Gene annotation
Transcriptome id Sobic.005G114400.2,Sobic.005G114400.1
Synonym Sb05g015560
Functional annotation TBC domain containing protein, expressed
UniProt A0A1Z5RIE1 , C5Y2A9
Pfam PF00566
Panther DB PTHR22957 PTHR22957:SF302
NCBI CDD KOG4567; GTPase-activating protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G04830 : Ypt/Rab-GAP domain of gyp1p superfamily protein
RAP-DB (Rice) LOC_Os11g28990.1 : TBC domain containing protein, expressed
MaizeGDB (Corn) Zm00025a029753
Brachypodium -
Barley HORVU7Hr1G092080.6 , HORVU7Hr1G092080.7 , HORVU7Hr1G092080.4 , HORVU7Hr1G092080.1 , HORVU7Hr1G092080.5 , HORVU7Hr1G092080.2 , HORVU7Hr1G092080.8 , HORVU7Hr1G092080.9 , HORVU7Hr1G092080.14 , HORVU7Hr1G092080.10 , HORVU7Hr1G092080.11 , HORVU7Hr1G092080.12 , HORVU7Hr1G092080.13
Wheat TraesCS7D02G385100 , TraesCS7D02G385100 , TraesCS7D02G385100 , TraesCS7B02G291000 , TraesCS7A02G389100 , TraesCS7A02G389100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G220700 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
2 Sobic.007G000800 expressed protein -
3 Sobic.002G259800 hydroxyproline-rich glycoprotein family protein, putative, expressed -
4 Sobic.001G246500 GTPase of unknown function domain containing protein, putative, expressed -
5 Sobic.009G151200 expressed protein -
6 Sobic.002G389800 expressed protein K14440: SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
7 Sobic.006G091000 hydrolase, alpha/beta fold family domain containing protein, expressed K13617: protein phosphatase methylesterase 1
8 Sobic.001G424600 digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed K09480: digalactosyldiacylglycerol synthase
9 Sobic.004G345700 TBC domain containing protein, expressed -
10 Sobic.010G096000 OsDegp10 - Putative Deg protease homologue, expressed -
11 Sobic.007G056700 AP2/EREBP transcription factor BABY BOOM, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
12 Sobic.009G030300 RNA polymerase II-associated protein 3, putative, expressed -
13 Sobic.010G245000 DTW domain containing protein, putative, expressed -
14 Sobic.001G226000 WD domain, G-beta repeat domain containing protein, expressed K10599: PRPF19, pre-mRNA-processing factor 19
15 Sobic.009G195200 ESP1, putative, expressed -
16 Sobic.005G154500 OsFBX407 - F-box domain containing protein, expressed -
17 Sobic.003G401100 WW domain containing protein, expressed K12865: PQBP1, polyglutamine-binding protein 1
18 Sobic.008G173100 actin, putative, expressed K11662: ACTR6, actin-related protein 6
19 Sobic.010G204400 phox domain-containing protein, putative, expressed -
20 Sobic.004G345400 WD domain, G-beta repeat domain containing protein, expressed K05757: actin related protein 2/3 complex, subunit 1A/1B


Gene co-expression network
sample Sobic005G114400 Sobic005G114400 Sobic003G220700 Sobic003G220700 Sobic005G114400--Sobic003G220700 Sobic007G000800 Sobic007G000800 Sobic005G114400--Sobic007G000800 Sobic002G259800 Sobic002G259800 Sobic005G114400--Sobic002G259800 Sobic001G246500 Sobic001G246500 Sobic005G114400--Sobic001G246500 Sobic009G151200 Sobic009G151200 Sobic005G114400--Sobic009G151200 Sobic002G389800 Sobic002G389800 Sobic005G114400--Sobic002G389800 Sobic006G091000 Sobic006G091000 Sobic005G114400--Sobic006G091000 Sobic001G424600 Sobic001G424600 Sobic005G114400--Sobic001G424600 Sobic004G345700 Sobic004G345700 Sobic005G114400--Sobic004G345700 Sobic003G220700--Sobic005G114400 Sobic007G071200 Sobic007G071200 Sobic003G220700--Sobic007G071200 Sobic001G226000 Sobic001G226000 Sobic003G220700--Sobic001G226000 Sobic004G129300 Sobic004G129300 Sobic003G220700--Sobic004G129300 Sobic007G191700 Sobic007G191700 Sobic003G220700--Sobic007G191700 Sobic010G279700 Sobic010G279700 Sobic003G220700--Sobic010G279700 Sobic002G268400 Sobic002G268400 Sobic003G220700--Sobic002G268400 Sobic006G252100 Sobic006G252100 Sobic003G220700--Sobic006G252100 Sobic002G357100 Sobic002G357100 Sobic003G220700--Sobic002G357100 Sobic002G158700 Sobic002G158700 Sobic007G000800--Sobic002G158700 Sobic003G401100 Sobic003G401100 Sobic007G000800--Sobic003G401100 Sobic008G149800 Sobic008G149800 Sobic007G000800--Sobic008G149800 Sobic010G245000 Sobic010G245000 Sobic007G000800--Sobic010G245000 Sobic007G000800--Sobic002G259800 Sobic001G167200 Sobic001G167200 Sobic007G000800--Sobic001G167200 Sobic007G000800--Sobic004G345700 Sobic008G083000 Sobic008G083000 Sobic007G000800--Sobic008G083000 Sobic008G173100 Sobic008G173100 Sobic007G000800--Sobic008G173100 Sobic009G195200 Sobic009G195200 Sobic002G259800--Sobic009G195200 Sobic001G306900 Sobic001G306900 Sobic002G259800--Sobic001G306900 Sobic005G015900 Sobic005G015900 Sobic002G259800--Sobic005G015900 Sobic003G394300 Sobic003G394300 Sobic002G259800--Sobic003G394300 Sobic006G248500 Sobic006G248500 Sobic002G259800--Sobic006G248500 Sobic002G259800--Sobic001G246500 Sobic005G084100 Sobic005G084100 Sobic002G259800--Sobic005G084100 Sobic002G423200 Sobic002G423200 Sobic002G259800--Sobic002G423200 Sobic004G156500 Sobic004G156500 Sobic002G259800--Sobic004G156500 Sobic001G246500--Sobic008G173100 Sobic010G096000 Sobic010G096000 Sobic001G246500--Sobic010G096000 Sobic009G074700 Sobic009G074700 Sobic001G246500--Sobic009G074700 Sobic001G246500--Sobic002G259800 Sobic001G246500--Sobic001G306900 Sobic001G246500--Sobic009G195200 Sobic004G086200 Sobic004G086200 Sobic001G246500--Sobic004G086200 Sobic006G013500 Sobic006G013500 Sobic001G246500--Sobic006G013500 Sobic001G246500--Sobic009G151200 Sobic009G151200--Sobic006G248500 Sobic009G151200--Sobic002G259800 Sobic005G133500 Sobic005G133500 Sobic009G151200--Sobic005G133500 Sobic004G285000 Sobic004G285000 Sobic009G151200--Sobic004G285000 Sobic009G151200--Sobic001G424600 Sobic004G085300 Sobic004G085300 Sobic009G151200--Sobic004G085300 Sobic008G100100 Sobic008G100100 Sobic009G151200--Sobic008G100100 Sobic009G151200--Sobic004G086200 Sobic009G151200--Sobic004G156500 Sobic002G389800--Sobic005G114400 Sobic003G289400 Sobic003G289400 Sobic002G389800--Sobic003G289400 Sobic002G389800--Sobic006G013500 Sobic002G389800--Sobic009G074700 Sobic007G026000 Sobic007G026000 Sobic002G389800--Sobic007G026000 Sobic007G146900 Sobic007G146900 Sobic002G389800--Sobic007G146900 Sobic010G202600 Sobic010G202600 Sobic002G389800--Sobic010G202600 Sobic006G276000 Sobic006G276000 Sobic002G389800--Sobic006G276000 Sobic002G389800--Sobic010G245000 Sobic009G040800 Sobic009G040800 Sobic006G091000--Sobic009G040800 Sobic005G178950 Sobic005G178950 Sobic006G091000--Sobic005G178950 Sobic004G353400 Sobic004G353400 Sobic006G091000--Sobic004G353400 Sobic005G040900 Sobic005G040900 Sobic006G091000--Sobic005G040900 Sobic004G347100 Sobic004G347100 Sobic006G091000--Sobic004G347100 Sobic010G074900 Sobic010G074900 Sobic006G091000--Sobic010G074900 Sobic007G139400 Sobic007G139400 Sobic006G091000--Sobic007G139400 Sobic010G172400 Sobic010G172400 Sobic006G091000--Sobic010G172400 Sobic006G091000--Sobic005G114400 Sobic004G049700 Sobic004G049700 Sobic001G424600--Sobic004G049700 Sobic001G424600--Sobic009G151200 Sobic002G063900 Sobic002G063900 Sobic001G424600--Sobic002G063900 Sobic006G116100 Sobic006G116100 Sobic001G424600--Sobic006G116100 Sobic001G424600--Sobic002G423200 Sobic002G278000 Sobic002G278000 Sobic001G424600--Sobic002G278000 Sobic003G160000 Sobic003G160000 Sobic001G424600--Sobic003G160000 Sobic008G058800 Sobic008G058800 Sobic001G424600--Sobic008G058800 Sobic002G357700 Sobic002G357700 Sobic001G424600--Sobic002G357700 Sobic002G197100 Sobic002G197100 Sobic004G345700--Sobic002G197100 Sobic001G514000 Sobic001G514000 Sobic004G345700--Sobic001G514000 Sobic004G007300 Sobic004G007300 Sobic004G345700--Sobic004G007300 Sobic001G408700 Sobic001G408700 Sobic004G345700--Sobic001G408700 Sobic005G154500 Sobic005G154500 Sobic004G345700--Sobic005G154500 Sobic001G176200 Sobic001G176200 Sobic004G345700--Sobic001G176200 Sobic006G092800 Sobic006G092800 Sobic004G345700--Sobic006G092800 Sobic003G205501 Sobic003G205501 Sobic004G345700--Sobic003G205501 Sobic004G345700--Sobic010G245000
Octagon: transcription factors


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