Gene annotation
Transcriptome id Sobic.001G035200.1,Sobic.001G035200.2
Synonym Sb01g003290, AXR1
Functional annotation ThiF family domain containing protein, putative, expressed
UniProt A0A1B6QH66 , A0A1B6QH59
Pfam PF00899
Panther DB PTHR10953
NCBI CDD -
KEGG Orthology K04532; NAE1, amyloid beta precursor protein binding protein 1
Gene Ontology GO:0008641; ubiquitin-like modifier activating enzyme activity


Orthologs (automatic annotation)
TAIR AT1G05180 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os03g60550.1 : ThiF family domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a033975 , Zm00025a017429 , Zm00025a016436 , Zm00025a008796
Brachypodium KQK12448 , KQK12446 , KQK12447 , KQK12445
Barley HORVU5Hr1G081370.6 , HORVU5Hr1G081370.7 , HORVU5Hr1G081370.4 , HORVU5Hr1G081370.5 , HORVU5Hr1G081370.2 , HORVU5Hr1G081370.3 , HORVU5Hr1G081370.1 , HORVU5Hr1G081370.8 , HORVU5Hr1G081370.9 , HORVU5Hr1G081370.18 , HORVU5Hr1G081370.19 , HORVU5Hr1G081370.14 , HORVU5Hr1G081370.15 , HORVU5Hr1G081370.16 , HORVU5Hr1G081370.17 , HORVU5Hr1G081370.10 , HORVU5Hr1G081370.11 , HORVU5Hr1G081370.12 , HORVU5Hr1G081370.13
Wheat TraesCS5A02G476800 , TraesCS5D02G324800 , TraesCS5D02G324800 , TraesCS5D02G324800 , TraesCS5D02G324800 , TraesCS5B02G489700 , TraesCS5B02G489700 , TraesCS5D02G490100 , TraesCS5D02G490100 , TraesCS5D02G490100 , TraesCS5D02G490100 , TraesCS5D02G324800 , TraesCS5A02G318500 , TraesCS5B02G319000 , TraesCS5B02G319000 , TraesCS5B02G319000 , TraesCS5B02G319000 , TraesCS5B02G319000 , TraesCS5A02G318500 , TraesCS5A02G318500 , TraesCS5A02G318500
Populus -


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cDNA sequences
Sobic.001G035200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G059500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12818: DHX8, ATP-dependent RNA helicase DHX8/PRP22
2 Sobic.001G145400 threonyl-tRNA synthetase, mitochondrial precursor, putative, expressed K01868: TARS, threonyl-tRNA synthetase
3 Sobic.010G185400 HEAT repeat family protein, putative, expressed K03456: serine/threonine-protein phosphatase 2A regulatory subunit A
4 Sobic.006G077200 ubiquitin interaction motif-containing protein, putative, expressed -
5 Sobic.010G034100 GTP-binding protein GUF1, putative, expressed -
6 Sobic.009G084900 expressed protein -
7 Sobic.001G155400 initiation factor 2 subunit family domain containing protein, expressed K03680: translation initiation factor eIF-2B subunit delta
8 Sobic.002G371700 signal recognition particle 68 kDa protein, putative, expressed K03107: signal recognition particle subunit SRP68
9 Sobic.001G087600 ZOS9-03 - C2H2 zinc finger protein, expressed -
10 Sobic.007G042400 HEAT repeat family protein, putative, expressed -
11 Sobic.007G105900 IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed -
12 Sobic.003G405500 mannosyl-oligosaccharide glucosidase, putative, expressed K01228: mannosyl-oligosaccharide glucosidase
13 Sobic.002G063900 zinc ion binding protein, putative, expressed -
14 Sobic.003G363700 OsFBL5 - F-box domain and LRR containing protein, expressed -
15 Sobic.004G124300 tesmin/TSO1-like CXC domain containing protein, expressed -
16 Sobic.001G405600 basic helix-loop-helix, putative, expressed K10863: aprataxin
17 Sobic.001G020000 metallo-beta-lactamase, putative, expressed K14402: CPSF2, cleavage and polyadenylation specificity factor subunit 2
18 Sobic.008G082500 alanyl-tRNA synthetase, putative, expressed K01872: AARS, alanyl-tRNA synthetase
19 Sobic.003G152400 WD domain containing protein, putative, expressed K17601: WD repeat-containing protein 81
20 Sobic.002G227500 protein transport protein, putative, expressed K14006: protein transport protein SEC23


Gene co-expression network
sample Sobic001G035200 Sobic001G035200 Sobic010G059500 Sobic010G059500 Sobic001G035200--Sobic010G059500 Sobic001G145400 Sobic001G145400 Sobic001G035200--Sobic001G145400 Sobic010G185400 Sobic010G185400 Sobic001G035200--Sobic010G185400 Sobic006G077200 Sobic006G077200 Sobic001G035200--Sobic006G077200 Sobic010G034100 Sobic010G034100 Sobic001G035200--Sobic010G034100 Sobic009G084900 Sobic009G084900 Sobic001G035200--Sobic009G084900 Sobic001G155400 Sobic001G155400 Sobic001G035200--Sobic001G155400 Sobic002G371700 Sobic002G371700 Sobic001G035200--Sobic002G371700 Sobic001G087600 Sobic001G087600 Sobic001G035200--Sobic001G087600 Sobic010G059500--Sobic009G084900 Sobic009G131300 Sobic009G131300 Sobic010G059500--Sobic009G131300 Sobic010G059500--Sobic001G035200 Sobic004G096400 Sobic004G096400 Sobic010G059500--Sobic004G096400 Sobic006G234700 Sobic006G234700 Sobic010G059500--Sobic006G234700 Sobic010G059500--Sobic001G145400 Sobic010G059500--Sobic010G034100 Sobic010G059500--Sobic006G077200 Sobic001G493200 Sobic001G493200 Sobic010G059500--Sobic001G493200 Sobic006G086600 Sobic006G086600 Sobic001G145400--Sobic006G086600 Sobic001G145400--Sobic001G035200 Sobic001G145400--Sobic010G059500 Sobic001G145400--Sobic006G077200 Sobic003G405500 Sobic003G405500 Sobic001G145400--Sobic003G405500 Sobic010G007100 Sobic010G007100 Sobic001G145400--Sobic010G007100 Sobic004G340400 Sobic004G340400 Sobic001G145400--Sobic004G340400 Sobic001G145400--Sobic009G084900 Sobic004G085000 Sobic004G085000 Sobic001G145400--Sobic004G085000 Sobic003G189600 Sobic003G189600 Sobic010G185400--Sobic003G189600 Sobic010G185400--Sobic006G077200 Sobic010G185400--Sobic009G084900 Sobic008G082500 Sobic008G082500 Sobic010G185400--Sobic008G082500 Sobic010G185400--Sobic001G035200 Sobic009G126600 Sobic009G126600 Sobic010G185400--Sobic009G126600 Sobic007G042400 Sobic007G042400 Sobic010G185400--Sobic007G042400 Sobic003G416700 Sobic003G416700 Sobic010G185400--Sobic003G416700 Sobic004G072100 Sobic004G072100 Sobic010G185400--Sobic004G072100 Sobic006G077200--Sobic009G084900 Sobic006G077200--Sobic010G185400 Sobic006G077200--Sobic010G059500 Sobic006G077200--Sobic001G145400 Sobic006G077200--Sobic001G493200 Sobic003G249600 Sobic003G249600 Sobic006G077200--Sobic003G249600 Sobic006G077200--Sobic008G082500 Sobic006G077200--Sobic003G189600 Sobic006G077200--Sobic004G096400 Sobic010G034100--Sobic010G059500 Sobic010G034100--Sobic001G035200 Sobic009G192300 Sobic009G192300 Sobic010G034100--Sobic009G192300 Sobic001G405600 Sobic001G405600 Sobic010G034100--Sobic001G405600 Sobic010G034100--Sobic009G084900 Sobic001G283600 Sobic001G283600 Sobic010G034100--Sobic001G283600 Sobic001G020000 Sobic001G020000 Sobic010G034100--Sobic001G020000 Sobic006G252900 Sobic006G252900 Sobic010G034100--Sobic006G252900 Sobic002G227500 Sobic002G227500 Sobic010G034100--Sobic002G227500 Sobic009G084900--Sobic010G059500 Sobic003G072200 Sobic003G072200 Sobic009G084900--Sobic003G072200 Sobic009G084900--Sobic001G493200 Sobic001G433800 Sobic001G433800 Sobic009G084900--Sobic001G433800 Sobic009G084900--Sobic009G131300 Sobic002G133300 Sobic002G133300 Sobic009G084900--Sobic002G133300 Sobic009G084900--Sobic006G077200 Sobic009G084900--Sobic008G082500 Sobic004G260100 Sobic004G260100 Sobic009G084900--Sobic004G260100 Sobic002G425500 Sobic002G425500 Sobic001G155400--Sobic002G425500 Sobic001G155400--Sobic001G035200 Sobic003G413100 Sobic003G413100 Sobic001G155400--Sobic003G413100 Sobic010G096000 Sobic010G096000 Sobic001G155400--Sobic010G096000 Sobic002G063900 Sobic002G063900 Sobic001G155400--Sobic002G063900 Sobic010G145800 Sobic010G145800 Sobic001G155400--Sobic010G145800 Sobic010G140400 Sobic010G140400 Sobic001G155400--Sobic010G140400 Sobic008G173100 Sobic008G173100 Sobic001G155400--Sobic008G173100 Sobic001G155400--Sobic001G020000 Sobic008G103300 Sobic008G103300 Sobic002G371700--Sobic008G103300 Sobic004G053500 Sobic004G053500 Sobic002G371700--Sobic004G053500 Sobic002G371700--Sobic010G059500 Sobic002G142900 Sobic002G142900 Sobic002G371700--Sobic002G142900 Sobic004G131300 Sobic004G131300 Sobic002G371700--Sobic004G131300 Sobic002G401500 Sobic002G401500 Sobic002G371700--Sobic002G401500 Sobic005G110499 Sobic005G110499 Sobic002G371700--Sobic005G110499 Sobic002G371700--Sobic001G087600 Sobic003G363700 Sobic003G363700 Sobic002G371700--Sobic003G363700 Sobic001G151100 Sobic001G151100 Sobic001G087600--Sobic001G151100 Sobic001G461400 Sobic001G461400 Sobic001G087600--Sobic001G461400 Sobic001G087600--Sobic001G020000 Sobic002G145800 Sobic002G145800 Sobic001G087600--Sobic002G145800 Sobic002G154000 Sobic002G154000 Sobic001G087600--Sobic002G154000 Sobic001G087600--Sobic003G416700 Sobic002G430300 Sobic002G430300 Sobic001G087600--Sobic002G430300 Sobic005G167700 Sobic005G167700 Sobic001G087600--Sobic005G167700 Sobic001G087600--Sobic002G371700
Octagon: transcription factors


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