Gene annotation
Transcriptome id Sobic.007G046200.2,Sobic.007G046200.1
Synonym ELF7, Sb07g003820
Functional annotation ELF7, putative, expressed
UniProt C5YH07
Pfam PF03985
Panther DB PTHR23188
NCBI CDD KOG2478; Putative RNA polymerase II regulator
KEGG Orthology K15174; RNA polymerase II-associated factor 1
Gene Ontology GO:0016593; Cdc73/Paf1 complex GO:0016570histone modification GO:0006368transcription elongation from RNA polymerase II promoter


Orthologs (automatic annotation)
TAIR AT1G79730 : hydroxyproline-rich glycoprotein family protein
RAP-DB (Rice) LOC_Os08g06070.1 : ELF7, putative, expressed
MaizeGDB (Corn) Zm00025a055160 , Zm00025a030085
Brachypodium PNT66741 , KQJ95325 , PNT66742
Barley -
Wheat TraesCS7B02G200900 , TraesCS7B02G200900 , TraesCS7D02G026600 , TraesCS7D02G026600 , TraesCS7A02G299200
Populus -


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cDNA sequences
Sobic.007G046200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G517500 Ubiquitin family domain containing protein, expressed K04523: UBQLN, ubiquilin
2 Sobic.001G473600 ZOS5-06 - C2H2 zinc finger protein, expressed -
3 Sobic.002G034600 zinc ion binding protein, putative, expressed -
4 Sobic.007G119200 intracellular protein transport protein USO1-related, putative, expressed -
5 Sobic.007G111100 PSF3 - Putative GINS complex subunit, expressed K10734: GINS complex subunit 3
6 Sobic.003G355000 Transcription initiation factor TFIID subunit A containing protein, expressed K03126: transcription initiation factor TFIID subunit 12
7 Sobic.010G202600 zinc finger, C3HC4 type domain containing protein, expressed K10661: MARCH6, E3 ubiquitin-protein ligase MARCH6
8 Sobic.001G109800 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member, putative, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
9 Sobic.003G081000 transcription factor, putative, expressed K14431: transcription factor TGA
10 Sobic.002G353600 expressed protein -
11 Sobic.002G262700 RNA recognition motif containing protein, putative, expressed K13155: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
12 Sobic.004G353000 ABC transporter, ATP-binding protein, putative, expressed K06158: ATP-binding cassette, subfamily F, member 3
13 Sobic.001G026200 heat shock protein DnaJ, putative, expressed K09534: DnaJ homolog subfamily C member 14
14 Sobic.007G146900 ARID/BRIGHT DNA-binding domain containing protein, expressed -
15 Sobic.007G026000 ATBET9, putative, expressed -
16 Sobic.003G397800 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
17 Sobic.003G352200 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
18 Sobic.006G186400 ZOS4-12 - C2H2 zinc finger protein, expressed -
19 Sobic.003G073000 IWS1 C-terminus family protein, putative, expressed K17498: SPN1, transcription factor SPN1
20 Sobic.005G207500 AAA-type ATPase family protein, putative, expressed -


Gene co-expression network
sample Sobic007G046200 Sobic007G046200 Sobic001G517500 Sobic001G517500 Sobic007G046200--Sobic001G517500 Sobic001G473600 Sobic001G473600 Sobic007G046200--Sobic001G473600 Sobic002G034600 Sobic002G034600 Sobic007G046200--Sobic002G034600 Sobic007G119200 Sobic007G119200 Sobic007G046200--Sobic007G119200 Sobic007G111100 Sobic007G111100 Sobic007G046200--Sobic007G111100 Sobic003G355000 Sobic003G355000 Sobic007G046200--Sobic003G355000 Sobic010G202600 Sobic010G202600 Sobic007G046200--Sobic010G202600 Sobic001G109800 Sobic001G109800 Sobic007G046200--Sobic001G109800 Sobic003G081000 Sobic003G081000 Sobic007G046200--Sobic003G081000 Sobic001G517500--Sobic003G355000 Sobic001G517500--Sobic007G119200 Sobic001G517500--Sobic007G046200 Sobic003G397800 Sobic003G397800 Sobic001G517500--Sobic003G397800 Sobic003G073000 Sobic003G073000 Sobic001G517500--Sobic003G073000 Sobic001G517500--Sobic002G034600 Sobic002G353600 Sobic002G353600 Sobic001G517500--Sobic002G353600 Sobic004G146500 Sobic004G146500 Sobic001G517500--Sobic004G146500 Sobic001G408700 Sobic001G408700 Sobic001G517500--Sobic001G408700 Sobic001G473600--Sobic002G034600 Sobic003G352200 Sobic003G352200 Sobic001G473600--Sobic003G352200 Sobic001G473600--Sobic007G046200 Sobic001G395100 Sobic001G395100 Sobic001G473600--Sobic001G395100 Sobic004G353000 Sobic004G353000 Sobic001G473600--Sobic004G353000 Sobic007G084100 Sobic007G084100 Sobic001G473600--Sobic007G084100 Sobic001G088100 Sobic001G088100 Sobic001G473600--Sobic001G088100 Sobic007G041300 Sobic007G041300 Sobic001G473600--Sobic007G041300 Sobic007G075900 Sobic007G075900 Sobic001G473600--Sobic007G075900 Sobic009G198100 Sobic009G198100 Sobic002G034600--Sobic009G198100 Sobic002G034600--Sobic007G119200 Sobic002G034600--Sobic003G081000 Sobic002G034600--Sobic001G473600 Sobic002G034600--Sobic003G355000 Sobic007G118200 Sobic007G118200 Sobic002G034600--Sobic007G118200 Sobic002G264200 Sobic002G264200 Sobic002G034600--Sobic002G264200 Sobic001G356600 Sobic001G356600 Sobic002G034600--Sobic001G356600 Sobic010G236400 Sobic010G236400 Sobic002G034600--Sobic010G236400 Sobic007G119200--Sobic002G034600 Sobic007G119200--Sobic004G146500 Sobic008G153000 Sobic008G153000 Sobic007G119200--Sobic008G153000 Sobic007G119200--Sobic001G109800 Sobic007G041500 Sobic007G041500 Sobic007G119200--Sobic007G041500 Sobic010G069100 Sobic010G069100 Sobic007G119200--Sobic010G069100 Sobic007G218000 Sobic007G218000 Sobic007G119200--Sobic007G218000 Sobic007G119200--Sobic002G264200 Sobic007G119200--Sobic001G088100 Sobic007G111100--Sobic010G202600 Sobic002G262700 Sobic002G262700 Sobic007G111100--Sobic002G262700 Sobic006G267300 Sobic006G267300 Sobic007G111100--Sobic006G267300 Sobic001G143500 Sobic001G143500 Sobic007G111100--Sobic001G143500 Sobic001G390500 Sobic001G390500 Sobic007G111100--Sobic001G390500 Sobic004G283000 Sobic004G283000 Sobic007G111100--Sobic004G283000 Sobic004G068500 Sobic004G068500 Sobic007G111100--Sobic004G068500 Sobic001G131800 Sobic001G131800 Sobic007G111100--Sobic001G131800 Sobic003G205501 Sobic003G205501 Sobic007G111100--Sobic003G205501 Sobic003G355000--Sobic009G198100 Sobic003G355000--Sobic002G034600 Sobic002G045400 Sobic002G045400 Sobic003G355000--Sobic002G045400 Sobic003G433500 Sobic003G433500 Sobic003G355000--Sobic003G433500 Sobic008G174300 Sobic008G174300 Sobic003G355000--Sobic008G174300 Sobic003G355000--Sobic001G517500 Sobic003G355000--Sobic007G118200 Sobic010G033400 Sobic010G033400 Sobic003G355000--Sobic010G033400 Sobic001G497900 Sobic001G497900 Sobic003G355000--Sobic001G497900 Sobic010G202600--Sobic007G111100 Sobic001G469800 Sobic001G469800 Sobic010G202600--Sobic001G469800 Sobic010G202600--Sobic001G131800 Sobic003G185200 Sobic003G185200 Sobic010G202600--Sobic003G185200 Sobic010G202600--Sobic003G205501 Sobic010G202600--Sobic006G267300 Sobic009G000500 Sobic009G000500 Sobic010G202600--Sobic009G000500 Sobic010G202600--Sobic008G174300 Sobic010G202600--Sobic003G081000 Sobic001G109800--Sobic004G146500 Sobic004G264400 Sobic004G264400 Sobic001G109800--Sobic004G264400 Sobic002G297200 Sobic002G297200 Sobic001G109800--Sobic002G297200 Sobic001G109800--Sobic007G119200 Sobic009G166300 Sobic009G166300 Sobic001G109800--Sobic009G166300 Sobic001G409600 Sobic001G409600 Sobic001G109800--Sobic001G409600 Sobic002G071500 Sobic002G071500 Sobic001G109800--Sobic002G071500 Sobic001G220300 Sobic001G220300 Sobic001G109800--Sobic001G220300 Sobic009G026500 Sobic009G026500 Sobic001G109800--Sobic009G026500 Sobic003G081000--Sobic007G118200 Sobic003G081000--Sobic008G174300 Sobic003G081000--Sobic002G034600 Sobic004G205600 Sobic004G205600 Sobic003G081000--Sobic004G205600 Sobic003G081000--Sobic009G198100 Sobic006G252700 Sobic006G252700 Sobic003G081000--Sobic006G252700 Sobic003G081000--Sobic010G033400 Sobic001G466700 Sobic001G466700 Sobic003G081000--Sobic001G466700 Sobic004G350100 Sobic004G350100 Sobic003G081000--Sobic004G350100
Octagon: transcription factors


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