Gene annotation
Transcriptome id Sobic.007G084100.1
Synonym Sb07g006890
Functional annotation expressed protein
UniProt C5YJ25
Pfam -
Panther DB PTHR33972 PTHR33972:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G16840 : -
RAP-DB (Rice) LOC_Os08g13320.1 : expressed protein
MaizeGDB (Corn) Zm00025a054941 , Zm00025a030894
Brachypodium KQJ95682 , KQJ95683
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G084100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G237900 RNA recognition motif containing protein, putative, expressed -
2 Sobic.005G160400 zinc finger, C3HC4 type domain containing protein, expressed K19043: E3 ubiquitin-protein ligase RHF
3 Sobic.003G122500 RNA binding protein, putative, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
4 Sobic.001G473600 ZOS5-06 - C2H2 zinc finger protein, expressed -
5 Sobic.001G114500 ATP binding protein, putative, expressed K06883: uncharacterized protein
6 Sobic.007G183900 ubiquitin family protein, putative, expressed -
7 Sobic.003G352200 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
8 Sobic.005G172500 WD repeat-containing protein, putative, expressed K08266: MLST8, target of rapamycin complex subunit LST8
9 Sobic.004G185800 expressed protein -
10 Sobic.007G091600 proline rich protein 3, putative, expressed -
11 Sobic.010G279700 signal peptide peptidase-like 2B, putative, expressed -
12 Sobic.001G354600 SAP domain containing protein, expressed K12875: ACIN1, apoptotic chromatin condensation inducer in the nucleus
13 Sobic.009G044800 cullin, putative, expressed K03347: CUL1, cullin 1
14 Sobic.001G493200 endonuclease/exonuclease/phosphatase family domain containing protein, expressed K12603: CNOT6, CCR4-NOT transcription complex subunit 6
15 Sobic.002G425500 ATPOT1, putative, expressed -
16 Sobic.007G078500 serine/threonine-protein kinase HT1, putative, expressed -
17 Sobic.001G207000 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
18 Sobic.010G265300 AAA-type ATPase family protein, putative, expressed -
19 Sobic.007G191700 expressed protein K08507: unconventional SNARE in the endoplasmic reticulum protein 1
20 Sobic.006G014100 serine-rich 25 kDa antigen protein, putative, expressed -


Gene co-expression network
sample Sobic007G084100 Sobic007G084100 Sobic010G237900 Sobic010G237900 Sobic007G084100--Sobic010G237900 Sobic005G160400 Sobic005G160400 Sobic007G084100--Sobic005G160400 Sobic003G122500 Sobic003G122500 Sobic007G084100--Sobic003G122500 Sobic001G473600 Sobic001G473600 Sobic007G084100--Sobic001G473600 Sobic001G114500 Sobic001G114500 Sobic007G084100--Sobic001G114500 Sobic007G183900 Sobic007G183900 Sobic007G084100--Sobic007G183900 Sobic003G352200 Sobic003G352200 Sobic007G084100--Sobic003G352200 Sobic005G172500 Sobic005G172500 Sobic007G084100--Sobic005G172500 Sobic004G185800 Sobic004G185800 Sobic007G084100--Sobic004G185800 Sobic004G129300 Sobic004G129300 Sobic010G237900--Sobic004G129300 Sobic007G191700 Sobic007G191700 Sobic010G237900--Sobic007G191700 Sobic001G002600 Sobic001G002600 Sobic010G237900--Sobic001G002600 Sobic010G237900--Sobic007G084100 Sobic002G425500 Sobic002G425500 Sobic010G237900--Sobic002G425500 Sobic006G014100 Sobic006G014100 Sobic010G237900--Sobic006G014100 Sobic003G121300 Sobic003G121300 Sobic010G237900--Sobic003G121300 Sobic004G156800 Sobic004G156800 Sobic010G237900--Sobic004G156800 Sobic010G145800 Sobic010G145800 Sobic010G237900--Sobic010G145800 Sobic009G092400 Sobic009G092400 Sobic005G160400--Sobic009G092400 Sobic005G160400--Sobic007G084100 Sobic005G160400--Sobic010G237900 Sobic010G092300 Sobic010G092300 Sobic005G160400--Sobic010G092300 Sobic002G347000 Sobic002G347000 Sobic005G160400--Sobic002G347000 Sobic005G160400--Sobic001G473600 Sobic010G265300 Sobic010G265300 Sobic005G160400--Sobic010G265300 Sobic006G121300 Sobic006G121300 Sobic005G160400--Sobic006G121300 Sobic005G160400--Sobic001G114500 Sobic003G122500--Sobic007G084100 Sobic003G122500--Sobic005G160400 Sobic003G123000 Sobic003G123000 Sobic003G122500--Sobic003G123000 Sobic001G241100 Sobic001G241100 Sobic003G122500--Sobic001G241100 Sobic001G119900 Sobic001G119900 Sobic003G122500--Sobic001G119900 Sobic010G171100 Sobic010G171100 Sobic003G122500--Sobic010G171100 Sobic002G047700 Sobic002G047700 Sobic003G122500--Sobic002G047700 Sobic006G199200 Sobic006G199200 Sobic003G122500--Sobic006G199200 Sobic004G257100 Sobic004G257100 Sobic003G122500--Sobic004G257100 Sobic002G034600 Sobic002G034600 Sobic001G473600--Sobic002G034600 Sobic001G473600--Sobic003G352200 Sobic007G046200 Sobic007G046200 Sobic001G473600--Sobic007G046200 Sobic001G395100 Sobic001G395100 Sobic001G473600--Sobic001G395100 Sobic004G353000 Sobic004G353000 Sobic001G473600--Sobic004G353000 Sobic001G473600--Sobic007G084100 Sobic001G088100 Sobic001G088100 Sobic001G473600--Sobic001G088100 Sobic007G041300 Sobic007G041300 Sobic001G473600--Sobic007G041300 Sobic007G075900 Sobic007G075900 Sobic001G473600--Sobic007G075900 Sobic003G132000 Sobic003G132000 Sobic001G114500--Sobic003G132000 Sobic001G114500--Sobic003G121300 Sobic008G103300 Sobic008G103300 Sobic001G114500--Sobic008G103300 Sobic009G164000 Sobic009G164000 Sobic001G114500--Sobic009G164000 Sobic001G114500--Sobic001G473600 Sobic001G114500--Sobic007G084100 Sobic001G114500--Sobic005G160400 Sobic009G258400 Sobic009G258400 Sobic001G114500--Sobic009G258400 Sobic001G114500--Sobic004G156800 Sobic003G416700 Sobic003G416700 Sobic007G183900--Sobic003G416700 Sobic006G118700 Sobic006G118700 Sobic007G183900--Sobic006G118700 Sobic003G360400 Sobic003G360400 Sobic007G183900--Sobic003G360400 Sobic010G236400 Sobic010G236400 Sobic007G183900--Sobic010G236400 Sobic009G044800 Sobic009G044800 Sobic007G183900--Sobic009G044800 Sobic010G069100 Sobic010G069100 Sobic007G183900--Sobic010G069100 Sobic010G275500 Sobic010G275500 Sobic007G183900--Sobic010G275500 Sobic001G354600 Sobic001G354600 Sobic007G183900--Sobic001G354600 Sobic002G264200 Sobic002G264200 Sobic007G183900--Sobic002G264200 Sobic003G352200--Sobic009G044800 Sobic003G352200--Sobic001G473600 Sobic003G352200--Sobic002G034600 Sobic004G274200 Sobic004G274200 Sobic003G352200--Sobic004G274200 Sobic003G155900 Sobic003G155900 Sobic003G352200--Sobic003G155900 Sobic004G066200 Sobic004G066200 Sobic003G352200--Sobic004G066200 Sobic002G045600 Sobic002G045600 Sobic003G352200--Sobic002G045600 Sobic001G109800 Sobic001G109800 Sobic003G352200--Sobic001G109800 Sobic003G352200--Sobic001G088100 Sobic004G131300 Sobic004G131300 Sobic005G172500--Sobic004G131300 Sobic006G148100 Sobic006G148100 Sobic005G172500--Sobic006G148100 Sobic009G056200 Sobic009G056200 Sobic005G172500--Sobic009G056200 Sobic001G493200 Sobic001G493200 Sobic005G172500--Sobic001G493200 Sobic001G227400 Sobic001G227400 Sobic005G172500--Sobic001G227400 Sobic002G371300 Sobic002G371300 Sobic005G172500--Sobic002G371300 Sobic002G142900 Sobic002G142900 Sobic005G172500--Sobic002G142900 Sobic003G408600 Sobic003G408600 Sobic005G172500--Sobic003G408600 Sobic005G172500--Sobic004G257100 Sobic006G041600 Sobic006G041600 Sobic004G185800--Sobic006G041600 Sobic001G433800 Sobic001G433800 Sobic004G185800--Sobic001G433800 Sobic003G398700 Sobic003G398700 Sobic004G185800--Sobic003G398700 Sobic003G188400 Sobic003G188400 Sobic004G185800--Sobic003G188400 Sobic008G063300 Sobic008G063300 Sobic004G185800--Sobic008G063300 Sobic006G096900 Sobic006G096900 Sobic004G185800--Sobic006G096900 Sobic006G252900 Sobic006G252900 Sobic004G185800--Sobic006G252900 Sobic003G168100 Sobic003G168100 Sobic004G185800--Sobic003G168100 Sobic004G185800--Sobic002G425500
Octagon: transcription factors


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