Gene annotation
Transcriptome id Sobic.001G424600.1,Sobic.001G424600.2,Sobic.001G424600.3
Synonym Sb01g039910, DGD2
Functional annotation digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed
UniProt A0A1Z5SA90 , C5WQ30
Pfam PF00534
Panther DB PTHR12526 PTHR12526:SF344
NCBI CDD -
KEGG Orthology K09480; digalactosyldiacylglycerol synthase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G00550 : digalactosyl diacylglycerol deficient 2
RAP-DB (Rice) LOC_Os03g16140.2,LOC_Os03g16140.1,LOC_Os03g16140.3 : digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a001780
Brachypodium KQK22393 , KQK22392
Barley HORVU4Hr1G060440.2 , HORVU4Hr1G060440.1 , HORVU4Hr1G060440.3
Wheat TraesCS4A02G093900 , TraesCS4B02G210400 , TraesCS4D02G211200
Populus -


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cDNA sequences
Sobic.001G424600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G049700 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
2 Sobic.009G151200 expressed protein -
3 Sobic.002G063900 zinc ion binding protein, putative, expressed -
4 Sobic.006G116100 RNA recognition motif containing protein, putative, expressed -
5 Sobic.002G423200 importin subunit alpha-1b, putative, expressed -
6 Sobic.002G278000 endonuclease/exonuclease/phosphatase family protein, putative, expressed K10772: AP endonuclease 2
7 Sobic.003G160000 SUMO protease, putative, expressed K08592: sentrin-specific protease 1
8 Sobic.008G058800 OsFBX369 - F-box domain containing protein, expressed -
9 Sobic.002G357700 phospholipid-transporting ATPase 2, putative, expressed K01530: phospholipid-translocating ATPase
10 Sobic.006G281700 DUF803 domain containing, putative, expressed -
11 Sobic.005G154500 OsFBX407 - F-box domain containing protein, expressed -
12 Sobic.005G114400 TBC domain containing protein, expressed -
13 Sobic.009G129600 ABTB1 - Armadillo repeats with a Bric-a-Brac, Tramtrack, Broad Complex BTB domain, expressed -
14 Sobic.002G259800 hydroxyproline-rich glycoprotein family protein, putative, expressed -
15 Sobic.004G085300 Sel1 repeat domain containing protein, putative, expressed -
16 Sobic.008G149800 histone acetyltransferase HAC5, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
17 Sobic.003G241200 nucampholin, putative, expressed K13100: pre-mRNA-splicing factor CWC22
18 Sobic.006G248500 expressed protein -
19 Sobic.005G015900 dnaJ domain containing protein, expressed -
20 Sobic.004G086200 peptidyl-prolyl cis-trans isomerase, putative, expressed K09566: peptidyl-prolyl isomerase G (cyclophilin G)


Gene co-expression network
sample Sobic001G424600 Sobic001G424600 Sobic004G049700 Sobic004G049700 Sobic001G424600--Sobic004G049700 Sobic009G151200 Sobic009G151200 Sobic001G424600--Sobic009G151200 Sobic002G063900 Sobic002G063900 Sobic001G424600--Sobic002G063900 Sobic006G116100 Sobic006G116100 Sobic001G424600--Sobic006G116100 Sobic002G423200 Sobic002G423200 Sobic001G424600--Sobic002G423200 Sobic002G278000 Sobic002G278000 Sobic001G424600--Sobic002G278000 Sobic003G160000 Sobic003G160000 Sobic001G424600--Sobic003G160000 Sobic008G058800 Sobic008G058800 Sobic001G424600--Sobic008G058800 Sobic002G357700 Sobic002G357700 Sobic001G424600--Sobic002G357700 Sobic004G049700--Sobic001G424600 Sobic004G049700--Sobic002G063900 Sobic002G148400 Sobic002G148400 Sobic004G049700--Sobic002G148400 Sobic006G039800 Sobic006G039800 Sobic004G049700--Sobic006G039800 Sobic002G154000 Sobic002G154000 Sobic004G049700--Sobic002G154000 Sobic006G161000 Sobic006G161000 Sobic004G049700--Sobic006G161000 Sobic001G346900 Sobic001G346900 Sobic004G049700--Sobic001G346900 Sobic001G461400 Sobic001G461400 Sobic004G049700--Sobic001G461400 Sobic007G004000 Sobic007G004000 Sobic004G049700--Sobic007G004000 Sobic006G248500 Sobic006G248500 Sobic009G151200--Sobic006G248500 Sobic002G259800 Sobic002G259800 Sobic009G151200--Sobic002G259800 Sobic005G133500 Sobic005G133500 Sobic009G151200--Sobic005G133500 Sobic004G285000 Sobic004G285000 Sobic009G151200--Sobic004G285000 Sobic009G151200--Sobic001G424600 Sobic004G085300 Sobic004G085300 Sobic009G151200--Sobic004G085300 Sobic008G100100 Sobic008G100100 Sobic009G151200--Sobic008G100100 Sobic004G086200 Sobic004G086200 Sobic009G151200--Sobic004G086200 Sobic004G156500 Sobic004G156500 Sobic009G151200--Sobic004G156500 Sobic008G173100 Sobic008G173100 Sobic002G063900--Sobic008G173100 Sobic002G063900--Sobic006G116100 Sobic004G357100 Sobic004G357100 Sobic002G063900--Sobic004G357100 Sobic002G260400 Sobic002G260400 Sobic002G063900--Sobic002G260400 Sobic007G090430 Sobic007G090430 Sobic002G063900--Sobic007G090430 Sobic004G246100 Sobic004G246100 Sobic002G063900--Sobic004G246100 Sobic002G063900--Sobic002G278000 Sobic008G149800 Sobic008G149800 Sobic002G063900--Sobic008G149800 SobicK028600 SobicK028600 Sobic002G063900--SobicK028600 Sobic008G153000 Sobic008G153000 Sobic006G116100--Sobic008G153000 Sobic006G116100--Sobic008G149800 Sobic006G116100--Sobic008G173100 Sobic006G116100--Sobic003G160000 Sobic006G116100--Sobic002G063900 Sobic006G116100--Sobic002G357700 Sobic003G241200 Sobic003G241200 Sobic006G116100--Sobic003G241200 Sobic009G119000 Sobic009G119000 Sobic006G116100--Sobic009G119000 Sobic003G416700 Sobic003G416700 Sobic006G116100--Sobic003G416700 Sobic002G423200--Sobic002G259800 Sobic002G423200--Sobic005G133500 Sobic002G423200--Sobic004G246100 Sobic002G423200--Sobic006G248500 Sobic008G127400 Sobic008G127400 Sobic002G423200--Sobic008G127400 Sobic010G236400 Sobic010G236400 Sobic002G423200--Sobic010G236400 Sobic003G353600 Sobic003G353600 Sobic002G423200--Sobic003G353600 Sobic001G138400 Sobic001G138400 Sobic002G423200--Sobic001G138400 Sobic006G138000 Sobic006G138000 Sobic002G423200--Sobic006G138000 Sobic002G278000--Sobic002G063900 Sobic002G278000--Sobic006G116100 Sobic005G013200 Sobic005G013200 Sobic002G278000--Sobic005G013200 Sobic001G511500 Sobic001G511500 Sobic002G278000--Sobic001G511500 Sobic002G278000--Sobic008G149800 Sobic005G015900 Sobic005G015900 Sobic002G278000--Sobic005G015900 Sobic008G028700 Sobic008G028700 Sobic002G278000--Sobic008G028700 Sobic002G278000--Sobic008G173100 Sobic001G167200 Sobic001G167200 Sobic002G278000--Sobic001G167200 Sobic003G160000--Sobic006G116100 Sobic003G160000--Sobic010G236400 Sobic003G160000--Sobic003G241200 Sobic003G160000--Sobic008G153000 Sobic010G204400 Sobic010G204400 Sobic003G160000--Sobic010G204400 Sobic007G026000 Sobic007G026000 Sobic003G160000--Sobic007G026000 Sobic004G084700 Sobic004G084700 Sobic003G160000--Sobic004G084700 Sobic001G452000 Sobic001G452000 Sobic003G160000--Sobic001G452000 Sobic006G032400 Sobic006G032400 Sobic003G160000--Sobic006G032400 Sobic001G042200 Sobic001G042200 Sobic008G058800--Sobic001G042200 Sobic009G129600 Sobic009G129600 Sobic008G058800--Sobic009G129600 Sobic008G058800--Sobic006G248500 Sobic003G205501 Sobic003G205501 Sobic008G058800--Sobic003G205501 Sobic010G077500 Sobic010G077500 Sobic008G058800--Sobic010G077500 Sobic002G264200 Sobic002G264200 Sobic008G058800--Sobic002G264200 Sobic008G058800--Sobic007G026000 Sobic008G058800--Sobic008G127400 Sobic004G180900 Sobic004G180900 Sobic008G058800--Sobic004G180900 Sobic002G357700--Sobic008G149800 Sobic002G357700--Sobic006G116100 Sobic005G154500 Sobic005G154500 Sobic002G357700--Sobic005G154500 Sobic002G164300 Sobic002G164300 Sobic002G357700--Sobic002G164300 Sobic002G357700--Sobic005G013200 Sobic002G357700--Sobic002G063900 Sobic006G186400 Sobic006G186400 Sobic002G357700--Sobic006G186400 Sobic002G357700--Sobic008G153000 Sobic009G126600 Sobic009G126600 Sobic002G357700--Sobic009G126600
Octagon: transcription factors


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