Gene annotation
Transcriptome id Sobic.002G063900.7,Sobic.002G063900.1,Sobic.002G063900.4,Sobic.002G063900.5,Sobic.002G063900.6
Synonym Sb02g005340
Functional annotation zinc ion binding protein, putative, expressed
UniProt C5XBW8
Pfam -
Panther DB PTHR33977 PTHR33977:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G13970 : zinc ion binding
RAP-DB (Rice) LOC_Os07g12520.1 : zinc ion binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a054485 , Zm00025a016048
Brachypodium KQK07676
Barley HORVU3Hr1G053600.1 , HORVU1Hr1G017220.11 , HORVU1Hr1G017220.7 , HORVU1Hr1G017220.6 , HORVU1Hr1G017220.5 , HORVU1Hr1G017220.4 , HORVU1Hr1G017220.3 , HORVU1Hr1G017220.2 , HORVU1Hr1G017220.1 , HORVU1Hr1G017220.9 , HORVU1Hr1G017220.8
Wheat TraesCS1B02G098200 , TraesCS1D02G081900 , TraesCS1A02G080200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G173100 actin, putative, expressed K11662: ACTR6, actin-related protein 6
2 Sobic.006G116100 RNA recognition motif containing protein, putative, expressed -
3 Sobic.004G357100 expressed protein -
4 Sobic.002G260400 - -
5 Sobic.007G090430 - -
6 Sobic.004G246100 nicalin, putative, expressed K06171: nicastrin
7 Sobic.002G278000 endonuclease/exonuclease/phosphatase family protein, putative, expressed K10772: AP endonuclease 2
8 Sobic.008G149800 histone acetyltransferase HAC5, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
9 Sobic.K028600 expressed protein -
10 Sobic.004G096400 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
11 Sobic.003G416700 homeobox domain containing protein, expressed -
12 Sobic.007G147400 - -
13 Sobic.006G281700 DUF803 domain containing, putative, expressed -
14 Sobic.002G357700 phospholipid-transporting ATPase 2, putative, expressed K01530: phospholipid-translocating ATPase
15 Sobic.006G234700 FGGY family of carbohydrate kinases, putative, expressed -
16 Sobic.001G134300 - K17613: calcineurin-binding protein cabin-1
17 Sobic.002G154000 EDM2, putative, expressed -
18 Sobic.002G083500 OsFBX136 - F-box domain containing protein, expressed -
19 Sobic.009G228000 ubiquitin-conjugating enzyme domain containing protein, expressed K10581: ubiquitin-conjugating enzyme E2 O
20 Sobic.010G077500 protein of unknown function DUF1296 domain containing protein, expressed -


Gene co-expression network
sample Sobic002G063900 Sobic002G063900 Sobic008G173100 Sobic008G173100 Sobic002G063900--Sobic008G173100 Sobic006G116100 Sobic006G116100 Sobic002G063900--Sobic006G116100 Sobic004G357100 Sobic004G357100 Sobic002G063900--Sobic004G357100 Sobic002G260400 Sobic002G260400 Sobic002G063900--Sobic002G260400 Sobic007G090430 Sobic007G090430 Sobic002G063900--Sobic007G090430 Sobic004G246100 Sobic004G246100 Sobic002G063900--Sobic004G246100 Sobic002G278000 Sobic002G278000 Sobic002G063900--Sobic002G278000 Sobic008G149800 Sobic008G149800 Sobic002G063900--Sobic008G149800 SobicK028600 SobicK028600 Sobic002G063900--SobicK028600 Sobic008G173100--Sobic002G260400 Sobic008G173100--Sobic007G090430 Sobic008G173100--Sobic006G116100 Sobic008G173100--Sobic002G063900 Sobic002G264200 Sobic002G264200 Sobic008G173100--Sobic002G264200 Sobic010G236400 Sobic010G236400 Sobic008G173100--Sobic010G236400 Sobic008G153000 Sobic008G153000 Sobic008G173100--Sobic008G153000 Sobic001G311500 Sobic001G311500 Sobic008G173100--Sobic001G311500 Sobic010G245000 Sobic010G245000 Sobic008G173100--Sobic010G245000 Sobic006G116100--Sobic008G153000 Sobic006G116100--Sobic008G149800 Sobic006G116100--Sobic008G173100 Sobic003G160000 Sobic003G160000 Sobic006G116100--Sobic003G160000 Sobic006G116100--Sobic002G063900 Sobic002G357700 Sobic002G357700 Sobic006G116100--Sobic002G357700 Sobic003G241200 Sobic003G241200 Sobic006G116100--Sobic003G241200 Sobic009G119000 Sobic009G119000 Sobic006G116100--Sobic009G119000 Sobic003G416700 Sobic003G416700 Sobic006G116100--Sobic003G416700 Sobic004G357100--SobicK028600 Sobic003G444800 Sobic003G444800 Sobic004G357100--Sobic003G444800 Sobic004G357100--Sobic002G063900 Sobic003G152400 Sobic003G152400 Sobic004G357100--Sobic003G152400 Sobic003G043000 Sobic003G043000 Sobic004G357100--Sobic003G043000 Sobic004G265500 Sobic004G265500 Sobic004G357100--Sobic004G265500 Sobic001G308400 Sobic001G308400 Sobic004G357100--Sobic001G308400 Sobic007G042400 Sobic007G042400 Sobic004G357100--Sobic007G042400 Sobic006G234700 Sobic006G234700 Sobic004G357100--Sobic006G234700 Sobic002G260400--Sobic008G173100 Sobic002G056701 Sobic002G056701 Sobic002G260400--Sobic002G056701 Sobic002G260400--Sobic002G063900 Sobic002G370900 Sobic002G370900 Sobic002G260400--Sobic002G370900 Sobic002G260400--Sobic006G116100 Sobic002G260400--Sobic008G153000 Sobic002G260400--Sobic010G236400 Sobic002G083500 Sobic002G083500 Sobic002G260400--Sobic002G083500 Sobic002G260400--Sobic010G245000 Sobic007G090430--Sobic008G173100 Sobic009G177500 Sobic009G177500 Sobic007G090430--Sobic009G177500 Sobic001G384300 Sobic001G384300 Sobic007G090430--Sobic001G384300 Sobic009G260500 Sobic009G260500 Sobic007G090430--Sobic009G260500 Sobic007G090430--Sobic002G063900 Sobic001G398800 Sobic001G398800 Sobic007G090430--Sobic001G398800 Sobic004G048800 Sobic004G048800 Sobic007G090430--Sobic004G048800 Sobic005G207500 Sobic005G207500 Sobic007G090430--Sobic005G207500 Sobic002G317200 Sobic002G317200 Sobic007G090430--Sobic002G317200 Sobic004G246100--Sobic008G149800 Sobic004G246100--Sobic008G153000 Sobic007G061700 Sobic007G061700 Sobic004G246100--Sobic007G061700 Sobic004G246100--Sobic002G063900 Sobic004G246100--Sobic008G173100 Sobic004G246100--Sobic006G116100 Sobic006G046700 Sobic006G046700 Sobic004G246100--Sobic006G046700 Sobic009G137100 Sobic009G137100 Sobic004G246100--Sobic009G137100 Sobic004G246100--Sobic002G260400 Sobic002G278000--Sobic002G063900 Sobic002G278000--Sobic006G116100 Sobic005G013200 Sobic005G013200 Sobic002G278000--Sobic005G013200 Sobic001G511500 Sobic001G511500 Sobic002G278000--Sobic001G511500 Sobic002G278000--Sobic008G149800 Sobic005G015900 Sobic005G015900 Sobic002G278000--Sobic005G015900 Sobic008G028700 Sobic008G028700 Sobic002G278000--Sobic008G028700 Sobic002G278000--Sobic008G173100 Sobic001G167200 Sobic001G167200 Sobic002G278000--Sobic001G167200 Sobic008G149800--Sobic006G116100 Sobic008G149800--Sobic008G153000 Sobic008G149800--Sobic007G061700 Sobic008G149800--Sobic002G357700 Sobic002G164300 Sobic002G164300 Sobic008G149800--Sobic002G164300 Sobic008G149800--Sobic004G246100 Sobic002G158700 Sobic002G158700 Sobic008G149800--Sobic002G158700 Sobic005G154500 Sobic005G154500 Sobic008G149800--Sobic005G154500 Sobic001G155000 Sobic001G155000 Sobic008G149800--Sobic001G155000 SobicK028600--Sobic003G444800 SobicK028600--Sobic004G357100 SobicK028600--Sobic001G308400 Sobic002G103600 Sobic002G103600 SobicK028600--Sobic002G103600 SobicK028600--Sobic007G042400 SobicK028600--Sobic006G116100 SobicK028600--Sobic003G043000 SobicK028600--Sobic006G234700 SobicK028600--Sobic002G063900
Octagon: transcription factors


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