Gene annotation
Transcriptome id Sobic.001G063700.3,Sobic.001G063700.1,Sobic.001G063700.2
Synonym Sb01g005790
Functional annotation expressed protein
UniProt C5WY53 , A0A1Z5S4I5 , A0A1Z5S4I9
Pfam -
Panther DB PTHR33416 PTHR33416:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G10650 : -
RAP-DB (Rice) LOC_Os03g57430.1 : expressed protein
MaizeGDB (Corn) Zm00025a008486
Brachypodium KQK12838
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G461400 pre-mRNA-processing factor 39, putative, expressed K13217: PRPF39, pre-mRNA-processing factor 39
2 Sobic.003G360400 ulp1 protease family protein, putative, expressed K08596: sentrin-specific protease 7
3 Sobic.010G112100 transcription factor jumonji, putative, expressed K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
4 Sobic.002G154000 EDM2, putative, expressed -
5 Sobic.003G188400 glutamate dehydrogenase protein, putative, expressed K00262: E1.4.1.4, glutamate dehydrogenase (NADP+)
6 Sobic.001G433800 lissencephaly type-1-like homology motif, putative, expressed -
7 Sobic.009G256300 DNA binding protein, putative, expressed -
8 Sobic.008G002500 RCD1, putative, expressed -
9 Sobic.001G354600 SAP domain containing protein, expressed K12875: ACIN1, apoptotic chromatin condensation inducer in the nucleus
10 Sobic.001G400500 calpain, putative, expressed -
11 Sobic.003G416700 homeobox domain containing protein, expressed -
12 Sobic.006G040800 expressed protein -
13 Sobic.004G048800 - K12599: SKI2, antiviral helicase SKI2
14 Sobic.005G112300 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
15 Sobic.002G133300 ZOS9-20 - C2H2 zinc finger protein, expressed K14400: pre-mRNA cleavage complex 2 protein Pcf11
16 Sobic.003G408600 GYF domain containing protein, putative, expressed K18730: PERQ amino acid-rich with GYF domain-containing protein
17 Sobic.001G542400 CCR4-Not complex component, Not1domain containing protein, expressed K12604: CNOT1, CCR4-NOT transcription complex subunit 1
18 Sobic.010G001100 chromo domain containing protein, expressed -
19 Sobic.005G008800 WD domain and HEAT domain containing protein, putative, expressed K07204: regulatory associated protein of mTOR
20 Sobic.007G183900 ubiquitin family protein, putative, expressed -


Gene co-expression network
sample Sobic001G063700 Sobic001G063700 Sobic001G461400 Sobic001G461400 Sobic001G063700--Sobic001G461400 Sobic003G360400 Sobic003G360400 Sobic001G063700--Sobic003G360400 Sobic010G112100 Sobic010G112100 Sobic001G063700--Sobic010G112100 Sobic002G154000 Sobic002G154000 Sobic001G063700--Sobic002G154000 Sobic003G188400 Sobic003G188400 Sobic001G063700--Sobic003G188400 Sobic001G433800 Sobic001G433800 Sobic001G063700--Sobic001G433800 Sobic009G256300 Sobic009G256300 Sobic001G063700--Sobic009G256300 Sobic008G002500 Sobic008G002500 Sobic001G063700--Sobic008G002500 Sobic001G354600 Sobic001G354600 Sobic001G063700--Sobic001G354600 Sobic001G461400--Sobic001G063700 Sobic003G416700 Sobic003G416700 Sobic001G461400--Sobic003G416700 Sobic002G264200 Sobic002G264200 Sobic001G461400--Sobic002G264200 Sobic001G461400--Sobic002G154000 Sobic001G087600 Sobic001G087600 Sobic001G461400--Sobic001G087600 Sobic005G200800 Sobic005G200800 Sobic001G461400--Sobic005G200800 Sobic001G461400--Sobic003G360400 Sobic002G071500 Sobic002G071500 Sobic001G461400--Sobic002G071500 Sobic001G461400--Sobic010G112100 Sobic003G360400--Sobic010G112100 Sobic003G360400--Sobic002G154000 Sobic003G360400--Sobic001G354600 Sobic003G360400--Sobic001G433800 Sobic003G389200 Sobic003G389200 Sobic003G360400--Sobic003G389200 Sobic009G044800 Sobic009G044800 Sobic003G360400--Sobic009G044800 Sobic005G112300 Sobic005G112300 Sobic003G360400--Sobic005G112300 Sobic007G063000 Sobic007G063000 Sobic003G360400--Sobic007G063000 Sobic003G360400--Sobic009G256300 Sobic010G112100--Sobic003G360400 Sobic010G112100--Sobic005G112300 Sobic010G112100--Sobic009G256300 Sobic003G408600 Sobic003G408600 Sobic010G112100--Sobic003G408600 Sobic010G112100--Sobic001G433800 Sobic001G540400 Sobic001G540400 Sobic010G112100--Sobic001G540400 Sobic007G062800 Sobic007G062800 Sobic010G112100--Sobic007G062800 Sobic004G242400 Sobic004G242400 Sobic010G112100--Sobic004G242400 Sobic010G112100--Sobic003G389200 Sobic002G154000--Sobic003G360400 Sobic002G154000--Sobic003G416700 Sobic002G154000--Sobic010G112100 Sobic002G154000--Sobic001G063700 Sobic010G001100 Sobic010G001100 Sobic002G154000--Sobic010G001100 Sobic002G154000--Sobic001G461400 Sobic002G154000--Sobic001G433800 Sobic004G048800 Sobic004G048800 Sobic002G154000--Sobic004G048800 Sobic002G154000--Sobic007G063000 Sobic003G188400--Sobic001G433800 Sobic003G188400--Sobic001G063700 Sobic003G188400--Sobic003G360400 Sobic002G133300 Sobic002G133300 Sobic003G188400--Sobic002G133300 Sobic003G095900 Sobic003G095900 Sobic003G188400--Sobic003G095900 Sobic002G317200 Sobic002G317200 Sobic003G188400--Sobic002G317200 Sobic007G159900 Sobic007G159900 Sobic003G188400--Sobic007G159900 Sobic003G188400--Sobic010G112100 Sobic001G311500 Sobic001G311500 Sobic003G188400--Sobic001G311500 Sobic001G433800--Sobic010G112100 Sobic001G433800--Sobic003G360400 Sobic001G433800--Sobic007G063000 Sobic001G433800--Sobic005G112300 Sobic001G433800--Sobic004G242400 Sobic001G433800--Sobic002G133300 Sobic001G363500 Sobic001G363500 Sobic001G433800--Sobic001G363500 Sobic006G252900 Sobic006G252900 Sobic001G433800--Sobic006G252900 Sobic006G041600 Sobic006G041600 Sobic001G433800--Sobic006G041600 Sobic009G256300--Sobic010G112100 Sobic009G256300--Sobic003G389200 Sobic009G256300--Sobic004G242400 Sobic010G010700 Sobic010G010700 Sobic009G256300--Sobic010G010700 Sobic010G123600 Sobic010G123600 Sobic009G256300--Sobic010G123600 Sobic009G256300--Sobic003G360400 Sobic009G109200 Sobic009G109200 Sobic009G256300--Sobic009G109200 Sobic004G276400 Sobic004G276400 Sobic009G256300--Sobic004G276400 Sobic001G542400 Sobic001G542400 Sobic009G256300--Sobic001G542400 Sobic006G040800 Sobic006G040800 Sobic008G002500--Sobic006G040800 Sobic008G002500--Sobic001G063700 Sobic008G002500--Sobic001G354600 Sobic008G002500--Sobic003G360400 Sobic009G088000 Sobic009G088000 Sobic008G002500--Sobic009G088000 Sobic008G002500--Sobic003G188400 Sobic001G522600 Sobic001G522600 Sobic008G002500--Sobic001G522600 Sobic008G002500--Sobic001G433800 Sobic004G332400 Sobic004G332400 Sobic008G002500--Sobic004G332400 Sobic001G354600--Sobic003G360400 Sobic001G354600--Sobic010G112100 Sobic001G354600--Sobic001G433800 Sobic001G354600--Sobic004G048800 Sobic007G105100 Sobic007G105100 Sobic001G354600--Sobic007G105100 Sobic001G354600--Sobic002G133300 Sobic001G354600--Sobic001G063700 Sobic002G068100 Sobic002G068100 Sobic001G354600--Sobic002G068100 Sobic001G354600--Sobic009G044800
Octagon: transcription factors


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