Gene annotation
Transcriptome id Sobic.001G473600.1,Sobic.001G473600.2
Synonym Sb01g044380
Functional annotation ZOS5-06 - C2H2 zinc finger protein, expressed
UniProt A0A1B6QPY5 , A0A1Z5SBE4
Pfam -
Panther DB PTHR22938 PTHR22938:SF3 PTHR22938 PTHR22938:SF0
NCBI CDD KOG2231; Predicted E3 ubiquitin ligase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G62240 : RING/U-box superfamily protein,zinc ion binding;nucleic acid binding
RAP-DB (Rice) LOC_Os05g19970.1 : ZOS5-06 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a053197 , Zm00025a001075
Brachypodium KQK06930 , KQK06929
Barley HORVU1Hr1G032900.3 , HORVU1Hr1G032900.2 , HORVU1Hr1G032900.1 , HORVU1Hr1G032900.7 , HORVU1Hr1G032900.6 , HORVU1Hr1G032900.5 , HORVU1Hr1G032900.4 , HORVU1Hr1G032900.9 , HORVU1Hr1G032900.8 , HORVU1Hr1G032900.10 , HORVU5Hr1G086470.2 , HORVU5Hr1G086470.1 , HORVU5Hr1G086470.3 , HORVU5Hr1G086470.4
Wheat TraesCS1B02G154700 , TraesCS1B02G154700 , TraesCS1B02G154700 , TraesCS1A02G139500 , TraesCS1A02G139500 , TraesCS1A02G139500 , TraesCS5B02G347900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G034600 zinc ion binding protein, putative, expressed -
2 Sobic.003G352200 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
3 Sobic.007G046200 ELF7, putative, expressed K15174: RNA polymerase II-associated factor 1
4 Sobic.001G395100 - K12835: DDX42, ATP-dependent RNA helicase DDX42
5 Sobic.004G353000 ABC transporter, ATP-binding protein, putative, expressed K06158: ATP-binding cassette, subfamily F, member 3
6 Sobic.007G084100 expressed protein -
7 Sobic.001G088100 transcriptional adaptor, putative, expressed K11314: TADA2A, transcriptional adapter 2-alpha
8 Sobic.007G041300 expressed protein -
9 Sobic.007G075900 SKP1, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
10 Sobic.006G182200 WD domain, G-beta repeat domain containing protein, expressed -
11 Sobic.010G082700 expressed protein -
12 Sobic.009G044800 cullin, putative, expressed K03347: CUL1, cullin 1
13 Sobic.001G114500 ATP binding protein, putative, expressed K06883: uncharacterized protein
14 Sobic.007G191700 expressed protein K08507: unconventional SNARE in the endoplasmic reticulum protein 1
15 Sobic.006G121300 SWIRM domain containing protein, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
16 Sobic.001G497900 XS domain containing protein, expressed -
17 Sobic.007G009700 nucleic acid binding protein, putative, expressed K12839: SMNDC1, survival of motor neuron-related-splicing factor 30
18 Sobic.005G160400 zinc finger, C3HC4 type domain containing protein, expressed K19043: E3 ubiquitin-protein ligase RHF
19 Sobic.010G095700 DCN1-like protein 2, putative, expressed K17822: DCN1-like protein 1/2
20 Sobic.007G056500 cullin, putative, expressed K03869: cullin 3


Gene co-expression network
sample Sobic001G473600 Sobic001G473600 Sobic002G034600 Sobic002G034600 Sobic001G473600--Sobic002G034600 Sobic003G352200 Sobic003G352200 Sobic001G473600--Sobic003G352200 Sobic007G046200 Sobic007G046200 Sobic001G473600--Sobic007G046200 Sobic001G395100 Sobic001G395100 Sobic001G473600--Sobic001G395100 Sobic004G353000 Sobic004G353000 Sobic001G473600--Sobic004G353000 Sobic007G084100 Sobic007G084100 Sobic001G473600--Sobic007G084100 Sobic001G088100 Sobic001G088100 Sobic001G473600--Sobic001G088100 Sobic007G041300 Sobic007G041300 Sobic001G473600--Sobic007G041300 Sobic007G075900 Sobic007G075900 Sobic001G473600--Sobic007G075900 Sobic009G198100 Sobic009G198100 Sobic002G034600--Sobic009G198100 Sobic007G119200 Sobic007G119200 Sobic002G034600--Sobic007G119200 Sobic003G081000 Sobic003G081000 Sobic002G034600--Sobic003G081000 Sobic002G034600--Sobic001G473600 Sobic003G355000 Sobic003G355000 Sobic002G034600--Sobic003G355000 Sobic007G118200 Sobic007G118200 Sobic002G034600--Sobic007G118200 Sobic002G264200 Sobic002G264200 Sobic002G034600--Sobic002G264200 Sobic001G356600 Sobic001G356600 Sobic002G034600--Sobic001G356600 Sobic010G236400 Sobic010G236400 Sobic002G034600--Sobic010G236400 Sobic009G044800 Sobic009G044800 Sobic003G352200--Sobic009G044800 Sobic003G352200--Sobic001G473600 Sobic003G352200--Sobic002G034600 Sobic004G274200 Sobic004G274200 Sobic003G352200--Sobic004G274200 Sobic003G155900 Sobic003G155900 Sobic003G352200--Sobic003G155900 Sobic004G066200 Sobic004G066200 Sobic003G352200--Sobic004G066200 Sobic002G045600 Sobic002G045600 Sobic003G352200--Sobic002G045600 Sobic001G109800 Sobic001G109800 Sobic003G352200--Sobic001G109800 Sobic003G352200--Sobic001G088100 Sobic001G517500 Sobic001G517500 Sobic007G046200--Sobic001G517500 Sobic007G046200--Sobic001G473600 Sobic007G046200--Sobic002G034600 Sobic007G046200--Sobic007G119200 Sobic007G111100 Sobic007G111100 Sobic007G046200--Sobic007G111100 Sobic007G046200--Sobic003G355000 Sobic010G202600 Sobic010G202600 Sobic007G046200--Sobic010G202600 Sobic007G046200--Sobic001G109800 Sobic007G046200--Sobic003G081000 Sobic006G121300 Sobic006G121300 Sobic001G395100--Sobic006G121300 Sobic001G395100--Sobic002G034600 Sobic007G191700 Sobic007G191700 Sobic001G395100--Sobic007G191700 Sobic001G395100--Sobic001G473600 Sobic001G469800 Sobic001G469800 Sobic001G395100--Sobic001G469800 Sobic007G027700 Sobic007G027700 Sobic001G395100--Sobic007G027700 Sobic007G056500 Sobic007G056500 Sobic001G395100--Sobic007G056500 Sobic006G248500 Sobic006G248500 Sobic001G395100--Sobic006G248500 Sobic001G042200 Sobic001G042200 Sobic001G395100--Sobic001G042200 Sobic006G200700 Sobic006G200700 Sobic004G353000--Sobic006G200700 Sobic009G143800 Sobic009G143800 Sobic004G353000--Sobic009G143800 Sobic010G116600 Sobic010G116600 Sobic004G353000--Sobic010G116600 Sobic007G183900 Sobic007G183900 Sobic004G353000--Sobic007G183900 Sobic002G371300 Sobic002G371300 Sobic004G353000--Sobic002G371300 Sobic002G371700 Sobic002G371700 Sobic004G353000--Sobic002G371700 Sobic004G353000--Sobic009G044800 Sobic004G353000--Sobic001G473600 Sobic001G291800 Sobic001G291800 Sobic004G353000--Sobic001G291800 Sobic010G237900 Sobic010G237900 Sobic007G084100--Sobic010G237900 Sobic005G160400 Sobic005G160400 Sobic007G084100--Sobic005G160400 Sobic003G122500 Sobic003G122500 Sobic007G084100--Sobic003G122500 Sobic007G084100--Sobic001G473600 Sobic001G114500 Sobic001G114500 Sobic007G084100--Sobic001G114500 Sobic007G084100--Sobic007G183900 Sobic007G084100--Sobic003G352200 Sobic005G172500 Sobic005G172500 Sobic007G084100--Sobic005G172500 Sobic004G185800 Sobic004G185800 Sobic007G084100--Sobic004G185800 Sobic009G005500 Sobic009G005500 Sobic001G088100--Sobic009G005500 Sobic001G088100--Sobic007G119200 Sobic010G069100 Sobic010G069100 Sobic001G088100--Sobic010G069100 Sobic001G088100--Sobic010G236400 Sobic003G394300 Sobic003G394300 Sobic001G088100--Sobic003G394300 Sobic007G105100 Sobic007G105100 Sobic001G088100--Sobic007G105100 Sobic001G241200 Sobic001G241200 Sobic001G088100--Sobic001G241200 Sobic001G088100--Sobic004G274200 Sobic003G408600 Sobic003G408600 Sobic001G088100--Sobic003G408600 Sobic007G102700 Sobic007G102700 Sobic007G041300--Sobic007G102700 Sobic007G041300--Sobic001G473600 Sobic007G041300--Sobic007G191700 Sobic004G036300 Sobic004G036300 Sobic007G041300--Sobic004G036300 Sobic009G137700 Sobic009G137700 Sobic007G041300--Sobic009G137700 Sobic003G438900 Sobic003G438900 Sobic007G041300--Sobic003G438900 Sobic004G088200 Sobic004G088200 Sobic007G041300--Sobic004G088200 Sobic005G079800 Sobic005G079800 Sobic007G041300--Sobic005G079800 Sobic003G427100 Sobic003G427100 Sobic007G041300--Sobic003G427100 Sobic004G353200 Sobic004G353200 Sobic007G075900--Sobic004G353200 Sobic001G392300 Sobic001G392300 Sobic007G075900--Sobic001G392300 Sobic009G177500 Sobic009G177500 Sobic007G075900--Sobic009G177500 Sobic007G075900--Sobic009G044800 Sobic008G014500 Sobic008G014500 Sobic007G075900--Sobic008G014500 Sobic007G075900--Sobic004G274200 Sobic003G401100 Sobic003G401100 Sobic007G075900--Sobic003G401100 Sobic004G084300 Sobic004G084300 Sobic007G075900--Sobic004G084300 Sobic009G124700 Sobic009G124700 Sobic007G075900--Sobic009G124700
Octagon: transcription factors


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