Gene annotation
Transcriptome id Sobic.001G193100.2
Synonym Sb01g017010
Functional annotation expressed protein
UniProt A0A1Z5S6S5
Pfam PF06552
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G41950 : Tetratricopeptide repeat (TPR)-like superfamily protein
RAP-DB (Rice) LOC_Os10g37430.1 : expressed protein
MaizeGDB (Corn) Zm00025a006285 , Zm00025a017414
Brachypodium KQJ97474
Barley HORVU1Hr1G048000.22 , HORVU1Hr1G048000.23 , HORVU1Hr1G048000.20 , HORVU1Hr1G048000.21 , HORVU1Hr1G048000.18 , HORVU1Hr1G048000.19 , HORVU1Hr1G048000.13 , HORVU1Hr1G048000.12 , HORVU1Hr1G048000.11 , HORVU1Hr1G048000.10 , HORVU1Hr1G048000.17 , HORVU1Hr1G048000.16 , HORVU1Hr1G048000.15 , HORVU1Hr1G048000.14 , HORVU1Hr1G048000.9 , HORVU1Hr1G048000.8 , HORVU1Hr1G048000.3 , HORVU1Hr1G048000.7 , HORVU1Hr1G048000.6 , HORVU1Hr1G048000.5 , HORVU1Hr1G048000.4
Wheat TraesCS1D02G184900 , TraesCS4B02G397700 , TraesCS1B02G199200 , TraesCS1A02G181600
Populus -


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cDNA sequences
Sobic.001G193100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G223400 expressed protein -
2 Sobic.003G394200 vacuolar protein sorting-associated protein 53, putative, expressed -
3 Sobic.001G012900 brefeldin A-sensitive Golgi protein-like, putative, expressed -
4 Sobic.001G061200 25.3 kDa vesicle transport protein, putative, expressed K08517: vesicle transport protein SEC22
5 Sobic.007G173700 WD domain, G-beta repeat domain containing protein, expressed -
6 Sobic.004G084500 GPI-anchor transamidase precursor, putative, expressed K05290: GPI-anchor transamidase subunit K
7 Sobic.004G060300 DNA binding protein, putative, expressed -
8 Sobic.004G078700 tubulin binding cofactor C, putative, expressed K16810: TBCC domain-containing protein 1
9 Sobic.010G074900 G protein coupled receptor, putative, expressed -
10 Sobic.009G122500 expressed protein -
11 Sobic.001G023100 ACBP4, putative, expressed -
12 Sobic.003G270600 adaptor complexes medium subunit family domain containing protein, expressed K12393: AP-1 complex subunit mu
13 Sobic.001G122000 oxysterol-binding protein, putative, expressed -
14 Sobic.005G114500 growth regulator related protein, putative, expressed -
15 Sobic.006G128100 lipase, putative, expressed -
16 Sobic.001G335000 erlin-2 precursor, putative, expressed -
17 Sobic.003G314300 WD domain, G-beta repeat domain containing protein, expressed -
18 Sobic.001G474400 conserved oligomeric Golgi complex component 8, putative, expressed -
19 Sobic.005G110499 - K14006: protein transport protein SEC23
20 Sobic.006G222500 expressed protein -


Gene co-expression network
sample Sobic001G193100 Sobic001G193100 Sobic010G223400 Sobic010G223400 Sobic001G193100--Sobic010G223400 Sobic003G394200 Sobic003G394200 Sobic001G193100--Sobic003G394200 Sobic001G012900 Sobic001G012900 Sobic001G193100--Sobic001G012900 Sobic001G061200 Sobic001G061200 Sobic001G193100--Sobic001G061200 Sobic007G173700 Sobic007G173700 Sobic001G193100--Sobic007G173700 Sobic004G084500 Sobic004G084500 Sobic001G193100--Sobic004G084500 Sobic004G060300 Sobic004G060300 Sobic001G193100--Sobic004G060300 Sobic004G078700 Sobic004G078700 Sobic001G193100--Sobic004G078700 Sobic010G074900 Sobic010G074900 Sobic001G193100--Sobic010G074900 Sobic009G122500 Sobic009G122500 Sobic010G223400--Sobic009G122500 Sobic010G223400--Sobic003G394200 Sobic005G059500 Sobic005G059500 Sobic010G223400--Sobic005G059500 Sobic010G223400--Sobic001G193100 Sobic003G182300 Sobic003G182300 Sobic010G223400--Sobic003G182300 Sobic005G114500 Sobic005G114500 Sobic010G223400--Sobic005G114500 Sobic001G474400 Sobic001G474400 Sobic010G223400--Sobic001G474400 Sobic010G223400--Sobic004G078700 Sobic010G223400--Sobic001G012900 Sobic003G394200--Sobic004G084500 Sobic006G203300 Sobic006G203300 Sobic003G394200--Sobic006G203300 Sobic006G128100 Sobic006G128100 Sobic003G394200--Sobic006G128100 Sobic003G394200--Sobic010G223400 Sobic001G308400 Sobic001G308400 Sobic003G394200--Sobic001G308400 Sobic009G049400 Sobic009G049400 Sobic003G394200--Sobic009G049400 Sobic003G270600 Sobic003G270600 Sobic003G394200--Sobic003G270600 Sobic003G189600 Sobic003G189600 Sobic003G394200--Sobic003G189600 Sobic001G369000 Sobic001G369000 Sobic003G394200--Sobic001G369000 Sobic003G293000 Sobic003G293000 Sobic001G012900--Sobic003G293000 Sobic001G012900--Sobic001G193100 Sobic001G012900--Sobic005G059500 Sobic001G161700 Sobic001G161700 Sobic001G012900--Sobic001G161700 Sobic001G012900--Sobic004G060300 Sobic001G012900--Sobic010G223400 Sobic003G346400 Sobic003G346400 Sobic001G012900--Sobic003G346400 Sobic001G335000 Sobic001G335000 Sobic001G012900--Sobic001G335000 Sobic001G012900--Sobic009G122500 Sobic001G061200--Sobic001G193100 Sobic001G061200--Sobic007G173700 Sobic003G222700 Sobic003G222700 Sobic001G061200--Sobic003G222700 Sobic009G207200 Sobic009G207200 Sobic001G061200--Sobic009G207200 Sobic008G129600 Sobic008G129600 Sobic001G061200--Sobic008G129600 Sobic002G276800 Sobic002G276800 Sobic001G061200--Sobic002G276800 Sobic002G029300 Sobic002G029300 Sobic001G061200--Sobic002G029300 Sobic003G148900 Sobic003G148900 Sobic001G061200--Sobic003G148900 Sobic001G023100 Sobic001G023100 Sobic001G061200--Sobic001G023100 Sobic007G173700--Sobic002G029300 Sobic004G000100 Sobic004G000100 Sobic007G173700--Sobic004G000100 Sobic007G173700--Sobic001G023100 Sobic007G173700--Sobic001G193100 Sobic007G173700--Sobic001G161700 Sobic007G173700--Sobic001G061200 Sobic002G141700 Sobic002G141700 Sobic007G173700--Sobic002G141700 Sobic001G049400 Sobic001G049400 Sobic007G173700--Sobic001G049400 Sobic007G173700--Sobic003G394200 Sobic004G084500--Sobic003G394200 Sobic004G084500--Sobic004G060300 Sobic004G084500--Sobic009G122500 Sobic004G084500--Sobic001G193100 Sobic004G345400 Sobic004G345400 Sobic004G084500--Sobic004G345400 Sobic003G398400 Sobic003G398400 Sobic004G084500--Sobic003G398400 Sobic004G084500--Sobic010G074900 Sobic004G084500--Sobic006G128100 Sobic006G224300 Sobic006G224300 Sobic004G084500--Sobic006G224300 Sobic007G118500 Sobic007G118500 Sobic004G060300--Sobic007G118500 Sobic004G060300--Sobic009G122500 Sobic003G394500 Sobic003G394500 Sobic004G060300--Sobic003G394500 Sobic004G060300--Sobic001G335000 Sobic004G060300--Sobic003G346400 Sobic007G030100 Sobic007G030100 Sobic004G060300--Sobic007G030100 Sobic001G389200 Sobic001G389200 Sobic004G060300--Sobic001G389200 Sobic004G060300--Sobic004G084500 Sobic004G060300--Sobic001G012900 Sobic004G078700--Sobic001G389200 Sobic001G465400 Sobic001G465400 Sobic004G078700--Sobic001G465400 Sobic004G100200 Sobic004G100200 Sobic004G078700--Sobic004G100200 Sobic004G078700--Sobic010G223400 Sobic002G355800 Sobic002G355800 Sobic004G078700--Sobic002G355800 Sobic004G254800 Sobic004G254800 Sobic004G078700--Sobic004G254800 Sobic004G078700--Sobic007G118500 Sobic001G378200 Sobic001G378200 Sobic004G078700--Sobic001G378200 Sobic003G316200 Sobic003G316200 Sobic004G078700--Sobic003G316200 Sobic004G345700 Sobic004G345700 Sobic010G074900--Sobic004G345700 Sobic003G205501 Sobic003G205501 Sobic010G074900--Sobic003G205501 Sobic001G408700 Sobic001G408700 Sobic010G074900--Sobic001G408700 Sobic010G074900--Sobic001G193100 Sobic010G074900--Sobic004G084500 Sobic006G091000 Sobic006G091000 Sobic010G074900--Sobic006G091000 Sobic005G040900 Sobic005G040900 Sobic010G074900--Sobic005G040900 Sobic004G007300 Sobic004G007300 Sobic010G074900--Sobic004G007300 Sobic010G074900--Sobic003G398400
Octagon: transcription factors


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