Gene annotation
Transcriptome id Sobic.007G119200.1,Sobic.007G119200.2
Synonym Sb07g019460, GC4
Functional annotation intracellular protein transport protein USO1-related, putative, expressed
UniProt A0A1Z5R9D4 , C5YKM8
Pfam -
Panther DB PTHR18921
NCBI CDD KOG0993; Rab5 GTPase effector Rabaptin-5
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G46180 : golgin candidate 4
RAP-DB (Rice) LOC_Os08g29730.1 : intracellular protein transport protein USO1-related, putative, expressed
MaizeGDB (Corn) Zm00025a006023
Brachypodium KQJ98079 , KQJ98081 , KQJ98080
Barley -
Wheat TraesCS7A02G291900 , TraesCS7A02G291900 , TraesCS7B02G196700 , TraesCS7D02G287000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G034600 zinc ion binding protein, putative, expressed -
2 Sobic.004G146500 ataxin-2 related protein, putative, expressed -
3 Sobic.008G153000 MATH domain containing protein, expressed -
4 Sobic.001G109800 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member, putative, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
5 Sobic.007G041500 diacylglycerol kinase, putative, expressed -
6 Sobic.010G069100 expressed protein -
7 Sobic.007G218000 chloride transporter, chloride channel family, putative, expressed -
8 Sobic.002G264200 RNA recognition motif containing protein, expressed -
9 Sobic.001G088100 transcriptional adaptor, putative, expressed K11314: TADA2A, transcriptional adapter 2-alpha
10 Sobic.004G072100 centromere/kinetochore protein zw10, putative, expressed K11578: ZW10, protein transport protein DSL1/ZW10
11 Sobic.001G517500 Ubiquitin family domain containing protein, expressed K04523: UBQLN, ubiquilin
12 Sobic.010G204400 phox domain-containing protein, putative, expressed -
13 Sobic.010G116600 FHA domain containing protein, putative, expressed -
14 Sobic.010G236400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K12847: USP39, U4/U6.U5 tri-snRNP-associated protein 2
15 Sobic.001G016000 expressed protein K07759: poly(ADP-ribose) glycohydrolase
16 Sobic.002G071500 cleavage and polyadenylation specificity factor, putative, expressed K12830: SF3B3, SAP130, splicing factor 3B subunit 3
17 Sobic.002G153700 SWP, putative, expressed K15156: MED14, mediator of RNA polymerase II transcription subunit 14
18 Sobic.003G397800 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
19 Sobic.001G466700 peptidyl-prolyl cis-trans isomerase, putative, expressed K10598: PPIL2, CYC4, peptidyl-prolyl cis-trans isomerase-like 2
20 Sobic.007G046200 ELF7, putative, expressed K15174: RNA polymerase II-associated factor 1


Gene co-expression network
sample Sobic007G119200 Sobic007G119200 Sobic002G034600 Sobic002G034600 Sobic007G119200--Sobic002G034600 Sobic004G146500 Sobic004G146500 Sobic007G119200--Sobic004G146500 Sobic008G153000 Sobic008G153000 Sobic007G119200--Sobic008G153000 Sobic001G109800 Sobic001G109800 Sobic007G119200--Sobic001G109800 Sobic007G041500 Sobic007G041500 Sobic007G119200--Sobic007G041500 Sobic010G069100 Sobic010G069100 Sobic007G119200--Sobic010G069100 Sobic007G218000 Sobic007G218000 Sobic007G119200--Sobic007G218000 Sobic002G264200 Sobic002G264200 Sobic007G119200--Sobic002G264200 Sobic001G088100 Sobic001G088100 Sobic007G119200--Sobic001G088100 Sobic009G198100 Sobic009G198100 Sobic002G034600--Sobic009G198100 Sobic002G034600--Sobic007G119200 Sobic003G081000 Sobic003G081000 Sobic002G034600--Sobic003G081000 Sobic001G473600 Sobic001G473600 Sobic002G034600--Sobic001G473600 Sobic003G355000 Sobic003G355000 Sobic002G034600--Sobic003G355000 Sobic007G118200 Sobic007G118200 Sobic002G034600--Sobic007G118200 Sobic002G034600--Sobic002G264200 Sobic001G356600 Sobic001G356600 Sobic002G034600--Sobic001G356600 Sobic010G236400 Sobic010G236400 Sobic002G034600--Sobic010G236400 Sobic004G146500--Sobic001G109800 Sobic004G146500--Sobic010G069100 Sobic002G297200 Sobic002G297200 Sobic004G146500--Sobic002G297200 Sobic004G146500--Sobic007G119200 Sobic004G274200 Sobic004G274200 Sobic004G146500--Sobic004G274200 Sobic001G220300 Sobic001G220300 Sobic004G146500--Sobic001G220300 Sobic001G155000 Sobic001G155000 Sobic004G146500--Sobic001G155000 Sobic004G146500--Sobic002G034600 Sobic008G047800 Sobic008G047800 Sobic004G146500--Sobic008G047800 Sobic006G116100 Sobic006G116100 Sobic008G153000--Sobic006G116100 Sobic006G046700 Sobic006G046700 Sobic008G153000--Sobic006G046700 Sobic008G149800 Sobic008G149800 Sobic008G153000--Sobic008G149800 Sobic008G153000--Sobic002G264200 Sobic008G153000--Sobic001G155000 Sobic003G445400 Sobic003G445400 Sobic008G153000--Sobic003G445400 Sobic003G059750 Sobic003G059750 Sobic008G153000--Sobic003G059750 Sobic007G026000 Sobic007G026000 Sobic008G153000--Sobic007G026000 Sobic008G153000--Sobic010G069100 Sobic001G109800--Sobic004G146500 Sobic004G264400 Sobic004G264400 Sobic001G109800--Sobic004G264400 Sobic001G109800--Sobic002G297200 Sobic001G109800--Sobic007G119200 Sobic009G166300 Sobic009G166300 Sobic001G109800--Sobic009G166300 Sobic001G409600 Sobic001G409600 Sobic001G109800--Sobic001G409600 Sobic002G071500 Sobic002G071500 Sobic001G109800--Sobic002G071500 Sobic001G109800--Sobic001G220300 Sobic009G026500 Sobic009G026500 Sobic001G109800--Sobic009G026500 Sobic007G041500--Sobic007G119200 Sobic009G148300 Sobic009G148300 Sobic007G041500--Sobic009G148300 Sobic010G034000 Sobic010G034000 Sobic007G041500--Sobic010G034000 Sobic007G041500--Sobic008G153000 Sobic001G091400 Sobic001G091400 Sobic007G041500--Sobic001G091400 Sobic004G246100 Sobic004G246100 Sobic007G041500--Sobic004G246100 Sobic004G072100 Sobic004G072100 Sobic007G041500--Sobic004G072100 Sobic010G116600 Sobic010G116600 Sobic007G041500--Sobic010G116600 Sobic007G041500--Sobic002G071500 Sobic010G069100--Sobic002G071500 Sobic010G069100--Sobic002G264200 Sobic005G112300 Sobic005G112300 Sobic010G069100--Sobic005G112300 Sobic010G069100--Sobic008G047800 Sobic008G009700 Sobic008G009700 Sobic010G069100--Sobic008G009700 Sobic001G154900 Sobic001G154900 Sobic010G069100--Sobic001G154900 Sobic010G069100--Sobic004G146500 Sobic007G065400 Sobic007G065400 Sobic010G069100--Sobic007G065400 Sobic009G005500 Sobic009G005500 Sobic010G069100--Sobic009G005500 Sobic007G132100 Sobic007G132100 Sobic007G218000--Sobic007G132100 Sobic007G218000--Sobic004G072100 Sobic002G112700 Sobic002G112700 Sobic007G218000--Sobic002G112700 Sobic006G131000 Sobic006G131000 Sobic007G218000--Sobic006G131000 Sobic009G044800 Sobic009G044800 Sobic007G218000--Sobic009G044800 Sobic010G204400 Sobic010G204400 Sobic007G218000--Sobic010G204400 Sobic006G012500 Sobic006G012500 Sobic007G218000--Sobic006G012500 Sobic009G249700 Sobic009G249700 Sobic007G218000--Sobic009G249700 Sobic009G092400 Sobic009G092400 Sobic007G218000--Sobic009G092400 Sobic002G264200--Sobic010G069100 Sobic003G416700 Sobic003G416700 Sobic002G264200--Sobic003G416700 Sobic001G461400 Sobic001G461400 Sobic002G264200--Sobic001G461400 Sobic002G264200--Sobic008G153000 Sobic002G264200--Sobic010G236400 Sobic002G264200--Sobic002G071500 Sobic002G264200--Sobic007G065400 Sobic002G153700 Sobic002G153700 Sobic002G264200--Sobic002G153700 Sobic006G118700 Sobic006G118700 Sobic002G264200--Sobic006G118700 Sobic001G088100--Sobic009G005500 Sobic001G088100--Sobic007G119200 Sobic001G088100--Sobic010G069100 Sobic001G088100--Sobic010G236400 Sobic003G394300 Sobic003G394300 Sobic001G088100--Sobic003G394300 Sobic007G105100 Sobic007G105100 Sobic001G088100--Sobic007G105100 Sobic001G241200 Sobic001G241200 Sobic001G088100--Sobic001G241200 Sobic001G088100--Sobic004G274200 Sobic003G408600 Sobic003G408600 Sobic001G088100--Sobic003G408600
Octagon: transcription factors


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