Gene annotation
Transcriptome id Sobic.005G090300.1
Synonym
Functional annotation glycerophosphoryl diester phosphodiesterase family protein, putative, expressed
UniProt C5Y876
Pfam -
Panther DB PTHR23344 PTHR23344:SF28
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008889; glycerophosphodiester phosphodiesterase activity


Orthologs (automatic annotation)
TAIR AT1G71340 : PLC-like phosphodiesterases superfamily protein
RAP-DB (Rice) LOC_Os11g12800.1 : glycerophosphoryl diester phosphodiesterase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a029522
Brachypodium -
Barley -
Wheat TraesCS4A02G225200 , TraesCS4B02G091000 , TraesCS4B02G091000 , TraesCS4A02G225200 , TraesCS4B02G091000 , TraesCS4D02G088100 , TraesCS4D02G088100 , TraesCS4D02G088100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G056800 GTP binding protein, putative, expressed -
2 Sobic.005G062200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
3 Sobic.003G114400 expressed protein K05288: GPI ethanolamine phosphate transferase 3 subunit O
4 Sobic.001G263600 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
5 Sobic.004G223300 ARF GTPase-activating domain-containing protein, putative, expressed K12489: Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
6 Sobic.002G301100 PQ loop repeat domain containing protein, expressed K09660: mannose-P-dolichol utilization defect 1
7 Sobic.002G241600 - -
8 Sobic.008G088872 - -
9 Sobic.003G365100 hydrolase, alpha/beta fold family, putative, expressed -
10 Sobic.002G426300 actin, putative, expressed K17260: ACTR2, actin-related protein 2
11 Sobic.006G077300 expressed protein K17637: EXOC2, exocyst complex component 2
12 Sobic.006G174850 - K15193: SPTY2D1, protein SPT2
13 Sobic.004G228800 LMBR1 integral membrane protein, putative, expressed -
14 Sobic.006G260500 expressed protein -
15 Sobic.003G209200 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
16 Sobic.006G203300 GPR89A, putative, expressed -
17 Sobic.001G255800 CPuORF15 - conserved peptide uORF-containing transcript, expressed -
18 Sobic.002G156000 -(PubMedID : 29751546)@transporter, monovalent cation:proton antiporter-2 family, putative, expressed K14724: SLC9A8, solute carrier family 9 (sodium/hydrogen exchanger), member 8
19 Sobic.001G065100 cullin, putative, expressed K10609: cullin 4
20 Sobic.002G042600 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7


Gene co-expression network
sample Sobic005G090300 Sobic005G090300 Sobic001G056800 Sobic001G056800 Sobic005G090300--Sobic001G056800 Sobic005G062200 Sobic005G062200 Sobic005G090300--Sobic005G062200 Sobic003G114400 Sobic003G114400 Sobic005G090300--Sobic003G114400 Sobic001G263600 Sobic001G263600 Sobic005G090300--Sobic001G263600 Sobic004G223300 Sobic004G223300 Sobic005G090300--Sobic004G223300 Sobic002G301100 Sobic002G301100 Sobic005G090300--Sobic002G301100 Sobic002G241600 Sobic002G241600 Sobic005G090300--Sobic002G241600 Sobic008G088872 Sobic008G088872 Sobic005G090300--Sobic008G088872 Sobic003G365100 Sobic003G365100 Sobic005G090300--Sobic003G365100 Sobic006G077300 Sobic006G077300 Sobic001G056800--Sobic006G077300 Sobic001G056800--Sobic005G090300 Sobic004G236200 Sobic004G236200 Sobic001G056800--Sobic004G236200 Sobic003G209200 Sobic003G209200 Sobic001G056800--Sobic003G209200 Sobic006G021700 Sobic006G021700 Sobic001G056800--Sobic006G021700 Sobic002G340900 Sobic002G340900 Sobic001G056800--Sobic002G340900 Sobic003G394200 Sobic003G394200 Sobic001G056800--Sobic003G394200 Sobic006G203300 Sobic006G203300 Sobic001G056800--Sobic006G203300 Sobic002G156000 Sobic002G156000 Sobic001G056800--Sobic002G156000 Sobic005G062200--Sobic008G088872 Sobic005G062200--Sobic001G263600 Sobic002G401500 Sobic002G401500 Sobic005G062200--Sobic002G401500 Sobic006G184900 Sobic006G184900 Sobic005G062200--Sobic006G184900 Sobic002G042600 Sobic002G042600 Sobic005G062200--Sobic002G042600 Sobic005G062200--Sobic003G209200 Sobic005G062200--Sobic003G114400 Sobic001G065100 Sobic001G065100 Sobic005G062200--Sobic001G065100 Sobic002G335600 Sobic002G335600 Sobic005G062200--Sobic002G335600 Sobic006G260500 Sobic006G260500 Sobic003G114400--Sobic006G260500 Sobic003G114400--Sobic005G062200 Sobic003G114400--Sobic008G088872 Sobic003G114400--Sobic006G077300 Sobic003G114400--Sobic005G090300 Sobic003G114400--Sobic006G184900 Sobic002G252400 Sobic002G252400 Sobic003G114400--Sobic002G252400 Sobic003G316200 Sobic003G316200 Sobic003G114400--Sobic003G316200 Sobic004G241900 Sobic004G241900 Sobic003G114400--Sobic004G241900 Sobic001G263600--Sobic008G088872 Sobic002G429300 Sobic002G429300 Sobic001G263600--Sobic002G429300 Sobic002G142900 Sobic002G142900 Sobic001G263600--Sobic002G142900 Sobic001G263600--Sobic005G062200 Sobic008G098900 Sobic008G098900 Sobic001G263600--Sobic008G098900 Sobic001G263600--Sobic002G042600 Sobic001G273700 Sobic001G273700 Sobic001G263600--Sobic001G273700 Sobic003G072200 Sobic003G072200 Sobic001G263600--Sobic003G072200 Sobic009G131300 Sobic009G131300 Sobic001G263600--Sobic009G131300 Sobic004G147500 Sobic004G147500 Sobic004G223300--Sobic004G147500 Sobic004G223300--Sobic002G340900 Sobic004G223300--Sobic001G065100 Sobic004G223300--Sobic002G042600 Sobic008G124800 Sobic008G124800 Sobic004G223300--Sobic008G124800 Sobic004G223300--Sobic005G062200 Sobic003G039000 Sobic003G039000 Sobic004G223300--Sobic003G039000 Sobic001G382600 Sobic001G382600 Sobic004G223300--Sobic001G382600 Sobic004G223300--Sobic002G401500 Sobic006G106300 Sobic006G106300 Sobic002G301100--Sobic006G106300 Sobic001G474400 Sobic001G474400 Sobic002G301100--Sobic001G474400 Sobic002G301100--Sobic006G203300 Sobic002G301100--Sobic005G090300 Sobic002G301100--Sobic006G260500 Sobic001G399700 Sobic001G399700 Sobic002G301100--Sobic001G399700 Sobic004G096700 Sobic004G096700 Sobic002G301100--Sobic004G096700 Sobic001G205100 Sobic001G205100 Sobic002G301100--Sobic001G205100 Sobic007G173700 Sobic007G173700 Sobic002G301100--Sobic007G173700 Sobic002G241600--Sobic005G090300 Sobic001G308400 Sobic001G308400 Sobic002G241600--Sobic001G308400 Sobic002G241600--Sobic004G223300 Sobic001G014300 Sobic001G014300 Sobic002G241600--Sobic001G014300 Sobic002G241600--Sobic004G147500 Sobic002G241600--Sobic005G062200 Sobic001G255800 Sobic001G255800 Sobic002G241600--Sobic001G255800 Sobic002G241600--Sobic003G114400 Sobic001G097900 Sobic001G097900 Sobic002G241600--Sobic001G097900 Sobic005G162500 Sobic005G162500 Sobic008G088872--Sobic005G162500 Sobic001G370900 Sobic001G370900 Sobic008G088872--Sobic001G370900 Sobic008G088872--Sobic009G131300 Sobic008G088872--Sobic006G184900 Sobic008G088872--Sobic005G062200 Sobic008G088872--Sobic001G263600 Sobic008G088872--Sobic002G042600 Sobic008G088872--Sobic002G429300 Sobic008G088872--Sobic002G335600 Sobic003G365100--Sobic003G316200 Sobic002G306100 Sobic002G306100 Sobic003G365100--Sobic002G306100 Sobic001G253300 Sobic001G253300 Sobic003G365100--Sobic001G253300 Sobic005G177700 Sobic005G177700 Sobic003G365100--Sobic005G177700 Sobic003G156400 Sobic003G156400 Sobic003G365100--Sobic003G156400 Sobic007G182000 Sobic007G182000 Sobic003G365100--Sobic007G182000 Sobic006G250800 Sobic006G250800 Sobic003G365100--Sobic006G250800 Sobic001G188400 Sobic001G188400 Sobic003G365100--Sobic001G188400 Sobic003G365100--Sobic005G090300
Octagon: transcription factors


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