Gene annotation
Transcriptome id Sobic.001G134300.1
Synonym
Functional annotation -
UniProt A0A1Z5S613
Pfam -
Panther DB PTHR15502 PTHR15502:SF7
NCBI CDD -
KEGG Orthology K17613; calcineurin-binding protein cabin-1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G32820 : Tetratricopeptide repeat (TPR)-like superfamily protein
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a007624
Brachypodium PNT74300 , PNT74297 , PNT74298 , PNT74299
Barley HORVU4Hr1G004230.1 , HORVU4Hr1G004230.3 , HORVU4Hr1G004230.2 , HORVU4Hr1G004230.5 , HORVU4Hr1G004230.7 , HORVU4Hr1G004230.6 , HORVU4Hr1G004230.9 , HORVU4Hr1G004230.8 , HORVU4Hr1G004230.4 , HORVU4Hr1G004230.15 , HORVU4Hr1G004230.14 , HORVU4Hr1G004230.11 , HORVU4Hr1G004230.10 , HORVU4Hr1G004230.13 , HORVU4Hr1G004230.12
Wheat TraesCS4B02G028900 , TraesCS4A02G284200 , TraesCS4D02G026500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G065300 expressed protein K11643: CHD4, chromodomain-helicase-DNA-binding protein 4
2 Sobic.001G306900 tetratricopeptide repeat domain containing protein, expressed K12600: SKI3, superkiller protein 3
3 Sobic.010G001100 chromo domain containing protein, expressed -
4 Sobic.004G156500 expressed protein -
5 Sobic.004G086200 peptidyl-prolyl cis-trans isomerase, putative, expressed K09566: peptidyl-prolyl isomerase G (cyclophilin G)
6 Sobic.001G398800 FHA domain containing protein, putative, expressed -
7 Sobic.001G090800 PHD finger family protein, putative, expressed -
8 Sobic.001G346900 RNA cap guanine-N2 methyltransferase domain containing protein, expressed K14292: trimethylguanosine synthase
9 Sobic.002G153700 SWP, putative, expressed K15156: MED14, mediator of RNA polymerase II transcription subunit 14
10 Sobic.002G063900 zinc ion binding protein, putative, expressed -
11 Sobic.004G048800 - K12599: SKI2, antiviral helicase SKI2
12 Sobic.006G210000 zinc finger domain, LSD1 subclass family protein, expressed -
13 Sobic.005G200800 homeobox domain containing protein, expressed -
14 Sobic.009G119000 tetratricopeptide repeat containing protein, putative, expressed K09527: DnaJ homolog subfamily C member 7
15 Sobic.002G422100 EMB1011, putative, expressed K14317: NUP214, nuclear pore complex protein Nup214
16 Sobic.002G154000 EDM2, putative, expressed -
17 Sobic.003G293200 plus-3 domain containing protein, expressed -
18 Sobic.004G223600 transcription factor-related, putative, expressed K15199: general transcription factor 3C polypeptide 1
19 Sobic.008G100100 MYB family transcription factor, putative, expressed K12860: CDC5L, CDC5, pre-mRNA-splicing factor CDC5/CEF1
20 Sobic.003G416700 homeobox domain containing protein, expressed -


Gene co-expression network
sample Sobic001G134300 Sobic001G134300 Sobic010G065300 Sobic010G065300 Sobic001G134300--Sobic010G065300 Sobic001G306900 Sobic001G306900 Sobic001G134300--Sobic001G306900 Sobic010G001100 Sobic010G001100 Sobic001G134300--Sobic010G001100 Sobic004G156500 Sobic004G156500 Sobic001G134300--Sobic004G156500 Sobic004G086200 Sobic004G086200 Sobic001G134300--Sobic004G086200 Sobic001G398800 Sobic001G398800 Sobic001G134300--Sobic001G398800 Sobic001G090800 Sobic001G090800 Sobic001G134300--Sobic001G090800 Sobic001G346900 Sobic001G346900 Sobic001G134300--Sobic001G346900 Sobic002G153700 Sobic002G153700 Sobic001G134300--Sobic002G153700 Sobic010G065300--Sobic010G001100 Sobic008G009700 Sobic008G009700 Sobic010G065300--Sobic008G009700 Sobic010G065300--Sobic002G153700 Sobic010G065300--Sobic001G306900 Sobic010G065300--Sobic001G134300 Sobic003G293200 Sobic003G293200 Sobic010G065300--Sobic003G293200 Sobic009G119000 Sobic009G119000 Sobic010G065300--Sobic009G119000 Sobic010G065300--Sobic004G156500 Sobic004G048800 Sobic004G048800 Sobic010G065300--Sobic004G048800 Sobic004G138000 Sobic004G138000 Sobic001G306900--Sobic004G138000 Sobic001G306900--Sobic010G065300 Sobic001G303675 Sobic001G303675 Sobic001G306900--Sobic001G303675 Sobic007G065400 Sobic007G065400 Sobic001G306900--Sobic007G065400 Sobic001G511500 Sobic001G511500 Sobic001G306900--Sobic001G511500 Sobic004G145500 Sobic004G145500 Sobic001G306900--Sobic004G145500 Sobic001G306900--Sobic002G153700 Sobic006G013500 Sobic006G013500 Sobic001G306900--Sobic006G013500 Sobic001G094000 Sobic001G094000 Sobic001G306900--Sobic001G094000 Sobic010G001100--Sobic010G065300 Sobic010G001100--Sobic004G048800 Sobic002G396500 Sobic002G396500 Sobic010G001100--Sobic002G396500 Sobic010G001100--Sobic003G293200 Sobic004G242400 Sobic004G242400 Sobic010G001100--Sobic004G242400 Sobic009G109200 Sobic009G109200 Sobic010G001100--Sobic009G109200 Sobic002G154000 Sobic002G154000 Sobic010G001100--Sobic002G154000 Sobic001G352900 Sobic001G352900 Sobic010G001100--Sobic001G352900 Sobic009G256300 Sobic009G256300 Sobic010G001100--Sobic009G256300 Sobic008G100100 Sobic008G100100 Sobic004G156500--Sobic008G100100 Sobic004G156500--Sobic010G065300 Sobic004G156500--Sobic001G134300 Sobic004G156500--Sobic001G306900 Sobic006G118700 Sobic006G118700 Sobic004G156500--Sobic006G118700 Sobic006G210000 Sobic006G210000 Sobic004G156500--Sobic006G210000 Sobic003G416700 Sobic003G416700 Sobic004G156500--Sobic003G416700 Sobic002G357100 Sobic002G357100 Sobic004G156500--Sobic002G357100 Sobic002G259800 Sobic002G259800 Sobic004G156500--Sobic002G259800 Sobic004G086200--Sobic001G346900 Sobic004G285000 Sobic004G285000 Sobic004G086200--Sobic004G285000 Sobic004G086200--Sobic001G134300 Sobic001G245900 Sobic001G245900 Sobic004G086200--Sobic001G245900 Sobic004G086200--Sobic001G306900 Sobic010G096000 Sobic010G096000 Sobic004G086200--Sobic010G096000 Sobic010G279900 Sobic010G279900 Sobic004G086200--Sobic010G279900 Sobic001G246500 Sobic001G246500 Sobic004G086200--Sobic001G246500 Sobic004G086200--Sobic010G065300 Sobic001G398800--Sobic004G048800 Sobic001G026200 Sobic001G026200 Sobic001G398800--Sobic001G026200 Sobic003G360400 Sobic003G360400 Sobic001G398800--Sobic003G360400 Sobic001G398800--Sobic001G134300 Sobic002G071500 Sobic002G071500 Sobic001G398800--Sobic002G071500 Sobic001G398800--Sobic010G001100 Sobic007G090430 Sobic007G090430 Sobic001G398800--Sobic007G090430 Sobic001G398800--Sobic010G065300 Sobic004G039200 Sobic004G039200 Sobic001G398800--Sobic004G039200 Sobic001G090800--Sobic001G134300 Sobic001G090800--Sobic010G065300 Sobic007G044100 Sobic007G044100 Sobic001G090800--Sobic007G044100 Sobic001G090800--Sobic010G001100 Sobic001G090800--Sobic002G153700 Sobic001G090800--Sobic010G279900 Sobic001G090800--Sobic001G306900 Sobic001G090800--Sobic003G293200 Sobic005G163100 Sobic005G163100 Sobic001G090800--Sobic005G163100 Sobic001G346900--Sobic004G086200 Sobic003G409200 Sobic003G409200 Sobic001G346900--Sobic003G409200 Sobic001G346900--Sobic001G134300 Sobic003G042400 Sobic003G042400 Sobic001G346900--Sobic003G042400 Sobic008G147200 Sobic008G147200 Sobic001G346900--Sobic008G147200 Sobic001G346900--Sobic004G285000 Sobic001G346900--Sobic003G416700 Sobic001G346900--Sobic010G096000 Sobic002G422100 Sobic002G422100 Sobic001G346900--Sobic002G422100 Sobic002G153700--Sobic002G071500 Sobic005G207500 Sobic005G207500 Sobic002G153700--Sobic005G207500 Sobic002G153700--Sobic008G009700 Sobic002G153700--Sobic010G065300 Sobic002G153700--Sobic009G119000 Sobic003G307000 Sobic003G307000 Sobic002G153700--Sobic003G307000 Sobic002G264200 Sobic002G264200 Sobic002G153700--Sobic002G264200 Sobic010G069100 Sobic010G069100 Sobic002G153700--Sobic010G069100 Sobic002G153700--Sobic001G306900
Octagon: transcription factors


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