Gene annotation
Transcriptome id Sobic.001G002600.1,Sobic.001G002600.2
Synonym Sb01g000355
Functional annotation expressed protein
UniProt A0A1B6QGM0 , A0A1B6QGM1
Pfam PF04266
Panther DB PTHR12963
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G20410 : RNA-binding ASCH domain protein
RAP-DB (Rice) LOC_Os03g64250.2 : expressed protein
MaizeGDB (Corn) Zm00025a016279
Brachypodium KQK11960 , KQK11961
Barley HORVU1Hr1G046150.2 , HORVU1Hr1G046150.1 , HORVU0Hr1G001200.2 , HORVU0Hr1G001200.1 , HORVU6Hr1G000320.1 , HORVU6Hr1G000320.2 , HORVU4Hr1G051940.2 , HORVU4Hr1G021560.1
Wheat TraesCSU02G189600 , TraesCSU02G189600 , TraesCS5D02G549500 , TraesCS5B02G565200 , TraesCS5D02G549500 , TraesCSU02G167000 , TraesCSU02G167000 , TraesCS5D02G549500 , TraesCSU02G167000 , TraesCS5D02G549500 , TraesCS5B02G565200
Populus -


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cDNA sequences
Sobic.001G002600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G237900 RNA recognition motif containing protein, putative, expressed -
2 Sobic.004G129300 chromatin modification-related protein EAF3, putative, expressed K11339: MORF4L1, MRG15, mortality factor 4-like protein 1
3 Sobic.010G145800 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
4 Sobic.004G155600 dnaJ domain containing protein, expressed -
5 Sobic.006G118700 MYB family transcription factor, putative, expressed -
6 Sobic.007G191700 expressed protein K08507: unconventional SNARE in the endoplasmic reticulum protein 1
7 Sobic.006G096900 expressed protein -
8 Sobic.006G014100 serine-rich 25 kDa antigen protein, putative, expressed -
9 Sobic.003G133900 exonuclease, putative, expressed K18417: ERI1 exoribonuclease 2
10 Sobic.004G355800 expressed protein -
11 Sobic.008G047300 Trihelix Family(PubMedID : 24864043)@homeodomain, putative, expressed -
12 Sobic.002G425500 ATPOT1, putative, expressed -
13 Sobic.001G020000 metallo-beta-lactamase, putative, expressed K14402: CPSF2, cleavage and polyadenylation specificity factor subunit 2
14 Sobic.001G384300 myb-like DNA-binding domain containing protein, expressed -
15 Sobic.007G203200 RNA recognition motif containing protein, putative, expressed K13201: TIA1, nucleolysin TIA-1/TIAR
16 Sobic.007G091600 proline rich protein 3, putative, expressed -
17 Sobic.004G235300 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
18 Sobic.002G083500 OsFBX136 - F-box domain containing protein, expressed -
19 Sobic.001G227200 haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed K00861: RFK, riboflavin kinase
20 Sobic.006G210000 zinc finger domain, LSD1 subclass family protein, expressed -


Gene co-expression network
sample Sobic001G002600 Sobic001G002600 Sobic010G237900 Sobic010G237900 Sobic001G002600--Sobic010G237900 Sobic004G129300 Sobic004G129300 Sobic001G002600--Sobic004G129300 Sobic010G145800 Sobic010G145800 Sobic001G002600--Sobic010G145800 Sobic004G155600 Sobic004G155600 Sobic001G002600--Sobic004G155600 Sobic006G118700 Sobic006G118700 Sobic001G002600--Sobic006G118700 Sobic007G191700 Sobic007G191700 Sobic001G002600--Sobic007G191700 Sobic006G096900 Sobic006G096900 Sobic001G002600--Sobic006G096900 Sobic006G014100 Sobic006G014100 Sobic001G002600--Sobic006G014100 Sobic003G133900 Sobic003G133900 Sobic001G002600--Sobic003G133900 Sobic010G237900--Sobic004G129300 Sobic010G237900--Sobic007G191700 Sobic010G237900--Sobic001G002600 Sobic007G084100 Sobic007G084100 Sobic010G237900--Sobic007G084100 Sobic002G425500 Sobic002G425500 Sobic010G237900--Sobic002G425500 Sobic010G237900--Sobic006G014100 Sobic003G121300 Sobic003G121300 Sobic010G237900--Sobic003G121300 Sobic004G156800 Sobic004G156800 Sobic010G237900--Sobic004G156800 Sobic010G237900--Sobic010G145800 Sobic004G129300--Sobic010G237900 Sobic004G129300--Sobic007G191700 Sobic004G129300--Sobic001G002600 Sobic007G091600 Sobic007G091600 Sobic004G129300--Sobic007G091600 Sobic007G090430 Sobic007G090430 Sobic004G129300--Sobic007G090430 Sobic008G173100 Sobic008G173100 Sobic004G129300--Sobic008G173100 Sobic001G087600 Sobic001G087600 Sobic004G129300--Sobic001G087600 Sobic007G183300 Sobic007G183300 Sobic004G129300--Sobic007G183300 Sobic001G384300 Sobic001G384300 Sobic004G129300--Sobic001G384300 Sobic007G203200 Sobic007G203200 Sobic010G145800--Sobic007G203200 Sobic010G140400 Sobic010G140400 Sobic010G145800--Sobic010G140400 Sobic010G145800--Sobic001G002600 Sobic001G227200 Sobic001G227200 Sobic010G145800--Sobic001G227200 Sobic009G260500 Sobic009G260500 Sobic010G145800--Sobic009G260500 Sobic007G011600 Sobic007G011600 Sobic010G145800--Sobic007G011600 Sobic001G083400 Sobic001G083400 Sobic010G145800--Sobic001G083400 Sobic010G145800--Sobic010G237900 Sobic001G219600 Sobic001G219600 Sobic010G145800--Sobic001G219600 Sobic004G155600--Sobic006G014100 Sobic006G270600 Sobic006G270600 Sobic004G155600--Sobic006G270600 Sobic006G080400 Sobic006G080400 Sobic004G155600--Sobic006G080400 Sobic004G355800 Sobic004G355800 Sobic004G155600--Sobic004G355800 Sobic004G155600--Sobic002G425500 Sobic004G155600--Sobic006G118700 Sobic006G210000 Sobic006G210000 Sobic004G155600--Sobic006G210000 Sobic002G145800 Sobic002G145800 Sobic004G155600--Sobic002G145800 Sobic004G155600--Sobic001G002600 Sobic007G183900 Sobic007G183900 Sobic006G118700--Sobic007G183900 Sobic002G264200 Sobic002G264200 Sobic006G118700--Sobic002G264200 Sobic010G112100 Sobic010G112100 Sobic006G118700--Sobic010G112100 Sobic003G360400 Sobic003G360400 Sobic006G118700--Sobic003G360400 Sobic006G118700--Sobic004G355800 Sobic010G069100 Sobic010G069100 Sobic006G118700--Sobic010G069100 Sobic002G366400 Sobic002G366400 Sobic006G118700--Sobic002G366400 Sobic010G236400 Sobic010G236400 Sobic006G118700--Sobic010G236400 Sobic006G118700--Sobic007G091600 Sobic007G191700--Sobic010G237900 Sobic007G191700--Sobic007G091600 Sobic007G191700--Sobic004G129300 Sobic001G395100 Sobic001G395100 Sobic007G191700--Sobic001G395100 Sobic005G079800 Sobic005G079800 Sobic007G191700--Sobic005G079800 Sobic010G279700 Sobic010G279700 Sobic007G191700--Sobic010G279700 Sobic007G191700--Sobic006G118700 Sobic007G041300 Sobic007G041300 Sobic007G191700--Sobic007G041300 Sobic001G473600 Sobic001G473600 Sobic007G191700--Sobic001G473600 Sobic008G063300 Sobic008G063300 Sobic006G096900--Sobic008G063300 Sobic009G177500 Sobic009G177500 Sobic006G096900--Sobic009G177500 Sobic006G252900 Sobic006G252900 Sobic006G096900--Sobic006G252900 Sobic006G096900--Sobic003G360400 Sobic003G095900 Sobic003G095900 Sobic006G096900--Sobic003G095900 Sobic006G056700 Sobic006G056700 Sobic006G096900--Sobic006G056700 Sobic001G433800 Sobic001G433800 Sobic006G096900--Sobic001G433800 Sobic006G096900--Sobic001G384300 Sobic009G044800 Sobic009G044800 Sobic006G096900--Sobic009G044800 Sobic006G014100--Sobic004G155600 Sobic006G014100--Sobic010G237900 Sobic004G266900 Sobic004G266900 Sobic006G014100--Sobic004G266900 Sobic006G014100--Sobic007G191700 Sobic006G014100--Sobic001G395100 Sobic006G014100--Sobic006G270600 Sobic006G014100--Sobic001G002600 Sobic003G379200 Sobic003G379200 Sobic006G014100--Sobic003G379200 Sobic008G047300 Sobic008G047300 Sobic006G014100--Sobic008G047300 Sobic004G309900 Sobic004G309900 Sobic003G133900--Sobic004G309900 Sobic001G493200 Sobic001G493200 Sobic003G133900--Sobic001G493200 Sobic002G083500 Sobic002G083500 Sobic003G133900--Sobic002G083500 Sobic001G398800 Sobic001G398800 Sobic003G133900--Sobic001G398800 Sobic003G133900--Sobic007G183900 Sobic005G172500 Sobic005G172500 Sobic003G133900--Sobic005G172500 Sobic003G133900--Sobic006G210000 Sobic004G200200 Sobic004G200200 Sobic003G133900--Sobic004G200200 Sobic007G071200 Sobic007G071200 Sobic003G133900--Sobic007G071200
Octagon: transcription factors


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