Gene annotation
Transcriptome id Sobic.009G151200.3,Sobic.009G151200.2,Sobic.009G151200.4
Synonym Sb09g021520
Functional annotation expressed protein
UniProt A0A1B6P8M4 , A0A1Z5R2U0
Pfam -
Panther DB PTHR14000 PTHR14000:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G53440 : Homeodomain-like superfamily protein
RAP-DB (Rice) LOC_Os01g40000.1 : expressed protein
MaizeGDB (Corn) Zm00025a036760 , Zm00025a036763 , Zm00025a044782
Brachypodium PNT66166 , KQJ94007 , KQJ94006 , KQJ94008
Barley HORVU7Hr1G082980.2 , HORVU7Hr1G082980.3 , HORVU7Hr1G082980.1
Wheat TraesCS7D02G344500 , TraesCS7A02G336900 , TraesCS7B02G248400
Populus -


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cDNA sequences
Sobic.009G151200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G248500 expressed protein -
2 Sobic.002G259800 hydroxyproline-rich glycoprotein family protein, putative, expressed -
3 Sobic.005G133500 expressed protein -
4 Sobic.004G285000 MT-A70 domain containing protein, expressed K05925: mRNA m6A methyltransferase catalytic subunit
5 Sobic.001G424600 digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed K09480: digalactosyldiacylglycerol synthase
6 Sobic.004G085300 Sel1 repeat domain containing protein, putative, expressed -
7 Sobic.008G100100 MYB family transcription factor, putative, expressed K12860: CDC5L, CDC5, pre-mRNA-splicing factor CDC5/CEF1
8 Sobic.004G086200 peptidyl-prolyl cis-trans isomerase, putative, expressed K09566: peptidyl-prolyl isomerase G (cyclophilin G)
9 Sobic.004G156500 expressed protein -
10 Sobic.002G223300 nucleoporin p58/p45, putative, expressed K14307: NUPL1, nucleoporin p58/p45
11 Sobic.005G015900 dnaJ domain containing protein, expressed -
12 Sobic.005G009200 expressed protein -
13 Sobic.001G246500 GTPase of unknown function domain containing protein, putative, expressed -
14 Sobic.002G357100 SUMO-activating enzyme subunit 2, putative, expressed K10685: UBLE1B, SAE2, ubiquitin-like 1-activating enzyme E1 B
15 Sobic.003G115100 importin subunit alpha, putative, expressed -
16 Sobic.001G306900 tetratricopeptide repeat domain containing protein, expressed K12600: SKI3, superkiller protein 3
17 Sobic.003G114500 zinc knuckle family protein, putative, expressed -
18 Sobic.002G423200 importin subunit alpha-1b, putative, expressed -
19 Sobic.007G026000 ATBET9, putative, expressed -
20 Sobic.004G246100 nicalin, putative, expressed K06171: nicastrin


Gene co-expression network
sample Sobic009G151200 Sobic009G151200 Sobic006G248500 Sobic006G248500 Sobic009G151200--Sobic006G248500 Sobic002G259800 Sobic002G259800 Sobic009G151200--Sobic002G259800 Sobic005G133500 Sobic005G133500 Sobic009G151200--Sobic005G133500 Sobic004G285000 Sobic004G285000 Sobic009G151200--Sobic004G285000 Sobic001G424600 Sobic001G424600 Sobic009G151200--Sobic001G424600 Sobic004G085300 Sobic004G085300 Sobic009G151200--Sobic004G085300 Sobic008G100100 Sobic008G100100 Sobic009G151200--Sobic008G100100 Sobic004G086200 Sobic004G086200 Sobic009G151200--Sobic004G086200 Sobic004G156500 Sobic004G156500 Sobic009G151200--Sobic004G156500 Sobic001G469800 Sobic001G469800 Sobic006G248500--Sobic001G469800 Sobic006G248500--Sobic002G259800 Sobic003G433500 Sobic003G433500 Sobic006G248500--Sobic003G433500 Sobic006G248500--Sobic009G151200 Sobic008G058800 Sobic008G058800 Sobic006G248500--Sobic008G058800 Sobic004G013600 Sobic004G013600 Sobic006G248500--Sobic004G013600 Sobic007G026000 Sobic007G026000 Sobic006G248500--Sobic007G026000 Sobic004G347100 Sobic004G347100 Sobic006G248500--Sobic004G347100 Sobic009G044900 Sobic009G044900 Sobic006G248500--Sobic009G044900 Sobic009G195200 Sobic009G195200 Sobic002G259800--Sobic009G195200 Sobic001G306900 Sobic001G306900 Sobic002G259800--Sobic001G306900 Sobic005G015900 Sobic005G015900 Sobic002G259800--Sobic005G015900 Sobic003G394300 Sobic003G394300 Sobic002G259800--Sobic003G394300 Sobic002G259800--Sobic006G248500 Sobic001G246500 Sobic001G246500 Sobic002G259800--Sobic001G246500 Sobic005G084100 Sobic005G084100 Sobic002G259800--Sobic005G084100 Sobic002G423200 Sobic002G423200 Sobic002G259800--Sobic002G423200 Sobic002G259800--Sobic004G156500 Sobic005G133500--Sobic009G151200 Sobic005G133500--Sobic002G423200 Sobic003G267800 Sobic003G267800 Sobic005G133500--Sobic003G267800 Sobic005G133500--Sobic002G259800 Sobic006G217200 Sobic006G217200 Sobic005G133500--Sobic006G217200 Sobic008G131000 Sobic008G131000 Sobic005G133500--Sobic008G131000 Sobic004G246100 Sobic004G246100 Sobic005G133500--Sobic004G246100 Sobic010G236400 Sobic010G236400 Sobic005G133500--Sobic010G236400 Sobic001G080900 Sobic001G080900 Sobic005G133500--Sobic001G080900 Sobic004G285000--Sobic004G086200 Sobic004G111000 Sobic004G111000 Sobic004G285000--Sobic004G111000 Sobic001G346900 Sobic001G346900 Sobic004G285000--Sobic001G346900 Sobic003G427100 Sobic003G427100 Sobic004G285000--Sobic003G427100 Sobic004G285000--Sobic009G151200 Sobic010G215900 Sobic010G215900 Sobic004G285000--Sobic010G215900 Sobic003G409200 Sobic003G409200 Sobic004G285000--Sobic003G409200 Sobic007G044100 Sobic007G044100 Sobic004G285000--Sobic007G044100 Sobic001G013300 Sobic001G013300 Sobic004G285000--Sobic001G013300 Sobic004G049700 Sobic004G049700 Sobic001G424600--Sobic004G049700 Sobic001G424600--Sobic009G151200 Sobic002G063900 Sobic002G063900 Sobic001G424600--Sobic002G063900 Sobic006G116100 Sobic006G116100 Sobic001G424600--Sobic006G116100 Sobic001G424600--Sobic002G423200 Sobic002G278000 Sobic002G278000 Sobic001G424600--Sobic002G278000 Sobic003G160000 Sobic003G160000 Sobic001G424600--Sobic003G160000 Sobic001G424600--Sobic008G058800 Sobic002G357700 Sobic002G357700 Sobic001G424600--Sobic002G357700 Sobic004G085300--Sobic009G151200 Sobic002G223300 Sobic002G223300 Sobic004G085300--Sobic002G223300 Sobic001G522400 Sobic001G522400 Sobic004G085300--Sobic001G522400 Sobic002G268900 Sobic002G268900 Sobic004G085300--Sobic002G268900 Sobic004G085300--Sobic004G086200 Sobic002G421700 Sobic002G421700 Sobic004G085300--Sobic002G421700 Sobic004G085300--Sobic002G259800 Sobic004G085300--Sobic004G285000 Sobic006G210200 Sobic006G210200 Sobic004G085300--Sobic006G210200 Sobic008G100100--Sobic004G156500 Sobic008G100100--Sobic001G306900 Sobic006G032400 Sobic006G032400 Sobic008G100100--Sobic006G032400 Sobic008G100100--Sobic005G015900 Sobic006G210000 Sobic006G210000 Sobic008G100100--Sobic006G210000 Sobic007G031600 Sobic007G031600 Sobic008G100100--Sobic007G031600 Sobic010G065300 Sobic010G065300 Sobic008G100100--Sobic010G065300 Sobic003G241200 Sobic003G241200 Sobic008G100100--Sobic003G241200 Sobic010G096000 Sobic010G096000 Sobic008G100100--Sobic010G096000 Sobic004G086200--Sobic001G346900 Sobic004G086200--Sobic004G285000 Sobic001G134300 Sobic001G134300 Sobic004G086200--Sobic001G134300 Sobic001G245900 Sobic001G245900 Sobic004G086200--Sobic001G245900 Sobic004G086200--Sobic001G306900 Sobic004G086200--Sobic010G096000 Sobic010G279900 Sobic010G279900 Sobic004G086200--Sobic010G279900 Sobic004G086200--Sobic001G246500 Sobic004G086200--Sobic010G065300 Sobic004G156500--Sobic008G100100 Sobic004G156500--Sobic010G065300 Sobic004G156500--Sobic001G134300 Sobic004G156500--Sobic001G306900 Sobic006G118700 Sobic006G118700 Sobic004G156500--Sobic006G118700 Sobic004G156500--Sobic006G210000 Sobic003G416700 Sobic003G416700 Sobic004G156500--Sobic003G416700 Sobic002G357100 Sobic002G357100 Sobic004G156500--Sobic002G357100 Sobic004G156500--Sobic002G259800
Octagon: transcription factors


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