Gene annotation
Transcriptome id Sobic.008G002500.6,Sobic.008G002500.5,Sobic.008G002500.3,Sobic.008G002500.4
Synonym RCD1, CEO1, Sb08g000400, ATP8, CEO
Functional annotation RCD1, putative, expressed
UniProt A0A0K1H119 , C5YQ06
Pfam PF00644 PF12174
Panther DB PTHR32263 PTHR32263:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003950; NAD+ ADP-ribosyltransferase activity


Orthologs (automatic annotation)
TAIR AT1G32230 : WWE protein-protein interaction domain protein family
RAP-DB (Rice) LOC_Os04g57640.1 : RCD1, putative, expressed
MaizeGDB (Corn) Zm00025a033246
Brachypodium PNT77468 , PNT77469 , KQK21831 , PNT77470 , KQJ85238 , PNT77471
Barley HORVU7Hr1G095570.2 , HORVU7Hr1G095570.9 , HORVU7Hr1G095570.12 , HORVU7Hr1G095570.17 , HORVU7Hr1G095570.16 , HORVU7Hr1G095570.15 , HORVU7Hr1G095570.14 , HORVU7Hr1G095570.13 , HORVU7Hr1G095570.11 , HORVU7Hr1G095570.10 , HORVU7Hr1G095570.19 , HORVU7Hr1G095570.18 , HORVU7Hr1G095570.8 , HORVU7Hr1G095570.7 , HORVU7Hr1G095570.6 , HORVU7Hr1G095570.5 , HORVU7Hr1G095570.4 , HORVU7Hr1G095570.3 , HORVU7Hr1G095570.1 , HORVU7Hr1G095570.24 , HORVU7Hr1G095570.25 , HORVU7Hr1G095570.22 , HORVU7Hr1G095570.23 , HORVU7Hr1G095570.20 , HORVU7Hr1G095570.21
Wheat TraesCS7B02G309100 , TraesCS7B02G309100 , TraesCS7B02G309100 , TraesCS7B02G309100 , TraesCS7D02G402500 , TraesCS7A02G409200 , TraesCS7A02G409200 , TraesCS7D02G402500
Populus -


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cDNA sequences
Sobic.008G002500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G040800 expressed protein -
2 Sobic.001G063700 expressed protein -
3 Sobic.001G354600 SAP domain containing protein, expressed K12875: ACIN1, apoptotic chromatin condensation inducer in the nucleus
4 Sobic.003G360400 ulp1 protease family protein, putative, expressed K08596: sentrin-specific protease 7
5 Sobic.009G088000 expressed protein -
6 Sobic.003G188400 glutamate dehydrogenase protein, putative, expressed K00262: E1.4.1.4, glutamate dehydrogenase (NADP+)
7 Sobic.001G522600 PHD-finger domain containing protein, putative, expressed -
8 Sobic.001G433800 lissencephaly type-1-like homology motif, putative, expressed -
9 Sobic.004G332400 neurochondrin family protein, putative, expressed -
10 Sobic.003G294600 Homeobox domain containing protein, expressed -
11 Sobic.005G191900 transporter family protein, putative, expressed -
12 Sobic.006G080400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11851: ubiquitin carboxyl-terminal hydrolase 30
13 Sobic.007G063000 expressed protein -
14 Sobic.004G048800 - K12599: SKI2, antiviral helicase SKI2
15 Sobic.002G425500 ATPOT1, putative, expressed -
16 Sobic.002G154000 EDM2, putative, expressed -
17 Sobic.007G146100 formin, putative, expressed -
18 Sobic.002G133300 ZOS9-20 - C2H2 zinc finger protein, expressed K14400: pre-mRNA cleavage complex 2 protein Pcf11
19 Sobic.010G123600 WW domain containing protein, expressed -
20 Sobic.004G355800 expressed protein -


Gene co-expression network
sample Sobic008G002500 Sobic008G002500 Sobic006G040800 Sobic006G040800 Sobic008G002500--Sobic006G040800 Sobic001G063700 Sobic001G063700 Sobic008G002500--Sobic001G063700 Sobic001G354600 Sobic001G354600 Sobic008G002500--Sobic001G354600 Sobic003G360400 Sobic003G360400 Sobic008G002500--Sobic003G360400 Sobic009G088000 Sobic009G088000 Sobic008G002500--Sobic009G088000 Sobic003G188400 Sobic003G188400 Sobic008G002500--Sobic003G188400 Sobic001G522600 Sobic001G522600 Sobic008G002500--Sobic001G522600 Sobic001G433800 Sobic001G433800 Sobic008G002500--Sobic001G433800 Sobic004G332400 Sobic004G332400 Sobic008G002500--Sobic004G332400 Sobic006G040800--Sobic008G002500 Sobic006G040800--Sobic001G063700 Sobic006G040800--Sobic004G332400 Sobic006G040800--Sobic009G088000 Sobic006G040800--Sobic003G360400 Sobic008G164600 Sobic008G164600 Sobic006G040800--Sobic008G164600 Sobic006G040800--Sobic001G354600 Sobic006G040800--Sobic001G433800 Sobic007G225100 Sobic007G225100 Sobic006G040800--Sobic007G225100 Sobic001G461400 Sobic001G461400 Sobic001G063700--Sobic001G461400 Sobic001G063700--Sobic003G360400 Sobic010G112100 Sobic010G112100 Sobic001G063700--Sobic010G112100 Sobic002G154000 Sobic002G154000 Sobic001G063700--Sobic002G154000 Sobic001G063700--Sobic003G188400 Sobic001G063700--Sobic001G433800 Sobic009G256300 Sobic009G256300 Sobic001G063700--Sobic009G256300 Sobic001G063700--Sobic008G002500 Sobic001G063700--Sobic001G354600 Sobic001G354600--Sobic003G360400 Sobic001G354600--Sobic010G112100 Sobic001G354600--Sobic001G433800 Sobic004G048800 Sobic004G048800 Sobic001G354600--Sobic004G048800 Sobic007G105100 Sobic007G105100 Sobic001G354600--Sobic007G105100 Sobic002G133300 Sobic002G133300 Sobic001G354600--Sobic002G133300 Sobic001G354600--Sobic001G063700 Sobic002G068100 Sobic002G068100 Sobic001G354600--Sobic002G068100 Sobic009G044800 Sobic009G044800 Sobic001G354600--Sobic009G044800 Sobic003G360400--Sobic010G112100 Sobic003G360400--Sobic002G154000 Sobic003G360400--Sobic001G354600 Sobic003G360400--Sobic001G433800 Sobic003G389200 Sobic003G389200 Sobic003G360400--Sobic003G389200 Sobic003G360400--Sobic009G044800 Sobic005G112300 Sobic005G112300 Sobic003G360400--Sobic005G112300 Sobic007G063000 Sobic007G063000 Sobic003G360400--Sobic007G063000 Sobic003G360400--Sobic009G256300 Sobic009G088000--Sobic008G002500 Sobic009G088000--Sobic006G040800 Sobic002G126300 Sobic002G126300 Sobic009G088000--Sobic002G126300 Sobic003G294600 Sobic003G294600 Sobic009G088000--Sobic003G294600 Sobic003G164200 Sobic003G164200 Sobic009G088000--Sobic003G164200 Sobic005G200900 Sobic005G200900 Sobic009G088000--Sobic005G200900 Sobic002G137200 Sobic002G137200 Sobic009G088000--Sobic002G137200 Sobic004G355800 Sobic004G355800 Sobic009G088000--Sobic004G355800 Sobic010G236400 Sobic010G236400 Sobic009G088000--Sobic010G236400 Sobic003G188400--Sobic001G433800 Sobic003G188400--Sobic001G063700 Sobic003G188400--Sobic003G360400 Sobic003G188400--Sobic002G133300 Sobic003G095900 Sobic003G095900 Sobic003G188400--Sobic003G095900 Sobic002G317200 Sobic002G317200 Sobic003G188400--Sobic002G317200 Sobic007G159900 Sobic007G159900 Sobic003G188400--Sobic007G159900 Sobic003G188400--Sobic010G112100 Sobic001G311500 Sobic001G311500 Sobic003G188400--Sobic001G311500 Sobic007G061000 Sobic007G061000 Sobic001G522600--Sobic007G061000 Sobic001G392300 Sobic001G392300 Sobic001G522600--Sobic001G392300 Sobic001G522600--Sobic008G002500 Sobic001G522600--Sobic010G236400 Sobic009G095100 Sobic009G095100 Sobic001G522600--Sobic009G095100 Sobic008G014500 Sobic008G014500 Sobic001G522600--Sobic008G014500 Sobic006G200700 Sobic006G200700 Sobic001G522600--Sobic006G200700 Sobic001G522600--Sobic009G044800 Sobic007G183900 Sobic007G183900 Sobic001G522600--Sobic007G183900 Sobic001G433800--Sobic010G112100 Sobic001G433800--Sobic003G360400 Sobic001G433800--Sobic007G063000 Sobic001G433800--Sobic005G112300 Sobic004G242400 Sobic004G242400 Sobic001G433800--Sobic004G242400 Sobic001G433800--Sobic002G133300 Sobic001G363500 Sobic001G363500 Sobic001G433800--Sobic001G363500 Sobic006G252900 Sobic006G252900 Sobic001G433800--Sobic006G252900 Sobic006G041600 Sobic006G041600 Sobic001G433800--Sobic006G041600 Sobic004G332400--Sobic006G040800 Sobic004G332400--Sobic008G002500 Sobic004G321700 Sobic004G321700 Sobic004G332400--Sobic004G321700 Sobic009G143800 Sobic009G143800 Sobic004G332400--Sobic009G143800 Sobic004G332400--Sobic003G188400 Sobic002G425500 Sobic002G425500 Sobic004G332400--Sobic002G425500 Sobic001G346900 Sobic001G346900 Sobic004G332400--Sobic001G346900 Sobic008G147200 Sobic008G147200 Sobic004G332400--Sobic008G147200 Sobic004G040200 Sobic004G040200 Sobic004G332400--Sobic004G040200
Octagon: transcription factors


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