Gene annotation
Transcriptome id Sobic.004G355800.1
Synonym Sb04g038230
Functional annotation expressed protein
UniProt A0A1Z5RQR7
Pfam -
Panther DB PTHR21717 PTHR21717:SF28
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G14770 : RING/FYVE/PHD zinc finger superfamily protein
RAP-DB (Rice) LOC_Os11g06190.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G200900 SCC3, putative, expressed K06671: STAG1_2, SCC3, cohesin complex subunit SA-1/2
2 Sobic.006G118700 MYB family transcription factor, putative, expressed -
3 Sobic.006G210000 zinc finger domain, LSD1 subclass family protein, expressed -
4 Sobic.002G154000 EDM2, putative, expressed -
5 Sobic.004G155600 dnaJ domain containing protein, expressed -
6 Sobic.005G191900 transporter family protein, putative, expressed -
7 Sobic.006G067600 histone deacetylase, putative, expressed K06067: histone deacetylase 1/2
8 Sobic.004G156500 expressed protein -
9 Sobic.008G002500 RCD1, putative, expressed -
10 Sobic.008G080500 expressed protein -
11 Sobic.006G080400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11851: ubiquitin carboxyl-terminal hydrolase 30
12 Sobic.009G088000 expressed protein -
13 Sobic.001G461400 pre-mRNA-processing factor 39, putative, expressed K13217: PRPF39, pre-mRNA-processing factor 39
14 Sobic.003G312700 glycosyl hydrolase family 47 domain contain protein, expressed K10085: ER degradation enhancer, mannosidase alpha-like 2
15 Sobic.003G416700 homeobox domain containing protein, expressed -
16 Sobic.003G360400 ulp1 protease family protein, putative, expressed K08596: sentrin-specific protease 7
17 Sobic.010G065300 expressed protein K11643: CHD4, chromodomain-helicase-DNA-binding protein 4
18 Sobic.008G047300 Trihelix Family(PubMedID : 24864043)@homeodomain, putative, expressed -
19 Sobic.006G240100 BRCA1-associated protein, putative, expressed K10632: BRCA1-associated protein
20 Sobic.010G145800 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2


Gene co-expression network
sample Sobic004G355800 Sobic004G355800 Sobic005G200900 Sobic005G200900 Sobic004G355800--Sobic005G200900 Sobic006G118700 Sobic006G118700 Sobic004G355800--Sobic006G118700 Sobic006G210000 Sobic006G210000 Sobic004G355800--Sobic006G210000 Sobic002G154000 Sobic002G154000 Sobic004G355800--Sobic002G154000 Sobic004G155600 Sobic004G155600 Sobic004G355800--Sobic004G155600 Sobic005G191900 Sobic005G191900 Sobic004G355800--Sobic005G191900 Sobic006G067600 Sobic006G067600 Sobic004G355800--Sobic006G067600 Sobic004G156500 Sobic004G156500 Sobic004G355800--Sobic004G156500 Sobic008G002500 Sobic008G002500 Sobic004G355800--Sobic008G002500 Sobic005G200900--Sobic004G355800 Sobic005G200900--Sobic002G154000 Sobic003G360400 Sobic003G360400 Sobic005G200900--Sobic003G360400 Sobic009G251500 Sobic009G251500 Sobic005G200900--Sobic009G251500 Sobic009G088000 Sobic009G088000 Sobic005G200900--Sobic009G088000 Sobic005G200900--Sobic006G118700 Sobic005G200900--Sobic006G210000 Sobic005G200900--Sobic004G156500 Sobic005G200900--Sobic008G002500 Sobic007G183900 Sobic007G183900 Sobic006G118700--Sobic007G183900 Sobic002G264200 Sobic002G264200 Sobic006G118700--Sobic002G264200 Sobic010G112100 Sobic010G112100 Sobic006G118700--Sobic010G112100 Sobic006G118700--Sobic003G360400 Sobic006G118700--Sobic004G355800 Sobic010G069100 Sobic010G069100 Sobic006G118700--Sobic010G069100 Sobic002G366400 Sobic002G366400 Sobic006G118700--Sobic002G366400 Sobic010G236400 Sobic010G236400 Sobic006G118700--Sobic010G236400 Sobic007G091600 Sobic007G091600 Sobic006G118700--Sobic007G091600 Sobic010G001100 Sobic010G001100 Sobic006G210000--Sobic010G001100 Sobic003G293200 Sobic003G293200 Sobic006G210000--Sobic003G293200 Sobic006G210000--Sobic004G156500 Sobic010G065300 Sobic010G065300 Sobic006G210000--Sobic010G065300 Sobic006G210000--Sobic004G355800 Sobic007G031600 Sobic007G031600 Sobic006G210000--Sobic007G031600 Sobic008G100100 Sobic008G100100 Sobic006G210000--Sobic008G100100 Sobic006G052300 Sobic006G052300 Sobic006G210000--Sobic006G052300 Sobic006G210000--Sobic005G191900 Sobic002G154000--Sobic003G360400 Sobic003G416700 Sobic003G416700 Sobic002G154000--Sobic003G416700 Sobic002G154000--Sobic010G112100 Sobic001G063700 Sobic001G063700 Sobic002G154000--Sobic001G063700 Sobic002G154000--Sobic010G001100 Sobic001G461400 Sobic001G461400 Sobic002G154000--Sobic001G461400 Sobic001G433800 Sobic001G433800 Sobic002G154000--Sobic001G433800 Sobic004G048800 Sobic004G048800 Sobic002G154000--Sobic004G048800 Sobic007G063000 Sobic007G063000 Sobic002G154000--Sobic007G063000 Sobic006G014100 Sobic006G014100 Sobic004G155600--Sobic006G014100 Sobic006G270600 Sobic006G270600 Sobic004G155600--Sobic006G270600 Sobic006G080400 Sobic006G080400 Sobic004G155600--Sobic006G080400 Sobic004G155600--Sobic004G355800 Sobic002G425500 Sobic002G425500 Sobic004G155600--Sobic002G425500 Sobic004G155600--Sobic006G118700 Sobic004G155600--Sobic006G210000 Sobic002G145800 Sobic002G145800 Sobic004G155600--Sobic002G145800 Sobic001G002600 Sobic001G002600 Sobic004G155600--Sobic001G002600 Sobic001G311500 Sobic001G311500 Sobic005G191900--Sobic001G311500 Sobic001G363500 Sobic001G363500 Sobic005G191900--Sobic001G363500 Sobic010G094700 Sobic010G094700 Sobic005G191900--Sobic010G094700 Sobic009G247400 Sobic009G247400 Sobic005G191900--Sobic009G247400 Sobic005G191900--Sobic010G112100 Sobic007G157000 Sobic007G157000 Sobic005G191900--Sobic007G157000 Sobic005G191900--Sobic006G118700 Sobic008G028700 Sobic008G028700 Sobic005G191900--Sobic008G028700 Sobic005G191900--Sobic008G002500 Sobic002G357100 Sobic002G357100 Sobic006G067600--Sobic002G357100 Sobic006G067600--Sobic004G355800 Sobic006G240100 Sobic006G240100 Sobic006G067600--Sobic006G240100 Sobic006G067600--Sobic006G080400 Sobic006G067600--Sobic004G155600 Sobic003G312700 Sobic003G312700 Sobic006G067600--Sobic003G312700 Sobic001G346900 Sobic001G346900 Sobic006G067600--Sobic001G346900 Sobic006G067600--Sobic005G200900 Sobic006G067600--Sobic001G461400 Sobic004G156500--Sobic008G100100 Sobic004G156500--Sobic010G065300 Sobic001G134300 Sobic001G134300 Sobic004G156500--Sobic001G134300 Sobic001G306900 Sobic001G306900 Sobic004G156500--Sobic001G306900 Sobic004G156500--Sobic006G118700 Sobic004G156500--Sobic006G210000 Sobic004G156500--Sobic003G416700 Sobic004G156500--Sobic002G357100 Sobic002G259800 Sobic002G259800 Sobic004G156500--Sobic002G259800 Sobic006G040800 Sobic006G040800 Sobic008G002500--Sobic006G040800 Sobic008G002500--Sobic001G063700 Sobic001G354600 Sobic001G354600 Sobic008G002500--Sobic001G354600 Sobic008G002500--Sobic003G360400 Sobic008G002500--Sobic009G088000 Sobic003G188400 Sobic003G188400 Sobic008G002500--Sobic003G188400 Sobic001G522600 Sobic001G522600 Sobic008G002500--Sobic001G522600 Sobic008G002500--Sobic001G433800 Sobic004G332400 Sobic004G332400 Sobic008G002500--Sobic004G332400
Octagon: transcription factors


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