Gene annotation
Transcriptome id Sobic.004G236200.1
Synonym Sb04g027870, SEC6
Functional annotation SEC6, putative, expressed
UniProt C5XYR7
Pfam PF06046
Panther DB PTHR21292 PTHR21292:SF1
NCBI CDD KOG2286; Exocyst complex subunit SEC6
KEGG Orthology K06110; EXOC3, exocyst complex component 3
Gene Ontology GO:0006887; exocytosis GO:0000145exocyst


Orthologs (automatic annotation)
TAIR AT1G71820 : SEC6
RAP-DB (Rice) LOC_Os02g51430.1 : SEC6, putative, expressed
MaizeGDB (Corn) Zm00025a033187 , Zm00025a022102
Brachypodium KQK01921
Barley HORVU6Hr1G075400.1 , HORVU6Hr1G075400.2 , HORVU6Hr1G075400.3 , HORVU6Hr1G075400.4 , HORVU6Hr1G075400.5 , HORVU6Hr1G075400.6 , HORVU6Hr1G075400.7 , HORVU6Hr1G075400.8 , HORVU6Hr1G075400.9 , HORVU6Hr1G075400.12 , HORVU6Hr1G075400.13 , HORVU6Hr1G075400.10 , HORVU6Hr1G075400.11
Wheat TraesCS6A02G305200 , TraesCS6A02G305200 , TraesCS6A02G305200 , TraesCS6B02G333500 , TraesCS6B02G333500 , TraesCS6B02G333500 , TraesCS6D02G284400 , TraesCS6D02G284400
Populus PNT07932 , PNT07933


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cDNA sequences
Sobic.004G236200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G270600 adaptor complexes medium subunit family domain containing protein, expressed K12393: AP-1 complex subunit mu
2 Sobic.001G056800 GTP binding protein, putative, expressed -
3 Sobic.006G077300 expressed protein K17637: EXOC2, exocyst complex component 2
4 Sobic.004G228800 LMBR1 integral membrane protein, putative, expressed -
5 Sobic.006G203300 GPR89A, putative, expressed -
6 Sobic.003G427600 villin protein, putative, expressed -
7 Sobic.003G394200 vacuolar protein sorting-associated protein 53, putative, expressed -
8 Sobic.007G205900 uvrB/uvrC motif family protein, expressed -
9 Sobic.002G156000 -(PubMedID : 29751546)@transporter, monovalent cation:proton antiporter-2 family, putative, expressed K14724: SLC9A8, solute carrier family 9 (sodium/hydrogen exchanger), member 8
10 Sobic.005G177700 transmembrane protein 49, putative, expressed -
11 Sobic.010G184300 glycosyltransferase family protein, putative, expressed K00771: protein xylosyltransferase
12 Sobic.001G413900 "Ca ATPase, IIB type"(PubMedID : 22196357)@calcium-transporting ATPase, endoplasmic reticulum-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
13 Sobic.004G254800 heat shock protein DnaJ, putative, expressed K19371: DnaJ homolog subfamily C member 25
14 Sobic.003G346400 vacuolar ATP synthase 98 kDa subunit, putative, expressed K02154: ATPeV0A, V-type H+-transporting ATPase subunit a
15 Sobic.004G261600 expressed protein -
16 Sobic.002G431000 transporter, putative, expressed -
17 Sobic.001G122000 oxysterol-binding protein, putative, expressed -
18 Sobic.005G090300 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed -
19 Sobic.001G478800 expressed protein -
20 Sobic.003G209200 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B


Gene co-expression network
sample Sobic004G236200 Sobic004G236200 Sobic003G270600 Sobic003G270600 Sobic004G236200--Sobic003G270600 Sobic001G056800 Sobic001G056800 Sobic004G236200--Sobic001G056800 Sobic006G077300 Sobic006G077300 Sobic004G236200--Sobic006G077300 Sobic004G228800 Sobic004G228800 Sobic004G236200--Sobic004G228800 Sobic006G203300 Sobic006G203300 Sobic004G236200--Sobic006G203300 Sobic003G427600 Sobic003G427600 Sobic004G236200--Sobic003G427600 Sobic003G394200 Sobic003G394200 Sobic004G236200--Sobic003G394200 Sobic007G205900 Sobic007G205900 Sobic004G236200--Sobic007G205900 Sobic002G156000 Sobic002G156000 Sobic004G236200--Sobic002G156000 Sobic003G270600--Sobic004G236200 Sobic003G270600--Sobic003G394200 Sobic009G229600 Sobic009G229600 Sobic003G270600--Sobic009G229600 Sobic003G270600--Sobic003G427600 Sobic009G226400 Sobic009G226400 Sobic003G270600--Sobic009G226400 Sobic004G039600 Sobic004G039600 Sobic003G270600--Sobic004G039600 Sobic001G369000 Sobic001G369000 Sobic003G270600--Sobic001G369000 Sobic009G049400 Sobic009G049400 Sobic003G270600--Sobic009G049400 Sobic003G270600--Sobic004G228800 Sobic001G056800--Sobic006G077300 Sobic005G090300 Sobic005G090300 Sobic001G056800--Sobic005G090300 Sobic001G056800--Sobic004G236200 Sobic003G209200 Sobic003G209200 Sobic001G056800--Sobic003G209200 Sobic006G021700 Sobic006G021700 Sobic001G056800--Sobic006G021700 Sobic002G340900 Sobic002G340900 Sobic001G056800--Sobic002G340900 Sobic001G056800--Sobic003G394200 Sobic001G056800--Sobic006G203300 Sobic001G056800--Sobic002G156000 Sobic006G260500 Sobic006G260500 Sobic006G077300--Sobic006G260500 Sobic006G077300--Sobic006G021700 Sobic006G077300--Sobic003G209200 Sobic006G077300--Sobic001G056800 Sobic002G401500 Sobic002G401500 Sobic006G077300--Sobic002G401500 Sobic003G114400 Sobic003G114400 Sobic006G077300--Sobic003G114400 Sobic007G005500 Sobic007G005500 Sobic006G077300--Sobic007G005500 Sobic005G062200 Sobic005G062200 Sobic006G077300--Sobic005G062200 Sobic002G042600 Sobic002G042600 Sobic006G077300--Sobic002G042600 Sobic004G261600 Sobic004G261600 Sobic004G228800--Sobic004G261600 Sobic010G261600 Sobic010G261600 Sobic004G228800--Sobic010G261600 Sobic004G323700 Sobic004G323700 Sobic004G228800--Sobic004G323700 Sobic010G278200 Sobic010G278200 Sobic004G228800--Sobic010G278200 Sobic004G228800--Sobic004G236200 Sobic006G131000 Sobic006G131000 Sobic004G228800--Sobic006G131000 Sobic005G177700 Sobic005G177700 Sobic004G228800--Sobic005G177700 Sobic007G056600 Sobic007G056600 Sobic004G228800--Sobic007G056600 Sobic003G126300 Sobic003G126300 Sobic004G228800--Sobic003G126300 Sobic006G203300--Sobic003G394200 Sobic003G346400 Sobic003G346400 Sobic006G203300--Sobic003G346400 Sobic010G169900 Sobic010G169900 Sobic006G203300--Sobic010G169900 Sobic006G203300--Sobic004G236200 Sobic001G445500 Sobic001G445500 Sobic006G203300--Sobic001G445500 Sobic004G254800 Sobic004G254800 Sobic006G203300--Sobic004G254800 Sobic001G308400 Sobic001G308400 Sobic006G203300--Sobic001G308400 Sobic001G474400 Sobic001G474400 Sobic006G203300--Sobic001G474400 Sobic003G036500 Sobic003G036500 Sobic006G203300--Sobic003G036500 Sobic003G427600--Sobic009G229600 Sobic003G427600--Sobic006G131000 Sobic003G427600--Sobic003G270600 Sobic003G427600--Sobic004G236200 Sobic003G427600--Sobic001G369000 Sobic001G281100 Sobic001G281100 Sobic003G427600--Sobic001G281100 Sobic003G427600--Sobic006G077300 Sobic004G344901 Sobic004G344901 Sobic003G427600--Sobic004G344901 Sobic003G427600--Sobic009G049400 Sobic004G084500 Sobic004G084500 Sobic003G394200--Sobic004G084500 Sobic003G394200--Sobic006G203300 Sobic006G128100 Sobic006G128100 Sobic003G394200--Sobic006G128100 Sobic010G223400 Sobic010G223400 Sobic003G394200--Sobic010G223400 Sobic003G394200--Sobic001G308400 Sobic003G394200--Sobic009G049400 Sobic003G394200--Sobic003G270600 Sobic003G189600 Sobic003G189600 Sobic003G394200--Sobic003G189600 Sobic003G394200--Sobic001G369000 Sobic007G205900--Sobic010G261600 Sobic007G205900--Sobic004G236200 Sobic007G205900--Sobic003G270600 Sobic003G195500 Sobic003G195500 Sobic007G205900--Sobic003G195500 Sobic007G205900--Sobic004G228800 Sobic004G002400 Sobic004G002400 Sobic007G205900--Sobic004G002400 Sobic005G059600 Sobic005G059600 Sobic007G205900--Sobic005G059600 Sobic006G271200 Sobic006G271200 Sobic007G205900--Sobic006G271200 Sobic006G034000 Sobic006G034000 Sobic007G205900--Sobic006G034000 Sobic001G413900 Sobic001G413900 Sobic002G156000--Sobic001G413900 Sobic010G072800 Sobic010G072800 Sobic002G156000--Sobic010G072800 Sobic004G209800 Sobic004G209800 Sobic002G156000--Sobic004G209800 Sobic004G004200 Sobic004G004200 Sobic002G156000--Sobic004G004200 Sobic002G156000--Sobic004G261600 Sobic002G156000--Sobic004G236200 Sobic004G016000 Sobic004G016000 Sobic002G156000--Sobic004G016000 Sobic002G430000 Sobic002G430000 Sobic002G156000--Sobic002G430000 Sobic002G156000--Sobic001G281100
Octagon: transcription factors


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