Gene annotation
Transcriptome id Sobic.010G074900.1,Sobic.010G074900.2
Synonym GCR1, Sb10g006560
Functional annotation G protein coupled receptor, putative, expressed
UniProt A0A097PP87 , C5Z611
Pfam PF05462
Panther DB PTHR23112 PTHR23112:SF0
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G48270 : G-protein-coupled receptor 1
RAP-DB (Rice) LOC_Os06g09930.1 : G protein coupled receptor, putative, expressed
MaizeGDB (Corn) Zm00025a042446
Brachypodium KQK19126 , KQK19127
Barley HORVU7Hr1G034160.5 , HORVU7Hr1G034160.4 , HORVU7Hr1G034160.7 , HORVU7Hr1G034160.6 , HORVU7Hr1G034160.1 , HORVU7Hr1G034160.3 , HORVU7Hr1G034160.2 , HORVU7Hr1G034160.9 , HORVU7Hr1G034160.8 , HORVU7Hr1G034160.10
Wheat TraesCS7A02G162400 , TraesCS7D02G164100 , TraesCS7D02G164100 , TraesCS7B02G067700
Populus PNT25876 , PNT25874 , PNT25875


JBrowse

Open New Page


cDNA sequences
Sobic.010G074900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G345700 TBC domain containing protein, expressed -
2 Sobic.003G205501 - -
3 Sobic.001G408700 kinesin like protein, putative, expressed K18182: cytochrome c oxidase assembly protein subunit 16
4 Sobic.001G193100 expressed protein -
5 Sobic.004G084500 GPI-anchor transamidase precursor, putative, expressed K05290: GPI-anchor transamidase subunit K
6 Sobic.006G091000 hydrolase, alpha/beta fold family domain containing protein, expressed K13617: protein phosphatase methylesterase 1
7 Sobic.005G040900 zinc finger, C3HC4 type domain containing protein, expressed K10601: SYVN1, E3 ubiquitin-protein ligase synoviolin
8 Sobic.004G007300 expressed protein -
9 Sobic.003G398400 expressed protein -
10 Sobic.006G244300 expressed protein -
11 Sobic.009G040800 helicase, putative, expressed K10844: ERCC2, DNA excision repair protein ERCC-2
12 Sobic.006G175400 OsFBK22 - F-box domain and kelch repeat containing protein, expressed -
13 Sobic.004G015800 zinc carboxypeptidase family protein, putative, expressed -
14 Sobic.004G345400 WD domain, G-beta repeat domain containing protein, expressed K05757: actin related protein 2/3 complex, subunit 1A/1B
15 Sobic.008G058800 OsFBX369 - F-box domain containing protein, expressed -
16 Sobic.006G092800 proteasome subunit, putative, expressed K03036: PSMD11, 26S proteasome regulatory subunit N6
17 Sobic.006G130200 expressed protein -
18 Sobic.001G042200 ATP/GTP/Ca++ binding protein, putative, expressed K07870: RHOT1, mitochondrial Rho GTPase 1
19 Sobic.006G202200 ENTH domain containing protein, expressed K12471: epsin
20 Sobic.006G082900 expressed protein -


Gene co-expression network
sample Sobic010G074900 Sobic010G074900 Sobic004G345700 Sobic004G345700 Sobic010G074900--Sobic004G345700 Sobic003G205501 Sobic003G205501 Sobic010G074900--Sobic003G205501 Sobic001G408700 Sobic001G408700 Sobic010G074900--Sobic001G408700 Sobic001G193100 Sobic001G193100 Sobic010G074900--Sobic001G193100 Sobic004G084500 Sobic004G084500 Sobic010G074900--Sobic004G084500 Sobic006G091000 Sobic006G091000 Sobic010G074900--Sobic006G091000 Sobic005G040900 Sobic005G040900 Sobic010G074900--Sobic005G040900 Sobic004G007300 Sobic004G007300 Sobic010G074900--Sobic004G007300 Sobic003G398400 Sobic003G398400 Sobic010G074900--Sobic003G398400 Sobic002G197100 Sobic002G197100 Sobic004G345700--Sobic002G197100 Sobic001G514000 Sobic001G514000 Sobic004G345700--Sobic001G514000 Sobic004G345700--Sobic004G007300 Sobic004G345700--Sobic001G408700 Sobic005G154500 Sobic005G154500 Sobic004G345700--Sobic005G154500 Sobic001G176200 Sobic001G176200 Sobic004G345700--Sobic001G176200 Sobic006G092800 Sobic006G092800 Sobic004G345700--Sobic006G092800 Sobic004G345700--Sobic003G205501 Sobic010G245000 Sobic010G245000 Sobic004G345700--Sobic010G245000 Sobic003G205501--Sobic001G408700 Sobic006G128800 Sobic006G128800 Sobic003G205501--Sobic006G128800 Sobic003G205501--Sobic004G345700 Sobic006G267300 Sobic006G267300 Sobic003G205501--Sobic006G267300 Sobic010G202600 Sobic010G202600 Sobic003G205501--Sobic010G202600 Sobic003G205501--Sobic010G245000 Sobic008G127400 Sobic008G127400 Sobic003G205501--Sobic008G127400 Sobic008G058800 Sobic008G058800 Sobic003G205501--Sobic008G058800 Sobic003G248500 Sobic003G248500 Sobic003G205501--Sobic003G248500 Sobic001G408700--Sobic003G205501 Sobic001G408700--Sobic004G007300 Sobic001G408700--Sobic004G345700 Sobic001G056200 Sobic001G056200 Sobic001G408700--Sobic001G056200 Sobic007G118200 Sobic007G118200 Sobic001G408700--Sobic007G118200 Sobic001G408700--Sobic006G267300 Sobic001G408700--Sobic002G197100 Sobic004G283000 Sobic004G283000 Sobic001G408700--Sobic004G283000 Sobic001G408700--Sobic010G245000 Sobic010G223400 Sobic010G223400 Sobic001G193100--Sobic010G223400 Sobic003G394200 Sobic003G394200 Sobic001G193100--Sobic003G394200 Sobic001G012900 Sobic001G012900 Sobic001G193100--Sobic001G012900 Sobic001G061200 Sobic001G061200 Sobic001G193100--Sobic001G061200 Sobic007G173700 Sobic007G173700 Sobic001G193100--Sobic007G173700 Sobic001G193100--Sobic004G084500 Sobic004G060300 Sobic004G060300 Sobic001G193100--Sobic004G060300 Sobic004G078700 Sobic004G078700 Sobic001G193100--Sobic004G078700 Sobic001G193100--Sobic010G074900 Sobic004G084500--Sobic003G394200 Sobic004G084500--Sobic004G060300 Sobic009G122500 Sobic009G122500 Sobic004G084500--Sobic009G122500 Sobic004G084500--Sobic001G193100 Sobic004G345400 Sobic004G345400 Sobic004G084500--Sobic004G345400 Sobic004G084500--Sobic003G398400 Sobic004G084500--Sobic010G074900 Sobic006G128100 Sobic006G128100 Sobic004G084500--Sobic006G128100 Sobic006G224300 Sobic006G224300 Sobic004G084500--Sobic006G224300 Sobic009G040800 Sobic009G040800 Sobic006G091000--Sobic009G040800 Sobic005G178950 Sobic005G178950 Sobic006G091000--Sobic005G178950 Sobic004G353400 Sobic004G353400 Sobic006G091000--Sobic004G353400 Sobic006G091000--Sobic005G040900 Sobic004G347100 Sobic004G347100 Sobic006G091000--Sobic004G347100 Sobic006G091000--Sobic010G074900 Sobic007G139400 Sobic007G139400 Sobic006G091000--Sobic007G139400 Sobic010G172400 Sobic010G172400 Sobic006G091000--Sobic010G172400 Sobic005G114400 Sobic005G114400 Sobic006G091000--Sobic005G114400 Sobic005G040900--Sobic009G040800 Sobic005G040900--Sobic006G091000 Sobic005G040900--Sobic004G347100 Sobic005G040900--Sobic007G139400 Sobic005G040900--Sobic010G074900 Sobic005G040900--Sobic003G205501 Sobic005G040900--Sobic004G345400 Sobic001G472100 Sobic001G472100 Sobic005G040900--Sobic001G472100 Sobic009G129600 Sobic009G129600 Sobic005G040900--Sobic009G129600 Sobic004G007300--Sobic002G197100 Sobic004G007300--Sobic001G408700 Sobic004G007300--Sobic004G345700 Sobic004G007300--Sobic006G092800 Sobic004G350100 Sobic004G350100 Sobic004G007300--Sobic004G350100 Sobic006G173100 Sobic006G173100 Sobic004G007300--Sobic006G173100 Sobic004G007300--Sobic004G283000 Sobic008G129100 Sobic008G129100 Sobic004G007300--Sobic008G129100 Sobic004G007300--Sobic001G056200 Sobic004G218300 Sobic004G218300 Sobic003G398400--Sobic004G218300 Sobic006G130200 Sobic006G130200 Sobic003G398400--Sobic006G130200 Sobic003G398400--Sobic004G084500 Sobic003G398400--Sobic003G394200 Sobic002G164300 Sobic002G164300 Sobic003G398400--Sobic002G164300 Sobic010G213500 Sobic010G213500 Sobic003G398400--Sobic010G213500 Sobic003G398400--Sobic010G074900 Sobic004G122900 Sobic004G122900 Sobic003G398400--Sobic004G122900 Sobic003G407100 Sobic003G407100 Sobic003G398400--Sobic003G407100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.