Gene annotation
Transcriptome id Sobic.003G379200.1,Sobic.003G379200.2
Synonym Sb03g041880
Functional annotation wound-responsive family protein, putative, expressed
UniProt A0A1B6Q7D3 , C5XEL6
Pfam PF08729
Panther DB PTHR21669 PTHR21669:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G21610 : wound-responsive family protein
RAP-DB (Rice) LOC_Os05g34900.1 : wound-responsive family protein, putative, expressed
MaizeGDB (Corn) Zm00025a039493 , Zm00025a026552
Brachypodium PNT71223 , KQK06178 , KQK10907 , KQK10906
Barley HORVU1Hr1G063640.21 , HORVU1Hr1G063640.20 , HORVU1Hr1G063640.22 , HORVU1Hr1G063640.6 , HORVU1Hr1G063640.7 , HORVU1Hr1G063640.4 , HORVU1Hr1G063640.5 , HORVU1Hr1G063640.2 , HORVU1Hr1G063640.3 , HORVU1Hr1G063640.1 , HORVU1Hr1G063640.8 , HORVU1Hr1G063640.9 , HORVU3Hr1G091010.4 , HORVU3Hr1G091010.6 , HORVU3Hr1G091010.7 , HORVU3Hr1G091010.1 , HORVU3Hr1G091010.2 , HORVU3Hr1G091010.3 , HORVU3Hr1G091010.8 , HORVU1Hr1G063640.18 , HORVU1Hr1G063640.14 , HORVU1Hr1G063640.15 , HORVU1Hr1G063640.16 , HORVU1Hr1G063640.17 , HORVU1Hr1G063640.10 , HORVU1Hr1G063640.11 , HORVU1Hr1G063640.12 , HORVU1Hr1G063640.13
Wheat TraesCS3B02G440100 , TraesCS1B02G274800 , TraesCS3A02G406400 , TraesCS3A02G406400 , TraesCS1D02G264300 , TraesCS1B02G274800 , TraesCS3D02G401600 , TraesCS3D02G401600 , TraesCS1B02G274800 , TraesCS1A02G264100 , TraesCS1A02G264100 , TraesCS1A02G264100
Populus -


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cDNA sequences
Sobic.003G379200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G261400 peptidase, trypsin-like serine and cysteine proteases, putative, expressed -
2 Sobic.009G044800 cullin, putative, expressed K03347: CUL1, cullin 1
3 Sobic.006G088200 nonsense-mediated decay UPF3, putative, expressed K14328: UPF3, regulator of nonsense transcripts 3
4 Sobic.003G360400 ulp1 protease family protein, putative, expressed K08596: sentrin-specific protease 7
5 Sobic.008G083200 transcription factor, putative, expressed K09060: plant G-box-binding factor
6 Sobic.010G000800 PHD-finger domain containing protein, expressed -
7 Sobic.001G354600 SAP domain containing protein, expressed K12875: ACIN1, apoptotic chromatin condensation inducer in the nucleus
8 Sobic.003G363700 OsFBL5 - F-box domain and LRR containing protein, expressed -
9 Sobic.006G174850 - K15193: SPTY2D1, protein SPT2
10 Sobic.003G104000 expressed protein K15133: mediator of RNA polymerase II transcription subunit 17
11 Sobic.006G240100 BRCA1-associated protein, putative, expressed K10632: BRCA1-associated protein
12 Sobic.001G227400 WD domain, G-beta repeat domain containing protein, expressed -
13 Sobic.007G063000 expressed protein -
14 Sobic.001G251100 endonuclease/exonuclease/phosphatase family domain containing protein, expressed K12603: CNOT6, CCR4-NOT transcription complex subunit 6
15 Sobic.008G033900 PHD-finger family protein, expressed -
16 Sobic.006G127600 signal peptide peptidase-like 2B, putative, expressed K09597: signal peptide peptidase-like 2B
17 Sobic.002G154000 EDM2, putative, expressed -
18 Sobic.007G183900 ubiquitin family protein, putative, expressed -
19 Sobic.002G042600 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
20 Sobic.002G133300 ZOS9-20 - C2H2 zinc finger protein, expressed K14400: pre-mRNA cleavage complex 2 protein Pcf11


Gene co-expression network
sample Sobic003G379200 Sobic003G379200 Sobic006G261400 Sobic006G261400 Sobic003G379200--Sobic006G261400 Sobic009G044800 Sobic009G044800 Sobic003G379200--Sobic009G044800 Sobic006G088200 Sobic006G088200 Sobic003G379200--Sobic006G088200 Sobic003G360400 Sobic003G360400 Sobic003G379200--Sobic003G360400 Sobic008G083200 Sobic008G083200 Sobic003G379200--Sobic008G083200 Sobic010G000800 Sobic010G000800 Sobic003G379200--Sobic010G000800 Sobic001G354600 Sobic001G354600 Sobic003G379200--Sobic001G354600 Sobic003G363700 Sobic003G363700 Sobic003G379200--Sobic003G363700 Sobic006G174850 Sobic006G174850 Sobic003G379200--Sobic006G174850 Sobic006G261400--Sobic003G379200 Sobic006G127600 Sobic006G127600 Sobic006G261400--Sobic006G127600 Sobic006G267600 Sobic006G267600 Sobic006G261400--Sobic006G267600 Sobic003G104000 Sobic003G104000 Sobic006G261400--Sobic003G104000 Sobic006G261400--Sobic010G000800 Sobic002G048700 Sobic002G048700 Sobic006G261400--Sobic002G048700 Sobic001G051700 Sobic001G051700 Sobic006G261400--Sobic001G051700 Sobic004G131300 Sobic004G131300 Sobic006G261400--Sobic004G131300 Sobic003G296900 Sobic003G296900 Sobic006G261400--Sobic003G296900 Sobic009G044800--Sobic003G360400 Sobic003G352200 Sobic003G352200 Sobic009G044800--Sobic003G352200 Sobic001G227400 Sobic001G227400 Sobic009G044800--Sobic001G227400 Sobic002G045600 Sobic002G045600 Sobic009G044800--Sobic002G045600 Sobic010G116600 Sobic010G116600 Sobic009G044800--Sobic010G116600 Sobic007G218000 Sobic007G218000 Sobic009G044800--Sobic007G218000 Sobic001G025000 Sobic001G025000 Sobic009G044800--Sobic001G025000 Sobic001G433800 Sobic001G433800 Sobic009G044800--Sobic001G433800 Sobic007G183900 Sobic007G183900 Sobic009G044800--Sobic007G183900 Sobic003G095900 Sobic003G095900 Sobic006G088200--Sobic003G095900 Sobic006G088200--Sobic003G360400 Sobic001G493700 Sobic001G493700 Sobic006G088200--Sobic001G493700 Sobic001G275300 Sobic001G275300 Sobic006G088200--Sobic001G275300 Sobic002G133300 Sobic002G133300 Sobic006G088200--Sobic002G133300 Sobic006G088200--Sobic003G379200 Sobic003G214600 Sobic003G214600 Sobic006G088200--Sobic003G214600 Sobic006G088200--Sobic001G433800 Sobic006G088200--Sobic001G227400 Sobic010G112100 Sobic010G112100 Sobic003G360400--Sobic010G112100 Sobic002G154000 Sobic002G154000 Sobic003G360400--Sobic002G154000 Sobic003G360400--Sobic001G354600 Sobic003G360400--Sobic001G433800 Sobic003G389200 Sobic003G389200 Sobic003G360400--Sobic003G389200 Sobic003G360400--Sobic009G044800 Sobic005G112300 Sobic005G112300 Sobic003G360400--Sobic005G112300 Sobic007G063000 Sobic007G063000 Sobic003G360400--Sobic007G063000 Sobic009G256300 Sobic009G256300 Sobic003G360400--Sobic009G256300 Sobic008G083200--Sobic003G379200 Sobic008G083200--Sobic009G044800 Sobic008G083200--Sobic006G174850 Sobic008G083200--Sobic006G261400 Sobic003G428100 Sobic003G428100 Sobic008G083200--Sobic003G428100 Sobic008G083200--Sobic006G127600 Sobic002G117400 Sobic002G117400 Sobic008G083200--Sobic002G117400 Sobic006G118700 Sobic006G118700 Sobic008G083200--Sobic006G118700 Sobic006G131000 Sobic006G131000 Sobic008G083200--Sobic006G131000 Sobic004G265500 Sobic004G265500 Sobic010G000800--Sobic004G265500 Sobic004G322400 Sobic004G322400 Sobic010G000800--Sobic004G322400 Sobic003G163200 Sobic003G163200 Sobic010G000800--Sobic003G163200 Sobic010G000800--Sobic003G379200 Sobic003G189600 Sobic003G189600 Sobic010G000800--Sobic003G189600 Sobic002G179400 Sobic002G179400 Sobic010G000800--Sobic002G179400 Sobic006G077200 Sobic006G077200 Sobic010G000800--Sobic006G077200 Sobic010G000800--Sobic006G261400 Sobic002G429300 Sobic002G429300 Sobic010G000800--Sobic002G429300 Sobic001G354600--Sobic003G360400 Sobic001G354600--Sobic010G112100 Sobic001G354600--Sobic001G433800 Sobic004G048800 Sobic004G048800 Sobic001G354600--Sobic004G048800 Sobic007G105100 Sobic007G105100 Sobic001G354600--Sobic007G105100 Sobic001G354600--Sobic002G133300 Sobic001G063700 Sobic001G063700 Sobic001G354600--Sobic001G063700 Sobic002G068100 Sobic002G068100 Sobic001G354600--Sobic002G068100 Sobic001G354600--Sobic009G044800 Sobic003G363700--Sobic003G379200 Sobic001G237600 Sobic001G237600 Sobic003G363700--Sobic001G237600 Sobic003G363700--Sobic004G265500 Sobic002G371700 Sobic002G371700 Sobic003G363700--Sobic002G371700 Sobic009G228000 Sobic009G228000 Sobic003G363700--Sobic009G228000 Sobic002G374300 Sobic002G374300 Sobic003G363700--Sobic002G374300 Sobic003G043000 Sobic003G043000 Sobic003G363700--Sobic003G043000 Sobic003G363700--Sobic010G000800 Sobic003G182300 Sobic003G182300 Sobic003G363700--Sobic003G182300 Sobic006G174850--Sobic007G218000 Sobic006G174850--Sobic006G131000 Sobic006G174850--Sobic009G044800 Sobic001G273700 Sobic001G273700 Sobic006G174850--Sobic001G273700 Sobic006G174850--Sobic003G379200 Sobic005G062200 Sobic005G062200 Sobic006G174850--Sobic005G062200 Sobic001G263600 Sobic001G263600 Sobic006G174850--Sobic001G263600 Sobic007G132100 Sobic007G132100 Sobic006G174850--Sobic007G132100 Sobic006G240100 Sobic006G240100 Sobic006G174850--Sobic006G240100
Octagon: transcription factors


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