Gene annotation
Transcriptome id Sobic.007G191700.2
Synonym Sb07g026070
Functional annotation expressed protein
UniProt C5YHR0
Pfam PF09753
Panther DB PTHR13050
NCBI CDD -
KEGG Orthology K08507; unconventional SNARE in the endoplasmic reticulum protein 1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G55600 : Membrane fusion protein Use1
RAP-DB (Rice) LOC_Os08g42110.1 : expressed protein
MaizeGDB (Corn) Zm00025a021719 , Zm00025a005286
Brachypodium KQJ99149 , KQJ99148
Barley HORVU7Hr1G054730.8 , HORVU7Hr1G054730.13 , HORVU7Hr1G054730.2 , HORVU7Hr1G054730.3 , HORVU7Hr1G054730.1 , HORVU7Hr1G054730.6 , HORVU7Hr1G054730.7 , HORVU7Hr1G054730.4 , HORVU7Hr1G054730.9 , HORVU7Hr1G054730.10 , HORVU7Hr1G054730.11 , HORVU7Hr1G054730.12 , HORVU7Hr1G054730.14 , HORVU7Hr1G054730.15 , HORVU7Hr1G054730.16 , HORVU7Hr1G054730.17
Wheat TraesCS7D02G263000 , TraesCS6A02G028000 , TraesCS6D02G031300 , TraesCS6A02G028000 , TraesCS6B02G039400 , TraesCS6D02G059200 , TraesCS6A02G028000 , TraesCS7A02G261200
Populus -


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cDNA sequences
Sobic.007G191700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G237900 RNA recognition motif containing protein, putative, expressed -
2 Sobic.007G091600 proline rich protein 3, putative, expressed -
3 Sobic.004G129300 chromatin modification-related protein EAF3, putative, expressed K11339: MORF4L1, MRG15, mortality factor 4-like protein 1
4 Sobic.001G395100 - K12835: DDX42, ATP-dependent RNA helicase DDX42
5 Sobic.005G079800 transcriptional corepressor SEUSS, putative, expressed -
6 Sobic.010G279700 signal peptide peptidase-like 2B, putative, expressed -
7 Sobic.006G118700 MYB family transcription factor, putative, expressed -
8 Sobic.007G041300 expressed protein -
9 Sobic.001G473600 ZOS5-06 - C2H2 zinc finger protein, expressed -
10 Sobic.006G248500 expressed protein -
11 Sobic.001G002600 expressed protein -
12 Sobic.006G014100 serine-rich 25 kDa antigen protein, putative, expressed -
13 Sobic.009G195200 ESP1, putative, expressed -
14 Sobic.007G027700 expressed protein -
15 Sobic.006G121300 SWIRM domain containing protein, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
16 Sobic.003G401100 WW domain containing protein, expressed K12865: PQBP1, polyglutamine-binding protein 1
17 Sobic.007G183300 expressed protein -
18 Sobic.007G183900 ubiquitin family protein, putative, expressed -
19 Sobic.003G438900 FYVE zinc finger domain containing protein, expressed -
20 Sobic.004G156500 expressed protein -


Gene co-expression network
sample Sobic007G191700 Sobic007G191700 Sobic010G237900 Sobic010G237900 Sobic007G191700--Sobic010G237900 Sobic007G091600 Sobic007G091600 Sobic007G191700--Sobic007G091600 Sobic004G129300 Sobic004G129300 Sobic007G191700--Sobic004G129300 Sobic001G395100 Sobic001G395100 Sobic007G191700--Sobic001G395100 Sobic005G079800 Sobic005G079800 Sobic007G191700--Sobic005G079800 Sobic010G279700 Sobic010G279700 Sobic007G191700--Sobic010G279700 Sobic006G118700 Sobic006G118700 Sobic007G191700--Sobic006G118700 Sobic007G041300 Sobic007G041300 Sobic007G191700--Sobic007G041300 Sobic001G473600 Sobic001G473600 Sobic007G191700--Sobic001G473600 Sobic010G237900--Sobic004G129300 Sobic010G237900--Sobic007G191700 Sobic001G002600 Sobic001G002600 Sobic010G237900--Sobic001G002600 Sobic007G084100 Sobic007G084100 Sobic010G237900--Sobic007G084100 Sobic002G425500 Sobic002G425500 Sobic010G237900--Sobic002G425500 Sobic006G014100 Sobic006G014100 Sobic010G237900--Sobic006G014100 Sobic003G121300 Sobic003G121300 Sobic010G237900--Sobic003G121300 Sobic004G156800 Sobic004G156800 Sobic010G237900--Sobic004G156800 Sobic010G145800 Sobic010G145800 Sobic010G237900--Sobic010G145800 Sobic007G091600--Sobic006G118700 Sobic007G091600--Sobic007G191700 Sobic002G264200 Sobic002G264200 Sobic007G091600--Sobic002G264200 Sobic004G084300 Sobic004G084300 Sobic007G091600--Sobic004G084300 Sobic005G021500 Sobic005G021500 Sobic007G091600--Sobic005G021500 Sobic010G236400 Sobic010G236400 Sobic007G091600--Sobic010G236400 Sobic009G177500 Sobic009G177500 Sobic007G091600--Sobic009G177500 Sobic007G091600--Sobic004G129300 Sobic003G394300 Sobic003G394300 Sobic007G091600--Sobic003G394300 Sobic004G129300--Sobic010G237900 Sobic004G129300--Sobic007G191700 Sobic004G129300--Sobic001G002600 Sobic004G129300--Sobic007G091600 Sobic007G090430 Sobic007G090430 Sobic004G129300--Sobic007G090430 Sobic008G173100 Sobic008G173100 Sobic004G129300--Sobic008G173100 Sobic001G087600 Sobic001G087600 Sobic004G129300--Sobic001G087600 Sobic007G183300 Sobic007G183300 Sobic004G129300--Sobic007G183300 Sobic001G384300 Sobic001G384300 Sobic004G129300--Sobic001G384300 Sobic006G121300 Sobic006G121300 Sobic001G395100--Sobic006G121300 Sobic002G034600 Sobic002G034600 Sobic001G395100--Sobic002G034600 Sobic001G395100--Sobic007G191700 Sobic001G395100--Sobic001G473600 Sobic001G469800 Sobic001G469800 Sobic001G395100--Sobic001G469800 Sobic007G027700 Sobic007G027700 Sobic001G395100--Sobic007G027700 Sobic007G056500 Sobic007G056500 Sobic001G395100--Sobic007G056500 Sobic006G248500 Sobic006G248500 Sobic001G395100--Sobic006G248500 Sobic001G042200 Sobic001G042200 Sobic001G395100--Sobic001G042200 Sobic003G438900 Sobic003G438900 Sobic005G079800--Sobic003G438900 Sobic001G253200 Sobic001G253200 Sobic005G079800--Sobic001G253200 Sobic005G079800--Sobic007G191700 Sobic002G153700 Sobic002G153700 Sobic005G079800--Sobic002G153700 Sobic005G079800--Sobic005G021500 Sobic003G427100 Sobic003G427100 Sobic005G079800--Sobic003G427100 Sobic007G054400 Sobic007G054400 Sobic005G079800--Sobic007G054400 Sobic010G194700 Sobic010G194700 Sobic005G079800--Sobic010G194700 Sobic004G096500 Sobic004G096500 Sobic005G079800--Sobic004G096500 Sobic001G281600 Sobic001G281600 Sobic010G279700--Sobic001G281600 Sobic008G083000 Sobic008G083000 Sobic010G279700--Sobic008G083000 Sobic003G401100 Sobic003G401100 Sobic010G279700--Sobic003G401100 Sobic001G094900 Sobic001G094900 Sobic010G279700--Sobic001G094900 Sobic010G279700--Sobic007G191700 Sobic005G106500 Sobic005G106500 Sobic010G279700--Sobic005G106500 Sobic008G092300 Sobic008G092300 Sobic010G279700--Sobic008G092300 Sobic007G203200 Sobic007G203200 Sobic010G279700--Sobic007G203200 Sobic004G021200 Sobic004G021200 Sobic010G279700--Sobic004G021200 Sobic007G183900 Sobic007G183900 Sobic006G118700--Sobic007G183900 Sobic006G118700--Sobic002G264200 Sobic010G112100 Sobic010G112100 Sobic006G118700--Sobic010G112100 Sobic003G360400 Sobic003G360400 Sobic006G118700--Sobic003G360400 Sobic004G355800 Sobic004G355800 Sobic006G118700--Sobic004G355800 Sobic010G069100 Sobic010G069100 Sobic006G118700--Sobic010G069100 Sobic002G366400 Sobic002G366400 Sobic006G118700--Sobic002G366400 Sobic006G118700--Sobic010G236400 Sobic006G118700--Sobic007G091600 Sobic007G102700 Sobic007G102700 Sobic007G041300--Sobic007G102700 Sobic007G041300--Sobic001G473600 Sobic007G041300--Sobic007G191700 Sobic004G036300 Sobic004G036300 Sobic007G041300--Sobic004G036300 Sobic009G137700 Sobic009G137700 Sobic007G041300--Sobic009G137700 Sobic007G041300--Sobic003G438900 Sobic004G088200 Sobic004G088200 Sobic007G041300--Sobic004G088200 Sobic007G041300--Sobic005G079800 Sobic007G041300--Sobic003G427100 Sobic001G473600--Sobic002G034600 Sobic003G352200 Sobic003G352200 Sobic001G473600--Sobic003G352200 Sobic007G046200 Sobic007G046200 Sobic001G473600--Sobic007G046200 Sobic001G473600--Sobic001G395100 Sobic004G353000 Sobic004G353000 Sobic001G473600--Sobic004G353000 Sobic001G473600--Sobic007G084100 Sobic001G088100 Sobic001G088100 Sobic001G473600--Sobic001G088100 Sobic001G473600--Sobic007G041300 Sobic007G075900 Sobic007G075900 Sobic001G473600--Sobic007G075900
Octagon: transcription factors


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