Gene annotation
Transcriptome id Sobic.010G204400.1
Synonym Sb10g025180
Functional annotation phox domain-containing protein, putative, expressed
UniProt C5Z6N5
Pfam PF00787
Panther DB PTHR10555 PTHR10555:SF154
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G32160 : Phox (PX) domain-containing protein
RAP-DB (Rice) LOC_Os06g43560.1 : phox domain-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a051411 , Zm00025a042075
Brachypodium KQK16756 , KQK16755 , PNT75336
Barley HORVU0Hr1G022510.12 , HORVU0Hr1G022510.10 , HORVU0Hr1G022510.11 , HORVU0Hr1G022510.4 , HORVU0Hr1G022510.5 , HORVU0Hr1G022510.6 , HORVU0Hr1G022510.7 , HORVU0Hr1G022510.1 , HORVU0Hr1G022510.2 , HORVU0Hr1G022510.8 , HORVU0Hr1G022510.9
Wheat TraesCS7A02G521300 , TraesCS7A02G521300 , TraesCS7B02G438100 , TraesCS7B02G438100 , TraesCS7D02G510800 , TraesCS7D02G510800
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.010G204400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G163800 diacylglycerol kinase, putative, expressed -
2 Sobic.006G195700 WD domain, G-beta repeat domain containing protein, expressed K14962: WDR82, SWD2, COMPASS component SWD2
3 Sobic.007G218000 chloride transporter, chloride channel family, putative, expressed -
4 Sobic.008G153000 MATH domain containing protein, expressed -
5 Sobic.010G236400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K12847: USP39, U4/U6.U5 tri-snRNP-associated protein 2
6 Sobic.007G132100 myrosinase precursor, putative, expressed -
7 Sobic.003G416700 homeobox domain containing protein, expressed -
8 Sobic.006G131000 expressed protein K11968: ariadne-1
9 Sobic.010G116600 FHA domain containing protein, putative, expressed -
10 Sobic.004G072100 centromere/kinetochore protein zw10, putative, expressed K11578: ZW10, protein transport protein DSL1/ZW10
11 Sobic.007G119200 intracellular protein transport protein USO1-related, putative, expressed -
12 Sobic.006G240100 BRCA1-associated protein, putative, expressed K10632: BRCA1-associated protein
13 Sobic.006G116100 RNA recognition motif containing protein, putative, expressed -
14 Sobic.001G155000 DNA-directed RNA polymerase II subunit RPB2, putative, expressed K03010: RPB2, DNA-directed RNA polymerase II subunit RPB2
15 Sobic.003G187500 ATP-binding region, ATPase-like domain containing protein, expressed -
16 Sobic.003G187200 phox domain-containing protein, putative, expressed -
17 Sobic.010G275500 EF hand family protein, putative, expressed -
18 Sobic.007G183900 ubiquitin family protein, putative, expressed -
19 Sobic.009G119000 tetratricopeptide repeat containing protein, putative, expressed K09527: DnaJ homolog subfamily C member 7
20 Sobic.003G401100 WW domain containing protein, expressed K12865: PQBP1, polyglutamine-binding protein 1


Gene co-expression network
sample Sobic010G204400 Sobic010G204400 Sobic006G163800 Sobic006G163800 Sobic010G204400--Sobic006G163800 Sobic006G195700 Sobic006G195700 Sobic010G204400--Sobic006G195700 Sobic007G218000 Sobic007G218000 Sobic010G204400--Sobic007G218000 Sobic008G153000 Sobic008G153000 Sobic010G204400--Sobic008G153000 Sobic010G236400 Sobic010G236400 Sobic010G204400--Sobic010G236400 Sobic007G132100 Sobic007G132100 Sobic010G204400--Sobic007G132100 Sobic003G416700 Sobic003G416700 Sobic010G204400--Sobic003G416700 Sobic006G131000 Sobic006G131000 Sobic010G204400--Sobic006G131000 Sobic010G116600 Sobic010G116600 Sobic010G204400--Sobic010G116600 Sobic006G163800--Sobic010G204400 Sobic001G369000 Sobic001G369000 Sobic006G163800--Sobic001G369000 Sobic006G163800--Sobic006G131000 Sobic010G053800 Sobic010G053800 Sobic006G163800--Sobic010G053800 Sobic006G163800--Sobic007G218000 Sobic010G275500 Sobic010G275500 Sobic006G163800--Sobic010G275500 Sobic006G012500 Sobic006G012500 Sobic006G163800--Sobic006G012500 Sobic004G039600 Sobic004G039600 Sobic006G163800--Sobic004G039600 Sobic004G146500 Sobic004G146500 Sobic006G163800--Sobic004G146500 Sobic006G195700--Sobic010G204400 Sobic009G245800 Sobic009G245800 Sobic006G195700--Sobic009G245800 Sobic006G195700--Sobic010G236400 Sobic002G056701 Sobic002G056701 Sobic006G195700--Sobic002G056701 Sobic002G310200 Sobic002G310200 Sobic006G195700--Sobic002G310200 Sobic002G260400 Sobic002G260400 Sobic006G195700--Sobic002G260400 Sobic010G245000 Sobic010G245000 Sobic006G195700--Sobic010G245000 Sobic006G173100 Sobic006G173100 Sobic006G195700--Sobic006G173100 Sobic003G187500 Sobic003G187500 Sobic006G195700--Sobic003G187500 Sobic007G218000--Sobic007G132100 Sobic004G072100 Sobic004G072100 Sobic007G218000--Sobic004G072100 Sobic002G112700 Sobic002G112700 Sobic007G218000--Sobic002G112700 Sobic007G218000--Sobic006G131000 Sobic009G044800 Sobic009G044800 Sobic007G218000--Sobic009G044800 Sobic007G218000--Sobic010G204400 Sobic007G218000--Sobic006G012500 Sobic009G249700 Sobic009G249700 Sobic007G218000--Sobic009G249700 Sobic009G092400 Sobic009G092400 Sobic007G218000--Sobic009G092400 Sobic006G116100 Sobic006G116100 Sobic008G153000--Sobic006G116100 Sobic006G046700 Sobic006G046700 Sobic008G153000--Sobic006G046700 Sobic008G149800 Sobic008G149800 Sobic008G153000--Sobic008G149800 Sobic002G264200 Sobic002G264200 Sobic008G153000--Sobic002G264200 Sobic001G155000 Sobic001G155000 Sobic008G153000--Sobic001G155000 Sobic003G445400 Sobic003G445400 Sobic008G153000--Sobic003G445400 Sobic003G059750 Sobic003G059750 Sobic008G153000--Sobic003G059750 Sobic007G026000 Sobic007G026000 Sobic008G153000--Sobic007G026000 Sobic010G069100 Sobic010G069100 Sobic008G153000--Sobic010G069100 Sobic004G084300 Sobic004G084300 Sobic010G236400--Sobic004G084300 Sobic010G236400--Sobic002G264200 Sobic010G236400--Sobic010G069100 Sobic002G126500 Sobic002G126500 Sobic010G236400--Sobic002G126500 Sobic004G274200 Sobic004G274200 Sobic010G236400--Sobic004G274200 Sobic010G236400--Sobic010G116600 Sobic007G183900 Sobic007G183900 Sobic010G236400--Sobic007G183900 Sobic002G071500 Sobic002G071500 Sobic010G236400--Sobic002G071500 Sobic003G401100 Sobic003G401100 Sobic010G236400--Sobic003G401100 Sobic007G132100--Sobic007G218000 Sobic007G132100--Sobic004G072100 Sobic007G132100--Sobic004G039600 Sobic004G178200 Sobic004G178200 Sobic007G132100--Sobic004G178200 Sobic007G132100--Sobic006G131000 Sobic007G132100--Sobic006G012500 Sobic007G132100--Sobic009G044800 Sobic008G099800 Sobic008G099800 Sobic007G132100--Sobic008G099800 Sobic007G132100--Sobic010G204400 Sobic002G154000 Sobic002G154000 Sobic003G416700--Sobic002G154000 Sobic003G416700--Sobic002G264200 Sobic001G461400 Sobic001G461400 Sobic003G416700--Sobic001G461400 Sobic003G416700--Sobic007G183900 Sobic001G051700 Sobic001G051700 Sobic003G416700--Sobic001G051700 Sobic003G360400 Sobic003G360400 Sobic003G416700--Sobic003G360400 Sobic009G119000 Sobic009G119000 Sobic003G416700--Sobic009G119000 Sobic001G063700 Sobic001G063700 Sobic003G416700--Sobic001G063700 Sobic003G416700--Sobic010G275500 Sobic006G131000--Sobic007G218000 Sobic006G131000--Sobic007G132100 Sobic006G131000--Sobic006G163800 Sobic006G131000--Sobic004G039600 Sobic001G096000 Sobic001G096000 Sobic006G131000--Sobic001G096000 Sobic006G174850 Sobic006G174850 Sobic006G131000--Sobic006G174850 Sobic006G131000--Sobic010G275500 Sobic006G131000--Sobic001G369000 Sobic006G131000--Sobic004G178200 Sobic010G116600--Sobic002G071500 Sobic002G299700 Sobic002G299700 Sobic010G116600--Sobic002G299700 Sobic003G093800 Sobic003G093800 Sobic010G116600--Sobic003G093800 Sobic010G116600--Sobic009G044800 Sobic010G116600--Sobic004G072100 Sobic010G116600--Sobic010G236400 Sobic010G116600--Sobic010G275500 Sobic003G408600 Sobic003G408600 Sobic010G116600--Sobic003G408600 Sobic010G116600--Sobic010G053800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.