Gene annotation
Transcriptome id Sobic.003G363700.3,Sobic.003G363700.1
Synonym Sb03g040540
Functional annotation OsFBL5 - F-box domain and LRR containing protein, expressed
UniProt C5XQI7
Pfam PF12937
Panther DB PTHR32212
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G67190 : F-box/RNI-like superfamily protein
RAP-DB (Rice) LOC_Os01g64030.1 : OsFBL5 - F-box domain and LRR containing protein, expressed
MaizeGDB (Corn) Zm00025a026763
Brachypodium KQK10697 , KQK10696 , PNT73233 , PNT73232
Barley HORVU3Hr1G084380.1
Wheat TraesCS3B02G404900 , TraesCS3A02G372500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G379200 wound-responsive family protein, putative, expressed -
2 Sobic.001G237600 transcription factor Dp, putative, expressed K04683: transcription factor Dp-1
3 Sobic.004G265500 SET domain protein SDG117, putative, expressed -
4 Sobic.002G371700 signal recognition particle 68 kDa protein, putative, expressed K03107: signal recognition particle subunit SRP68
5 Sobic.009G228000 ubiquitin-conjugating enzyme domain containing protein, expressed K10581: ubiquitin-conjugating enzyme E2 O
6 Sobic.002G374300 FAR1 family protein, expressed K17604: zinc finger SWIM domain-containing protein 3
7 Sobic.003G043000 expressed protein -
8 Sobic.010G000800 PHD-finger domain containing protein, expressed -
9 Sobic.003G182300 zinc finger family protein, putative, expressed K16284: E3 ubiquitin-protein ligase SIS3
10 Sobic.001G035200 ThiF family domain containing protein, putative, expressed K04532: NAE1, amyloid beta precursor protein binding protein 1
11 Sobic.010G059500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12818: DHX8, ATP-dependent RNA helicase DHX8/PRP22
12 Sobic.001G492200 OsFBK11 - F-box domain and kelch repeat containing protein, expressed -
13 Sobic.003G296900 expressed protein -
14 Sobic.008G103300 vacuolar protein sorting-associated protein 26, putative, expressed K18466: vacuolar protein sorting-associated protein 26
15 Sobic.003G132000 proteasome subunit, putative, expressed K12176: COPS2, CSN2, COP9 signalosome complex subunit 2
16 Sobic.001G248100 histone acetyltransferase GCN5, putative, expressed K06062: PCAF, KAT2, histone acetyltransferase
17 Sobic.001G405600 basic helix-loop-helix, putative, expressed K10863: aprataxin
18 Sobic.003G012000 GTPase of unknown function domain containing protein, putative, expressed -
19 Sobic.004G124300 tesmin/TSO1-like CXC domain containing protein, expressed -
20 Sobic.006G270600 PSF1 - Putative GINS complex subunit, expressed K10732: GINS1, GINS complex subunit 1


Gene co-expression network
sample Sobic003G363700 Sobic003G363700 Sobic003G379200 Sobic003G379200 Sobic003G363700--Sobic003G379200 Sobic001G237600 Sobic001G237600 Sobic003G363700--Sobic001G237600 Sobic004G265500 Sobic004G265500 Sobic003G363700--Sobic004G265500 Sobic002G371700 Sobic002G371700 Sobic003G363700--Sobic002G371700 Sobic009G228000 Sobic009G228000 Sobic003G363700--Sobic009G228000 Sobic002G374300 Sobic002G374300 Sobic003G363700--Sobic002G374300 Sobic003G043000 Sobic003G043000 Sobic003G363700--Sobic003G043000 Sobic010G000800 Sobic010G000800 Sobic003G363700--Sobic010G000800 Sobic003G182300 Sobic003G182300 Sobic003G363700--Sobic003G182300 Sobic006G261400 Sobic006G261400 Sobic003G379200--Sobic006G261400 Sobic009G044800 Sobic009G044800 Sobic003G379200--Sobic009G044800 Sobic006G088200 Sobic006G088200 Sobic003G379200--Sobic006G088200 Sobic003G360400 Sobic003G360400 Sobic003G379200--Sobic003G360400 Sobic008G083200 Sobic008G083200 Sobic003G379200--Sobic008G083200 Sobic003G379200--Sobic010G000800 Sobic001G354600 Sobic001G354600 Sobic003G379200--Sobic001G354600 Sobic003G379200--Sobic003G363700 Sobic006G174850 Sobic006G174850 Sobic003G379200--Sobic006G174850 Sobic001G237600--Sobic003G363700 Sobic004G320700 Sobic004G320700 Sobic001G237600--Sobic004G320700 Sobic002G079000 Sobic002G079000 Sobic001G237600--Sobic002G079000 Sobic007G087000 Sobic007G087000 Sobic001G237600--Sobic007G087000 Sobic006G039400 Sobic006G039400 Sobic001G237600--Sobic006G039400 Sobic003G202600 Sobic003G202600 Sobic001G237600--Sobic003G202600 Sobic010G244900 Sobic010G244900 Sobic001G237600--Sobic010G244900 Sobic001G095000 Sobic001G095000 Sobic001G237600--Sobic001G095000 Sobic002G292900 Sobic002G292900 Sobic001G237600--Sobic002G292900 Sobic004G265500--Sobic003G043000 Sobic003G163200 Sobic003G163200 Sobic004G265500--Sobic003G163200 Sobic001G308400 Sobic001G308400 Sobic004G265500--Sobic001G308400 Sobic004G357100 Sobic004G357100 Sobic004G265500--Sobic004G357100 Sobic004G265500--Sobic010G000800 Sobic002G042600 Sobic002G042600 Sobic004G265500--Sobic002G042600 Sobic004G053500 Sobic004G053500 Sobic004G265500--Sobic004G053500 SobicK028600 SobicK028600 Sobic004G265500--SobicK028600 Sobic002G227500 Sobic002G227500 Sobic004G265500--Sobic002G227500 Sobic008G103300 Sobic008G103300 Sobic002G371700--Sobic008G103300 Sobic002G371700--Sobic004G053500 Sobic010G059500 Sobic010G059500 Sobic002G371700--Sobic010G059500 Sobic002G142900 Sobic002G142900 Sobic002G371700--Sobic002G142900 Sobic004G131300 Sobic004G131300 Sobic002G371700--Sobic004G131300 Sobic002G401500 Sobic002G401500 Sobic002G371700--Sobic002G401500 Sobic005G110499 Sobic005G110499 Sobic002G371700--Sobic005G110499 Sobic001G087600 Sobic001G087600 Sobic002G371700--Sobic001G087600 Sobic002G371700--Sobic003G363700 Sobic009G107300 Sobic009G107300 Sobic009G228000--Sobic009G107300 Sobic009G228000--Sobic003G043000 Sobic004G240400 Sobic004G240400 Sobic009G228000--Sobic004G240400 Sobic003G241700 Sobic003G241700 Sobic009G228000--Sobic003G241700 Sobic009G228000--Sobic003G363700 Sobic002G063900 Sobic002G063900 Sobic009G228000--Sobic002G063900 Sobic003G297500 Sobic003G297500 Sobic009G228000--Sobic003G297500 Sobic004G209700 Sobic004G209700 Sobic009G228000--Sobic004G209700 Sobic006G234700 Sobic006G234700 Sobic009G228000--Sobic006G234700 Sobic002G374300--Sobic003G363700 Sobic002G374300--Sobic003G043000 Sobic001G542450 Sobic001G542450 Sobic002G374300--Sobic001G542450 Sobic003G012000 Sobic003G012000 Sobic002G374300--Sobic003G012000 Sobic002G154000 Sobic002G154000 Sobic002G374300--Sobic002G154000 Sobic001G151100 Sobic001G151100 Sobic002G374300--Sobic001G151100 Sobic002G374300--Sobic004G209700 Sobic001G393900 Sobic001G393900 Sobic002G374300--Sobic001G393900 Sobic002G374300--Sobic002G371700 Sobic003G043000--Sobic004G265500 Sobic003G043000--Sobic001G308400 Sobic003G296900 Sobic003G296900 Sobic003G043000--Sobic003G296900 Sobic003G043000--Sobic004G357100 Sobic003G043000--Sobic003G241700 Sobic003G043000--Sobic009G228000 Sobic003G043000--SobicK028600 Sobic003G043000--Sobic003G163200 Sobic003G043000--Sobic002G227500 Sobic010G000800--Sobic004G265500 Sobic004G322400 Sobic004G322400 Sobic010G000800--Sobic004G322400 Sobic010G000800--Sobic003G163200 Sobic010G000800--Sobic003G379200 Sobic003G189600 Sobic003G189600 Sobic010G000800--Sobic003G189600 Sobic002G179400 Sobic002G179400 Sobic010G000800--Sobic002G179400 Sobic006G077200 Sobic006G077200 Sobic010G000800--Sobic006G077200 Sobic010G000800--Sobic006G261400 Sobic002G429300 Sobic002G429300 Sobic010G000800--Sobic002G429300 Sobic010G223400 Sobic010G223400 Sobic003G182300--Sobic010G223400 Sobic003G182300--Sobic003G363700 Sobic001G449900 Sobic001G449900 Sobic003G182300--Sobic001G449900 Sobic001G474400 Sobic001G474400 Sobic003G182300--Sobic001G474400 Sobic003G193500 Sobic003G193500 Sobic003G182300--Sobic003G193500 Sobic010G169900 Sobic010G169900 Sobic003G182300--Sobic010G169900 Sobic001G015400 Sobic001G015400 Sobic003G182300--Sobic001G015400 Sobic007G042900 Sobic007G042900 Sobic003G182300--Sobic007G042900 Sobic003G181700 Sobic003G181700 Sobic003G182300--Sobic003G181700
Octagon: transcription factors


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