic010G202600 Sobic003G205501--Sobic010G202600 Sobic010G245000 Sobic010G245000 Sobic003G205501--Sobic010G245000 Sobic008G127400 Sobic008G127400 Sobic003G205501--Sobic008G127400 Sobic008G058800 Sobic008G058800 Sobic003G205501--Sobic008G058800 Sobic003G248500 Sobic003G248500 Sobic003G205501--Sobic003G248500 Sobic001G408700--Sobic003G205501 Sobic004G007300 Sobic004G007300 Sobic001G408700--Sobic004G007300 Sobic001G408700--Sobic004G345700 Sobic001G056200 Sobic001G056200 Sobic001G408700--Sobic001G056200 Sobic007G118200 Sobic007G118200 Sobic001G408700--Sobic007G118200 Sobic001G408700--Sobic006G267300 Sobic002G197100 Sobic002G197100 Sobic001G408700--Sobic002G197100 Sobic004G283000 Sobic004G283000 Sobic001G408700--Sobic004G283000 Sobic001G408700--Sobic010G245000 Sobic006G128800--Sobic003G205501 Sobic010G174800 Sobic010G174800 Sobic006G128800--Sobic010G174800 Sobic004G349900 Sobic004G349900 Sobic006G128800--Sobic004G349900 Sobic002G157300 Sobic002G157300 Sobic006G128800--Sobic002G157300 Sobic003G261300 Sobic003G261300 Sobic006G128800--Sobic003G261300 Sobic006G128800--Sobic003G248500 Sobic006G130200 Sobic006G130200 Sobic006G128800--Sobic006G130200 Sobic001G514000 Sobic001G514000 Sobic006G128800--Sobic001G514000 Sobic003G008500 Sobic003G008500 Sobic006G128800--Sobic003G008500 Sobic004G345700--Sobic002G197100 Sobic004G345700--Sobic001G514000 Sobic004G345700--Sobic004G007300 Sobic004G345700--Sobic001G408700 Sobic005G154500 Sobic005G154500 Sobic004G345700--Sobic005G154500 Sobic001G176200 Sobic001G176200 Sobic004G345700--Sobic001G176200 Sobic006G092800 Sobic006G092800 Sobic004G345700--Sobic006G092800 Sobic004G345700--Sobic003G205501 Sobic004G345700--Sobic010G245000 Sobic007G111100 Sobic007G111100 Sobic006G267300--Sobic007G111100 Sobic009G257800 Sobic009G257800 Sobic006G267300--Sobic009G257800 Sobic006G267300--Sobic003G205501 Sobic006G267300--Sobic001G408700 Sobic009G195200 Sobic009G195200 Sobic006G267300--Sobic009G195200 Sobic006G267300--Sobic007G118200 Sobic006G267300--Sobic010G202600 Sobic003G433500 Sobic003G433500 Sobic006G267300--Sobic003G433500 Sobic006G267300--Sobic008G127400 Sobic010G202600--Sobic007G111100 Sobic001G469800 Sobic001G469800 Sobic010G202600--Sobic001G469800 Sobic001G131800 Sobic001G131800 Sobic010G202600--Sobic001G131800 Sobic003G185200 Sobic003G185200 Sobic010G202600--Sobic003G185200 Sobic010G202600--Sobic003G205501 Sobic010G202600--Sobic006G267300 Sobic009G000500 Sobic009G000500 Sobic010G202600--Sobic009G000500 Sobic008G174300 Sobic008G174300 Sobic010G202600--Sobic008G174300 Sobic003G081000 Sobic003G081000 Sobic010G202600--Sobic003G081000 Sobic002G056701 Sobic002G056701 Sobic010G245000--Sobic002G056701 Sobic010G245000--Sobic001G176200 Sobic010G245000--Sobic004G345700 Sobic004G084300 Sobic004G084300 Sobic010G245000--Sobic004G084300 Sobic010G245000--Sobic005G154500 Sobic002G264200 Sobic002G264200 Sobic010G245000--Sobic002G264200 Sobic008G173100 Sobic008G173100 Sobic010G245000--Sobic008G173100 Sobic003G241200 Sobic003G241200 Sobic010G245000--Sobic003G241200 Sobic002G260400 Sobic002G260400 Sobic010G245000--Sobic002G260400 Sobic007G027700 Sobic007G027700 Sobic008G127400--Sobic007G027700 Sobic008G127400--Sobic006G267300 Sobic008G127400--Sobic003G205501 Sobic006G065800 Sobic006G065800 Sobic008G127400--Sobic006G065800 Sobic004G246700 Sobic004G246700 Sobic008G127400--Sobic004G246700 Sobic008G127400--Sobic008G058800 Sobic002G423200 Sobic002G423200 Sobic008G127400--Sobic002G423200 Sobic006G248500 Sobic006G248500 Sobic008G127400--Sobic006G248500 Sobic010G033400 Sobic010G033400 Sobic008G127400--Sobic010G033400 Sobic001G042200 Sobic001G042200 Sobic008G058800--Sobic001G042200 Sobic009G129600 Sobic009G129600 Sobic008G058800--Sobic009G129600 Sobic008G058800--Sobic006G248500 Sobic008G058800--Sobic003G205501 Sobic010G077500 Sobic010G077500 Sobic008G058800--Sobic010G077500 Sobic008G058800--Sobic002G264200 Sobic007G026000 Sobic007G026000 Sobic008G058800--Sobic007G026000 Sobic008G058800--Sobic008G127400 Sobic004G180900 Sobic004G180900 Sobic008G058800--Sobic004G180900 Sobic003G359300 Sobic003G359300 Sobic003G248500--Sobic003G359300 Sobic003G248500--Sobic004G283000 Sobic003G248500--Sobic010G174800 Sobic001G390500 Sobic001G390500 Sobic003G248500--Sobic001G390500 Sobic003G248500--Sobic002G197100 Sobic003G248500--Sobic003G185200 Sobic002G365100 Sobic002G365100 Sobic003G248500--Sobic002G365100 Sobic003G051200 Sobic003G051200 Sobic003G248500--Sobic003G051200 Sobic003G248500--Sobic006G128800
Octagon: transcription factors


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