Gene annotation
Transcriptome id Sobic.008G080500.1,Sobic.008G080500.3,Sobic.008G080500.2
Synonym Sb08g007640
Functional annotation expressed protein
UniProt A0A1B6PCF7
Pfam PF14309
Panther DB PTHR21726 PTHR21726:SF49
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G53540 : -
RAP-DB (Rice) LOC_Os03g17840.1 : expressed protein
MaizeGDB (Corn) Zm00025a054488
Brachypodium PNT64167 , PNT64169 , PNT64168 , KQJ89391 , KQJ89390 , KQJ89393 , KQJ89392 , PNT64170 , KQJ89387 , PNT64166 , KQJ89388 , KQJ89389
Barley -
Wheat TraesCS4D02G029300 , TraesCS4A02G281200 , TraesCS4B02G031600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G159200 PWWP domain containing protein, expressed -
2 Sobic.010G262100 expressed protein -
3 Sobic.004G355800 expressed protein -
4 Sobic.006G112700 ATPOT1, putative, expressed -
5 Sobic.002G079100 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
6 Sobic.005G200900 SCC3, putative, expressed K06671: STAG1_2, SCC3, cohesin complex subunit SA-1/2
7 Sobic.010G269300 hydrolase, acting on carbon-nitrogen, putative, expressed -
8 Sobic.003G299500 expressed protein -
9 Sobic.002G235900 phosphatidylinositol 3- and 4-kinase family protein, putative, expressed -
10 Sobic.003G016500 histone-lysine N-methyltransferase ATX5, putative, expressed -
11 Sobic.010G051400 zinc finger protein, putative, expressed K04706: E3 SUMO-protein ligase PIAS1
12 Sobic.001G248100 histone acetyltransferase GCN5, putative, expressed K06062: PCAF, KAT2, histone acetyltransferase
13 Sobic.007G047600 expressed protein -
14 Sobic.006G280100 SET domain containing protein, expressed -
15 Sobic.008G092800 expressed protein -
16 Sobic.003G209400 expressed protein -
17 Sobic.003G323300 expressed protein -
18 Sobic.001G367100 pleckstrin homology domain-containing protein, putative, expressed -
19 Sobic.006G210000 zinc finger domain, LSD1 subclass family protein, expressed -
20 Sobic.010G227000 pentatricopeptide, putative, expressed -


Gene co-expression network
sample Sobic008G080500 Sobic008G080500 Sobic007G159200 Sobic007G159200 Sobic008G080500--Sobic007G159200 Sobic010G262100 Sobic010G262100 Sobic008G080500--Sobic010G262100 Sobic004G355800 Sobic004G355800 Sobic008G080500--Sobic004G355800 Sobic006G112700 Sobic006G112700 Sobic008G080500--Sobic006G112700 Sobic002G079100 Sobic002G079100 Sobic008G080500--Sobic002G079100 Sobic005G200900 Sobic005G200900 Sobic008G080500--Sobic005G200900 Sobic010G269300 Sobic010G269300 Sobic008G080500--Sobic010G269300 Sobic003G299500 Sobic003G299500 Sobic008G080500--Sobic003G299500 Sobic002G235900 Sobic002G235900 Sobic008G080500--Sobic002G235900 Sobic007G159200--Sobic008G080500 Sobic001G248100 Sobic001G248100 Sobic007G159200--Sobic001G248100 Sobic006G280100 Sobic006G280100 Sobic007G159200--Sobic006G280100 Sobic010G051400 Sobic010G051400 Sobic007G159200--Sobic010G051400 Sobic007G159200--Sobic004G355800 Sobic002G425200 Sobic002G425200 Sobic007G159200--Sobic002G425200 Sobic007G159200--Sobic010G262100 Sobic001G300000 Sobic001G300000 Sobic007G159200--Sobic001G300000 Sobic009G007700 Sobic009G007700 Sobic007G159200--Sobic009G007700 Sobic001G451300 Sobic001G451300 Sobic010G262100--Sobic001G451300 Sobic010G138900 Sobic010G138900 Sobic010G262100--Sobic010G138900 Sobic010G262100--Sobic001G248100 Sobic010G262100--Sobic008G080500 Sobic002G043100 Sobic002G043100 Sobic010G262100--Sobic002G043100 Sobic002G399800 Sobic002G399800 Sobic010G262100--Sobic002G399800 Sobic002G371600 Sobic002G371600 Sobic010G262100--Sobic002G371600 Sobic003G314700 Sobic003G314700 Sobic010G262100--Sobic003G314700 Sobic008G092800 Sobic008G092800 Sobic010G262100--Sobic008G092800 Sobic004G355800--Sobic005G200900 Sobic006G118700 Sobic006G118700 Sobic004G355800--Sobic006G118700 Sobic006G210000 Sobic006G210000 Sobic004G355800--Sobic006G210000 Sobic002G154000 Sobic002G154000 Sobic004G355800--Sobic002G154000 Sobic004G155600 Sobic004G155600 Sobic004G355800--Sobic004G155600 Sobic005G191900 Sobic005G191900 Sobic004G355800--Sobic005G191900 Sobic006G067600 Sobic006G067600 Sobic004G355800--Sobic006G067600 Sobic004G156500 Sobic004G156500 Sobic004G355800--Sobic004G156500 Sobic008G002500 Sobic008G002500 Sobic004G355800--Sobic008G002500 Sobic006G112700--Sobic008G080500 Sobic003G209400 Sobic003G209400 Sobic006G112700--Sobic003G209400 Sobic001G239800 Sobic001G239800 Sobic006G112700--Sobic001G239800 Sobic006G236000 Sobic006G236000 Sobic006G112700--Sobic006G236000 Sobic009G142000 Sobic009G142000 Sobic006G112700--Sobic009G142000 Sobic006G112700--Sobic010G262100 Sobic003G123100 Sobic003G123100 Sobic006G112700--Sobic003G123100 Sobic006G112700--Sobic008G092800 Sobic006G112700--Sobic001G451300 Sobic003G124600 Sobic003G124600 Sobic002G079100--Sobic003G124600 Sobic001G448100 Sobic001G448100 Sobic002G079100--Sobic001G448100 Sobic008G017100 Sobic008G017100 Sobic002G079100--Sobic008G017100 Sobic002G079100--Sobic008G080500 Sobic002G380100 Sobic002G380100 Sobic002G079100--Sobic002G380100 Sobic002G292800 Sobic002G292800 Sobic002G079100--Sobic002G292800 Sobic010G278600 Sobic010G278600 Sobic002G079100--Sobic010G278600 Sobic006G245900 Sobic006G245900 Sobic002G079100--Sobic006G245900 Sobic001G482200 Sobic001G482200 Sobic002G079100--Sobic001G482200 Sobic005G200900--Sobic004G355800 Sobic005G200900--Sobic002G154000 Sobic003G360400 Sobic003G360400 Sobic005G200900--Sobic003G360400 Sobic009G251500 Sobic009G251500 Sobic005G200900--Sobic009G251500 Sobic009G088000 Sobic009G088000 Sobic005G200900--Sobic009G088000 Sobic005G200900--Sobic006G118700 Sobic005G200900--Sobic006G210000 Sobic005G200900--Sobic004G156500 Sobic005G200900--Sobic008G002500 Sobic007G125700 Sobic007G125700 Sobic010G269300--Sobic007G125700 Sobic002G430900 Sobic002G430900 Sobic010G269300--Sobic002G430900 Sobic002G263700 Sobic002G263700 Sobic010G269300--Sobic002G263700 Sobic001G123600 Sobic001G123600 Sobic010G269300--Sobic001G123600 Sobic003G360300 Sobic003G360300 Sobic010G269300--Sobic003G360300 Sobic010G269300--Sobic008G080500 Sobic010G236200 Sobic010G236200 Sobic010G269300--Sobic010G236200 Sobic010G279900 Sobic010G279900 Sobic010G269300--Sobic010G279900 Sobic009G032200 Sobic009G032200 Sobic010G269300--Sobic009G032200 Sobic007G034200 Sobic007G034200 Sobic003G299500--Sobic007G034200 Sobic003G194800 Sobic003G194800 Sobic003G299500--Sobic003G194800 Sobic004G106250 Sobic004G106250 Sobic003G299500--Sobic004G106250 Sobic009G120400 Sobic009G120400 Sobic003G299500--Sobic009G120400 Sobic003G016500 Sobic003G016500 Sobic003G299500--Sobic003G016500 Sobic003G299500--Sobic001G123600 Sobic003G299500--Sobic006G245900 Sobic003G299500--Sobic002G235900 Sobic006G191200 Sobic006G191200 Sobic003G299500--Sobic006G191200 Sobic004G007900 Sobic004G007900 Sobic002G235900--Sobic004G007900 Sobic002G235900--Sobic003G299500 Sobic002G235900--Sobic008G080500 Sobic002G235900--Sobic002G079100 Sobic002G235900--Sobic001G448100 Sobic009G102000 Sobic009G102000 Sobic002G235900--Sobic009G102000 Sobic002G235900--Sobic004G106250 Sobic009G000400 Sobic009G000400 Sobic002G235900--Sobic009G000400 Sobic002G235900--Sobic003G016500
Octagon: transcription factors


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