Gene annotation
Transcriptome id Sobic.004G086200.4,Sobic.004G086200.2,Sobic.004G086200.3,Sobic.004G086200.1
Synonym Sb04g007130
Functional annotation peptidyl-prolyl cis-trans isomerase, putative, expressed
UniProt A0A1Z5RLI8 , A0A194YNF7 , A0A194YNE5 , A0A1Z5RLI5
Pfam PF00160
Panther DB PTHR11071 PTHR11071:SF297
NCBI CDD KOG0879; U-snRNP-associated cyclophilin type peptidyl-prolyl cis-trans isomerase
KEGG Orthology K09566; peptidyl-prolyl isomerase G (cyclophilin G)
Gene Ontology GO:0006457; protein folding GO:0003755peptidyl-prolyl cis-trans isomerase activity GO:0000413protein peptidyl-prolyl isomerization


Orthologs (automatic annotation)
TAIR AT3G63400 : Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
RAP-DB (Rice) LOC_Os02g10970.3,LOC_Os02g10970.1 : peptidyl-prolyl cis-trans isomerase, putative, expressed
MaizeGDB (Corn) Zm00025a012355 , Zm00025a034602 , Zm00025a019498
Brachypodium KQJ93945 , KQJ93944
Barley HORVU6Hr1G037500.19 , HORVU6Hr1G037500.18 , HORVU6Hr1G037500.17 , HORVU6Hr1G037500.16 , HORVU6Hr1G037500.15 , HORVU6Hr1G037500.14 , HORVU6Hr1G037500.13 , HORVU6Hr1G037500.12 , HORVU6Hr1G037500.11 , HORVU6Hr1G037500.10 , HORVU6Hr1G037500.31 , HORVU6Hr1G037500.30 , HORVU6Hr1G037500.33 , HORVU6Hr1G037500.32 , HORVU6Hr1G037500.34 , HORVU6Hr1G037500.24 , HORVU6Hr1G037500.25 , HORVU6Hr1G037500.22 , HORVU6Hr1G037500.23 , HORVU6Hr1G037500.20 , HORVU6Hr1G037500.21 , HORVU6Hr1G037500.7 , HORVU6Hr1G037500.6 , HORVU6Hr1G037500.5 , HORVU6Hr1G037500.4 , HORVU6Hr1G037500.3 , HORVU6Hr1G037500.2 , HORVU6Hr1G037500.1 , HORVU6Hr1G037500.9 , HORVU6Hr1G037500.8 , HORVU6Hr1G037500.29 , HORVU6Hr1G037500.26 , HORVU6Hr1G037500.27 , HORVU6Hr1G037500.28
Wheat TraesCS6A02G176900 , TraesCS6A02G176900 , TraesCS6A02G176900 , TraesCS6A02G176900 , TraesCS6A02G176900 , TraesCS6A02G176900 , TraesCS6A02G176900 , TraesCS6A02G176900 , TraesCS6D02G167200 , TraesCS6D02G167200 , TraesCS6D02G167200 , TraesCS6D02G167200 , TraesCS6B02G208900 , TraesCS6B02G208900 , TraesCS6B02G208900 , TraesCS6B02G208900 , TraesCS6B02G208900 , TraesCS6B02G208900 , TraesCS6B02G208900 , TraesCS6B02G208900 , TraesCS6B02G208900 , TraesCS6D02G167200 , TraesCS6D02G167200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G346900 RNA cap guanine-N2 methyltransferase domain containing protein, expressed K14292: trimethylguanosine synthase
2 Sobic.004G285000 MT-A70 domain containing protein, expressed K05925: mRNA m6A methyltransferase catalytic subunit
3 Sobic.001G134300 - K17613: calcineurin-binding protein cabin-1
4 Sobic.001G245900 expressed protein -
5 Sobic.001G306900 tetratricopeptide repeat domain containing protein, expressed K12600: SKI3, superkiller protein 3
6 Sobic.010G096000 OsDegp10 - Putative Deg protease homologue, expressed -
7 Sobic.010G279900 PHD-finger domain containing protein, expressed -
8 Sobic.001G246500 GTPase of unknown function domain containing protein, putative, expressed -
9 Sobic.010G065300 expressed protein K11643: CHD4, chromodomain-helicase-DNA-binding protein 4
10 Sobic.009G151200 expressed protein -
11 Sobic.004G156500 expressed protein -
12 Sobic.003G409200 protein of unknown function, DUF618 domain containing protein, expressed K15559: regulator of Ty1 transposition protein 103
13 Sobic.008G057000 SWIRM domain containing protein, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
14 Sobic.009G119000 tetratricopeptide repeat containing protein, putative, expressed K09527: DnaJ homolog subfamily C member 7
15 Sobic.002G423200 importin subunit alpha-1b, putative, expressed -
16 Sobic.002G259800 hydroxyproline-rich glycoprotein family protein, putative, expressed -
17 Sobic.003G353600 pumilio-family RNA binding protein, putative, expressed K17943: pumilio RNA-binding family
18 Sobic.006G131200 DNA-directed RNA polymerase III subunit RPC1, putative, expressed K03018: RPC1, DNA-directed RNA polymerase III subunit RPC1
19 Sobic.003G416700 homeobox domain containing protein, expressed -
20 Sobic.002G063900 zinc ion binding protein, putative, expressed -


Gene co-expression network
sample Sobic004G086200 Sobic004G086200 Sobic001G346900 Sobic001G346900 Sobic004G086200--Sobic001G346900 Sobic004G285000 Sobic004G285000 Sobic004G086200--Sobic004G285000 Sobic001G134300 Sobic001G134300 Sobic004G086200--Sobic001G134300 Sobic001G245900 Sobic001G245900 Sobic004G086200--Sobic001G245900 Sobic001G306900 Sobic001G306900 Sobic004G086200--Sobic001G306900 Sobic010G096000 Sobic010G096000 Sobic004G086200--Sobic010G096000 Sobic010G279900 Sobic010G279900 Sobic004G086200--Sobic010G279900 Sobic001G246500 Sobic001G246500 Sobic004G086200--Sobic001G246500 Sobic010G065300 Sobic010G065300 Sobic004G086200--Sobic010G065300 Sobic001G346900--Sobic004G086200 Sobic003G409200 Sobic003G409200 Sobic001G346900--Sobic003G409200 Sobic001G346900--Sobic001G134300 Sobic003G042400 Sobic003G042400 Sobic001G346900--Sobic003G042400 Sobic008G147200 Sobic008G147200 Sobic001G346900--Sobic008G147200 Sobic001G346900--Sobic004G285000 Sobic003G416700 Sobic003G416700 Sobic001G346900--Sobic003G416700 Sobic001G346900--Sobic010G096000 Sobic002G422100 Sobic002G422100 Sobic001G346900--Sobic002G422100 Sobic004G285000--Sobic004G086200 Sobic004G111000 Sobic004G111000 Sobic004G285000--Sobic004G111000 Sobic004G285000--Sobic001G346900 Sobic003G427100 Sobic003G427100 Sobic004G285000--Sobic003G427100 Sobic009G151200 Sobic009G151200 Sobic004G285000--Sobic009G151200 Sobic010G215900 Sobic010G215900 Sobic004G285000--Sobic010G215900 Sobic004G285000--Sobic003G409200 Sobic007G044100 Sobic007G044100 Sobic004G285000--Sobic007G044100 Sobic001G013300 Sobic001G013300 Sobic004G285000--Sobic001G013300 Sobic001G134300--Sobic010G065300 Sobic001G134300--Sobic001G306900 Sobic010G001100 Sobic010G001100 Sobic001G134300--Sobic010G001100 Sobic004G156500 Sobic004G156500 Sobic001G134300--Sobic004G156500 Sobic001G134300--Sobic004G086200 Sobic001G398800 Sobic001G398800 Sobic001G134300--Sobic001G398800 Sobic001G090800 Sobic001G090800 Sobic001G134300--Sobic001G090800 Sobic001G134300--Sobic001G346900 Sobic002G153700 Sobic002G153700 Sobic001G134300--Sobic002G153700 Sobic001G245900--Sobic004G086200 Sobic001G367100 Sobic001G367100 Sobic001G245900--Sobic001G367100 Sobic001G245900--Sobic010G279900 Sobic001G245900--Sobic001G346900 Sobic008G057000 Sobic008G057000 Sobic001G245900--Sobic008G057000 Sobic001G245900--Sobic003G409200 Sobic001G245900--Sobic001G134300 Sobic001G088900 Sobic001G088900 Sobic001G245900--Sobic001G088900 Sobic006G138000 Sobic006G138000 Sobic001G245900--Sobic006G138000 Sobic004G138000 Sobic004G138000 Sobic001G306900--Sobic004G138000 Sobic001G306900--Sobic010G065300 Sobic001G303675 Sobic001G303675 Sobic001G306900--Sobic001G303675 Sobic007G065400 Sobic007G065400 Sobic001G306900--Sobic007G065400 Sobic001G511500 Sobic001G511500 Sobic001G306900--Sobic001G511500 Sobic004G145500 Sobic004G145500 Sobic001G306900--Sobic004G145500 Sobic001G306900--Sobic002G153700 Sobic006G013500 Sobic006G013500 Sobic001G306900--Sobic006G013500 Sobic001G094000 Sobic001G094000 Sobic001G306900--Sobic001G094000 Sobic010G096000--Sobic001G246500 Sobic008G100100 Sobic008G100100 Sobic010G096000--Sobic008G100100 Sobic010G096000--Sobic004G086200 Sobic010G096000--Sobic001G306900 Sobic010G096000--Sobic001G346900 Sobic008G173100 Sobic008G173100 Sobic010G096000--Sobic008G173100 Sobic010G096000--Sobic003G416700 Sobic001G155400 Sobic001G155400 Sobic010G096000--Sobic001G155400 Sobic010G096000--Sobic008G147200 Sobic010G279900--Sobic004G156500 Sobic007G183300 Sobic007G183300 Sobic010G279900--Sobic007G183300 Sobic010G279900--Sobic004G086200 Sobic010G279900--Sobic001G367100 Sobic007G027700 Sobic007G027700 Sobic010G279900--Sobic007G027700 Sobic010G279900--Sobic003G409200 Sobic003G253400 Sobic003G253400 Sobic010G279900--Sobic003G253400 Sobic010G279900--Sobic003G416700 Sobic010G279900--Sobic008G100100 Sobic001G246500--Sobic008G173100 Sobic001G246500--Sobic010G096000 Sobic009G074700 Sobic009G074700 Sobic001G246500--Sobic009G074700 Sobic002G259800 Sobic002G259800 Sobic001G246500--Sobic002G259800 Sobic001G246500--Sobic001G306900 Sobic009G195200 Sobic009G195200 Sobic001G246500--Sobic009G195200 Sobic001G246500--Sobic004G086200 Sobic001G246500--Sobic006G013500 Sobic001G246500--Sobic009G151200 Sobic010G065300--Sobic010G001100 Sobic008G009700 Sobic008G009700 Sobic010G065300--Sobic008G009700 Sobic010G065300--Sobic002G153700 Sobic010G065300--Sobic001G306900 Sobic010G065300--Sobic001G134300 Sobic003G293200 Sobic003G293200 Sobic010G065300--Sobic003G293200 Sobic009G119000 Sobic009G119000 Sobic010G065300--Sobic009G119000 Sobic010G065300--Sobic004G156500 Sobic004G048800 Sobic004G048800 Sobic010G065300--Sobic004G048800
Octagon: transcription factors


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