Gene annotation
Transcriptome id Sobic.001G122000.1,Sobic.001G122000.3,Sobic.001G122000.2
Synonym ORP1C, Sb01g010720
Functional annotation oxysterol-binding protein, putative, expressed
UniProt C5WNR9
Pfam PF15413 PF01237
Panther DB PTHR10972 PTHR10972:SF100
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G08180 : OSBP(oxysterol binding protein)-related protein 1C
RAP-DB (Rice) LOC_Os03g49770.1 : oxysterol-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a007772 , Zm00025a017038
Brachypodium KQK13570
Barley HORVU2Hr1G031380.3 , HORVU2Hr1G031380.2 , HORVU2Hr1G031380.1 , HORVU6Hr1G024620.1 , HORVU3Hr1G049220.1
Wheat TraesCS4D02G039500 , TraesCS4D02G039500 , TraesCS4A02G271700 , TraesCS4A02G271700 , TraesCS4A02G271700 , TraesCS4B02G042300 , TraesCS4B02G042300 , TraesCS4B02G042300
Populus PNT48622 , PNT48624 , PNT48621 , PNT48623


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cDNA sequences
Sobic.001G122000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G193100 expressed protein -
2 Sobic.003G270600 adaptor complexes medium subunit family domain containing protein, expressed K12393: AP-1 complex subunit mu
3 Sobic.008G140400 diacylglycerol kinase 1, putative, expressed K00901: dgkA, diacylglycerol kinase (ATP)
4 Sobic.004G236200 SEC6, putative, expressed K06110: EXOC3, exocyst complex component 3
5 Sobic.004G228800 LMBR1 integral membrane protein, putative, expressed -
6 Sobic.003G394200 vacuolar protein sorting-associated protein 53, putative, expressed -
7 Sobic.002G431000 transporter, putative, expressed -
8 Sobic.007G173700 WD domain, G-beta repeat domain containing protein, expressed -
9 Sobic.001G005600 CBS domain containing membrane protein, putative, expressed -
10 Sobic.006G222500 expressed protein -
11 Sobic.001G061200 25.3 kDa vesicle transport protein, putative, expressed K08517: vesicle transport protein SEC22
12 Sobic.006G203300 GPR89A, putative, expressed -
13 Sobic.001G023100 ACBP4, putative, expressed -
14 Sobic.009G226400 dynamin family protein, putative, expressed -
15 Sobic.006G175400 OsFBK22 - F-box domain and kelch repeat containing protein, expressed -
16 Sobic.004G323700 zinc finger family protein, putative, expressed -
17 Sobic.001G378200 tetratricopeptide repeat domain containing protein, expressed -
18 Sobic.009G160600 Yip1 domain containing protein, expressed -
19 Sobic.004G084500 GPI-anchor transamidase precursor, putative, expressed K05290: GPI-anchor transamidase subunit K
20 Sobic.003G273500 expressed protein -


Gene co-expression network
sample Sobic001G122000 Sobic001G122000 Sobic001G193100 Sobic001G193100 Sobic001G122000--Sobic001G193100 Sobic003G270600 Sobic003G270600 Sobic001G122000--Sobic003G270600 Sobic008G140400 Sobic008G140400 Sobic001G122000--Sobic008G140400 Sobic004G236200 Sobic004G236200 Sobic001G122000--Sobic004G236200 Sobic004G228800 Sobic004G228800 Sobic001G122000--Sobic004G228800 Sobic003G394200 Sobic003G394200 Sobic001G122000--Sobic003G394200 Sobic002G431000 Sobic002G431000 Sobic001G122000--Sobic002G431000 Sobic007G173700 Sobic007G173700 Sobic001G122000--Sobic007G173700 Sobic001G005600 Sobic001G005600 Sobic001G122000--Sobic001G005600 Sobic010G223400 Sobic010G223400 Sobic001G193100--Sobic010G223400 Sobic001G193100--Sobic003G394200 Sobic001G012900 Sobic001G012900 Sobic001G193100--Sobic001G012900 Sobic001G061200 Sobic001G061200 Sobic001G193100--Sobic001G061200 Sobic001G193100--Sobic007G173700 Sobic004G084500 Sobic004G084500 Sobic001G193100--Sobic004G084500 Sobic004G060300 Sobic004G060300 Sobic001G193100--Sobic004G060300 Sobic004G078700 Sobic004G078700 Sobic001G193100--Sobic004G078700 Sobic010G074900 Sobic010G074900 Sobic001G193100--Sobic010G074900 Sobic003G270600--Sobic004G236200 Sobic003G270600--Sobic003G394200 Sobic009G229600 Sobic009G229600 Sobic003G270600--Sobic009G229600 Sobic003G427600 Sobic003G427600 Sobic003G270600--Sobic003G427600 Sobic009G226400 Sobic009G226400 Sobic003G270600--Sobic009G226400 Sobic004G039600 Sobic004G039600 Sobic003G270600--Sobic004G039600 Sobic001G369000 Sobic001G369000 Sobic003G270600--Sobic001G369000 Sobic009G049400 Sobic009G049400 Sobic003G270600--Sobic009G049400 Sobic003G270600--Sobic004G228800 Sobic008G140400--Sobic001G005600 Sobic008G140400--Sobic007G173700 Sobic006G222500 Sobic006G222500 Sobic008G140400--Sobic006G222500 Sobic008G140400--Sobic001G122000 Sobic001G023100 Sobic001G023100 Sobic008G140400--Sobic001G023100 Sobic002G419000 Sobic002G419000 Sobic008G140400--Sobic002G419000 Sobic002G357900 Sobic002G357900 Sobic008G140400--Sobic002G357900 Sobic008G140400--Sobic001G193100 Sobic003G199500 Sobic003G199500 Sobic008G140400--Sobic003G199500 Sobic004G236200--Sobic003G270600 Sobic001G056800 Sobic001G056800 Sobic004G236200--Sobic001G056800 Sobic006G077300 Sobic006G077300 Sobic004G236200--Sobic006G077300 Sobic004G236200--Sobic004G228800 Sobic006G203300 Sobic006G203300 Sobic004G236200--Sobic006G203300 Sobic004G236200--Sobic003G427600 Sobic004G236200--Sobic003G394200 Sobic007G205900 Sobic007G205900 Sobic004G236200--Sobic007G205900 Sobic002G156000 Sobic002G156000 Sobic004G236200--Sobic002G156000 Sobic004G261600 Sobic004G261600 Sobic004G228800--Sobic004G261600 Sobic010G261600 Sobic010G261600 Sobic004G228800--Sobic010G261600 Sobic004G323700 Sobic004G323700 Sobic004G228800--Sobic004G323700 Sobic010G278200 Sobic010G278200 Sobic004G228800--Sobic010G278200 Sobic004G228800--Sobic004G236200 Sobic006G131000 Sobic006G131000 Sobic004G228800--Sobic006G131000 Sobic005G177700 Sobic005G177700 Sobic004G228800--Sobic005G177700 Sobic007G056600 Sobic007G056600 Sobic004G228800--Sobic007G056600 Sobic003G126300 Sobic003G126300 Sobic004G228800--Sobic003G126300 Sobic003G394200--Sobic004G084500 Sobic003G394200--Sobic006G203300 Sobic006G128100 Sobic006G128100 Sobic003G394200--Sobic006G128100 Sobic003G394200--Sobic010G223400 Sobic001G308400 Sobic001G308400 Sobic003G394200--Sobic001G308400 Sobic003G394200--Sobic009G049400 Sobic003G394200--Sobic003G270600 Sobic003G189600 Sobic003G189600 Sobic003G394200--Sobic003G189600 Sobic003G394200--Sobic001G369000 Sobic010G184300 Sobic010G184300 Sobic002G431000--Sobic010G184300 Sobic002G295700 Sobic002G295700 Sobic002G431000--Sobic002G295700 Sobic003G377000 Sobic003G377000 Sobic002G431000--Sobic003G377000 Sobic001G457700 Sobic001G457700 Sobic002G431000--Sobic001G457700 Sobic002G431000--Sobic004G236200 Sobic002G431000--Sobic005G177700 Sobic004G112900 Sobic004G112900 Sobic002G431000--Sobic004G112900 Sobic007G056100 Sobic007G056100 Sobic002G431000--Sobic007G056100 Sobic010G064600 Sobic010G064600 Sobic002G431000--Sobic010G064600 Sobic002G029300 Sobic002G029300 Sobic007G173700--Sobic002G029300 Sobic004G000100 Sobic004G000100 Sobic007G173700--Sobic004G000100 Sobic007G173700--Sobic001G023100 Sobic007G173700--Sobic001G193100 Sobic001G161700 Sobic001G161700 Sobic007G173700--Sobic001G161700 Sobic007G173700--Sobic001G061200 Sobic002G141700 Sobic002G141700 Sobic007G173700--Sobic002G141700 Sobic001G049400 Sobic001G049400 Sobic007G173700--Sobic001G049400 Sobic007G173700--Sobic003G394200 Sobic009G160600 Sobic009G160600 Sobic001G005600--Sobic009G160600 Sobic010G129600 Sobic010G129600 Sobic001G005600--Sobic010G129600 Sobic007G042900 Sobic007G042900 Sobic001G005600--Sobic007G042900 Sobic001G005600--Sobic008G140400 Sobic003G150900 Sobic003G150900 Sobic001G005600--Sobic003G150900 Sobic001G005600--Sobic004G323700 Sobic004G068500 Sobic004G068500 Sobic001G005600--Sobic004G068500 Sobic008G021000 Sobic008G021000 Sobic001G005600--Sobic008G021000 Sobic001G161900 Sobic001G161900 Sobic001G005600--Sobic001G161900
Octagon: transcription factors


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