Gene annotation
Transcriptome id Sobic.006G174850.1
Synonym -
Functional annotation -
UniProt Q6JAH2 , H0I4E3 , A0A1Z5RFA3
Pfam PF08243
Panther DB PTHR22691
NCBI CDD -
KEGG Orthology K15193; SPTY2D1, protein SPT2
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G37860 : SPT2 chromatin protein
RAP-DB (Rice) LOC_Os11g19130.1 : expressed protein
MaizeGDB (Corn) Zm00025a056842 , Zm00025a010255 , Zm00025a056841
Brachypodium PNT70720 , KQK04909 , KQK04912 , KQK04911 , KQK04910 , KQK04913
Barley -
Wheat TraesCS6D02G092600 , TraesCS6D02G092600 , TraesCS6D02G092600 , TraesCS6A02G104000 , TraesCS6A02G104000 , TraesCS6A02G104000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G218000 chloride transporter, chloride channel family, putative, expressed -
2 Sobic.006G131000 expressed protein K11968: ariadne-1
3 Sobic.009G044800 cullin, putative, expressed K03347: CUL1, cullin 1
4 Sobic.001G273700 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
5 Sobic.003G379200 wound-responsive family protein, putative, expressed -
6 Sobic.005G062200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
7 Sobic.001G263600 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
8 Sobic.007G132100 myrosinase precursor, putative, expressed -
9 Sobic.006G240100 BRCA1-associated protein, putative, expressed K10632: BRCA1-associated protein
10 Sobic.009G249700 expressed protein -
11 Sobic.004G323700 zinc finger family protein, putative, expressed -
12 Sobic.006G163800 diacylglycerol kinase, putative, expressed -
13 Sobic.003G404500 dynamin family protein, putative, expressed K17065: dynamin 1-like protein
14 Sobic.008G083200 transcription factor, putative, expressed K09060: plant G-box-binding factor
15 Sobic.003G189600 M16 domain containing zinc peptidase, putative, expressed -
16 Sobic.004G265500 SET domain protein SDG117, putative, expressed -
17 Sobic.002G042600 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
18 Sobic.001G065100 cullin, putative, expressed K10609: cullin 4
19 Sobic.007G172200 inositol or phosphatidylinositol phosphatase/ phosphoric monoester hydrolase, putative, expressed K18081: myotubularin-related protein 1/2
20 Sobic.003G209200 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B


Gene co-expression network
sample Sobic006G174850 Sobic006G174850 Sobic007G218000 Sobic007G218000 Sobic006G174850--Sobic007G218000 Sobic006G131000 Sobic006G131000 Sobic006G174850--Sobic006G131000 Sobic009G044800 Sobic009G044800 Sobic006G174850--Sobic009G044800 Sobic001G273700 Sobic001G273700 Sobic006G174850--Sobic001G273700 Sobic003G379200 Sobic003G379200 Sobic006G174850--Sobic003G379200 Sobic005G062200 Sobic005G062200 Sobic006G174850--Sobic005G062200 Sobic001G263600 Sobic001G263600 Sobic006G174850--Sobic001G263600 Sobic007G132100 Sobic007G132100 Sobic006G174850--Sobic007G132100 Sobic006G240100 Sobic006G240100 Sobic006G174850--Sobic006G240100 Sobic007G218000--Sobic007G132100 Sobic004G072100 Sobic004G072100 Sobic007G218000--Sobic004G072100 Sobic002G112700 Sobic002G112700 Sobic007G218000--Sobic002G112700 Sobic007G218000--Sobic006G131000 Sobic007G218000--Sobic009G044800 Sobic010G204400 Sobic010G204400 Sobic007G218000--Sobic010G204400 Sobic006G012500 Sobic006G012500 Sobic007G218000--Sobic006G012500 Sobic009G249700 Sobic009G249700 Sobic007G218000--Sobic009G249700 Sobic009G092400 Sobic009G092400 Sobic007G218000--Sobic009G092400 Sobic006G131000--Sobic007G218000 Sobic006G131000--Sobic007G132100 Sobic006G163800 Sobic006G163800 Sobic006G131000--Sobic006G163800 Sobic004G039600 Sobic004G039600 Sobic006G131000--Sobic004G039600 Sobic001G096000 Sobic001G096000 Sobic006G131000--Sobic001G096000 Sobic006G131000--Sobic006G174850 Sobic010G275500 Sobic010G275500 Sobic006G131000--Sobic010G275500 Sobic001G369000 Sobic001G369000 Sobic006G131000--Sobic001G369000 Sobic004G178200 Sobic004G178200 Sobic006G131000--Sobic004G178200 Sobic003G360400 Sobic003G360400 Sobic009G044800--Sobic003G360400 Sobic003G352200 Sobic003G352200 Sobic009G044800--Sobic003G352200 Sobic001G227400 Sobic001G227400 Sobic009G044800--Sobic001G227400 Sobic002G045600 Sobic002G045600 Sobic009G044800--Sobic002G045600 Sobic010G116600 Sobic010G116600 Sobic009G044800--Sobic010G116600 Sobic009G044800--Sobic007G218000 Sobic001G025000 Sobic001G025000 Sobic009G044800--Sobic001G025000 Sobic001G433800 Sobic001G433800 Sobic009G044800--Sobic001G433800 Sobic007G183900 Sobic007G183900 Sobic009G044800--Sobic007G183900 Sobic007G172200 Sobic007G172200 Sobic001G273700--Sobic007G172200 Sobic001G273700--Sobic001G263600 Sobic008G099800 Sobic008G099800 Sobic001G273700--Sobic008G099800 Sobic001G347500 Sobic001G347500 Sobic001G273700--Sobic001G347500 Sobic007G133700 Sobic007G133700 Sobic001G273700--Sobic007G133700 Sobic007G163100 Sobic007G163100 Sobic001G273700--Sobic007G163100 Sobic001G457900 Sobic001G457900 Sobic001G273700--Sobic001G457900 Sobic001G313700 Sobic001G313700 Sobic001G273700--Sobic001G313700 Sobic002G042600 Sobic002G042600 Sobic001G273700--Sobic002G042600 Sobic006G261400 Sobic006G261400 Sobic003G379200--Sobic006G261400 Sobic003G379200--Sobic009G044800 Sobic006G088200 Sobic006G088200 Sobic003G379200--Sobic006G088200 Sobic003G379200--Sobic003G360400 Sobic008G083200 Sobic008G083200 Sobic003G379200--Sobic008G083200 Sobic010G000800 Sobic010G000800 Sobic003G379200--Sobic010G000800 Sobic001G354600 Sobic001G354600 Sobic003G379200--Sobic001G354600 Sobic003G363700 Sobic003G363700 Sobic003G379200--Sobic003G363700 Sobic003G379200--Sobic006G174850 Sobic008G088872 Sobic008G088872 Sobic005G062200--Sobic008G088872 Sobic005G062200--Sobic001G263600 Sobic002G401500 Sobic002G401500 Sobic005G062200--Sobic002G401500 Sobic006G184900 Sobic006G184900 Sobic005G062200--Sobic006G184900 Sobic005G062200--Sobic002G042600 Sobic003G209200 Sobic003G209200 Sobic005G062200--Sobic003G209200 Sobic003G114400 Sobic003G114400 Sobic005G062200--Sobic003G114400 Sobic001G065100 Sobic001G065100 Sobic005G062200--Sobic001G065100 Sobic002G335600 Sobic002G335600 Sobic005G062200--Sobic002G335600 Sobic001G263600--Sobic008G088872 Sobic002G429300 Sobic002G429300 Sobic001G263600--Sobic002G429300 Sobic002G142900 Sobic002G142900 Sobic001G263600--Sobic002G142900 Sobic001G263600--Sobic005G062200 Sobic008G098900 Sobic008G098900 Sobic001G263600--Sobic008G098900 Sobic001G263600--Sobic002G042600 Sobic001G263600--Sobic001G273700 Sobic003G072200 Sobic003G072200 Sobic001G263600--Sobic003G072200 Sobic009G131300 Sobic009G131300 Sobic001G263600--Sobic009G131300 Sobic007G132100--Sobic007G218000 Sobic007G132100--Sobic004G072100 Sobic007G132100--Sobic004G039600 Sobic007G132100--Sobic004G178200 Sobic007G132100--Sobic006G131000 Sobic007G132100--Sobic006G012500 Sobic007G132100--Sobic009G044800 Sobic007G132100--Sobic008G099800 Sobic007G132100--Sobic010G204400 Sobic006G240100--Sobic009G044800 Sobic003G416700 Sobic003G416700 Sobic006G240100--Sobic003G416700 Sobic002G154000 Sobic002G154000 Sobic006G240100--Sobic002G154000 Sobic006G240100--Sobic007G132100 Sobic006G240100--Sobic007G218000 Sobic006G240100--Sobic003G360400 Sobic006G240100--Sobic010G204400 Sobic006G240100--Sobic001G354600 Sobic006G240100--Sobic004G072100
Octagon: transcription factors


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