Gene annotation
Transcriptome id Sobic.003G299500.4
Synonym
Functional annotation expressed protein
UniProt A0A1W0VZP0
Pfam -
Panther DB PTHR36380 PTHR36380:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G18490 : -
RAP-DB (Rice) LOC_Os01g55094.3 : expressed protein
MaizeGDB (Corn) Zm00025a027531
Brachypodium PNT72875 , KQK09796 , KQK09797 , KQK09794 , KQK09795
Barley HORVU3Hr1G072640.8 , HORVU3Hr1G072640.6 , HORVU3Hr1G072640.7 , HORVU3Hr1G072640.4 , HORVU3Hr1G072640.5 , HORVU3Hr1G072640.2 , HORVU3Hr1G072640.3 , HORVU3Hr1G072640.1 , HORVU3Hr1G072640.14 , HORVU3Hr1G072640.15 , HORVU3Hr1G072640.16 , HORVU3Hr1G072640.17 , HORVU3Hr1G072640.10 , HORVU3Hr1G072640.11 , HORVU3Hr1G072640.12 , HORVU3Hr1G072640.13 , HORVU3Hr1G072640.18
Wheat TraesCS3D02G293100 , TraesCS3D02G293100 , TraesCS3A02G293300 , TraesCS3A02G293300 , TraesCS3A02G293300 , TraesCS3A02G293300 , TraesCS3B02G328100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G034200 expressed protein K10875: RAD54L, DNA repair and recombination protein RAD54 and RAD54-like protein
2 Sobic.003G194800 EF hand family protein, putative, expressed -
3 Sobic.004G106250 - -
4 Sobic.009G120400 methyltransferase, putative, expressed -
5 Sobic.003G016500 histone-lysine N-methyltransferase ATX5, putative, expressed -
6 Sobic.001G123600 domain of unknown function, DUF250 domain containing protein, expressed -
7 Sobic.006G245900 FAR1 family protein, expressed -
8 Sobic.002G235900 phosphatidylinositol 3- and 4-kinase family protein, putative, expressed -
9 Sobic.006G191200 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
10 Sobic.008G080500 expressed protein -
11 Sobic.010G269300 hydrolase, acting on carbon-nitrogen, putative, expressed -
12 Sobic.002G079100 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
13 Sobic.003G135500 sugar transporter superfamily, putative, expressed -
14 Sobic.003G124600 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12813: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
15 Sobic.009G102000 OsFBX9 - F-box domain containing protein, expressed -
16 Sobic.010G143600 ATP-binding region, ATPase-like domain containing protein, expressed -
17 Sobic.002G381900 expressed protein -
18 Sobic.004G007900 SNF2 family N-terminal domain containing protein, expressed K11643: CHD4, chromodomain-helicase-DNA-binding protein 4
19 Sobic.008G092800 expressed protein -
20 Sobic.010G227000 pentatricopeptide, putative, expressed -


Gene co-expression network
sample Sobic003G299500 Sobic003G299500 Sobic007G034200 Sobic007G034200 Sobic003G299500--Sobic007G034200 Sobic003G194800 Sobic003G194800 Sobic003G299500--Sobic003G194800 Sobic004G106250 Sobic004G106250 Sobic003G299500--Sobic004G106250 Sobic009G120400 Sobic009G120400 Sobic003G299500--Sobic009G120400 Sobic003G016500 Sobic003G016500 Sobic003G299500--Sobic003G016500 Sobic001G123600 Sobic001G123600 Sobic003G299500--Sobic001G123600 Sobic006G245900 Sobic006G245900 Sobic003G299500--Sobic006G245900 Sobic002G235900 Sobic002G235900 Sobic003G299500--Sobic002G235900 Sobic006G191200 Sobic006G191200 Sobic003G299500--Sobic006G191200 Sobic007G034200--Sobic003G299500 Sobic007G034200--Sobic009G120400 Sobic001G051400 Sobic001G051400 Sobic007G034200--Sobic001G051400 Sobic007G034200--Sobic001G123600 Sobic007G034200--Sobic003G194800 Sobic002G386900 Sobic002G386900 Sobic007G034200--Sobic002G386900 Sobic007G034200--Sobic006G191200 Sobic003G113300 Sobic003G113300 Sobic007G034200--Sobic003G113300 Sobic006G170900 Sobic006G170900 Sobic007G034200--Sobic006G170900 Sobic008G085950 Sobic008G085950 Sobic003G194800--Sobic008G085950 Sobic008G047500 Sobic008G047500 Sobic003G194800--Sobic008G047500 Sobic003G194800--Sobic009G120400 Sobic003G204100 Sobic003G204100 Sobic003G194800--Sobic003G204100 Sobic002G173400 Sobic002G173400 Sobic003G194800--Sobic002G173400 Sobic003G194800--Sobic003G299500 Sobic007G105700 Sobic007G105700 Sobic003G194800--Sobic007G105700 Sobic004G215600 Sobic004G215600 Sobic003G194800--Sobic004G215600 Sobic003G420400 Sobic003G420400 Sobic003G194800--Sobic003G420400 Sobic004G106250--Sobic003G299500 Sobic004G106250--Sobic003G016500 Sobic004G106250--Sobic006G245900 Sobic002G292800 Sobic002G292800 Sobic004G106250--Sobic002G292800 Sobic004G106250--Sobic006G170900 Sobic004G106250--Sobic002G235900 Sobic004G106250--Sobic006G191200 Sobic009G102000 Sobic009G102000 Sobic004G106250--Sobic009G102000 Sobic004G106250--Sobic007G034200 Sobic009G120400--Sobic002G173400 Sobic002G426100 Sobic002G426100 Sobic009G120400--Sobic002G426100 Sobic009G120400--Sobic007G034200 Sobic009G120400--Sobic003G194800 Sobic009G120400--Sobic004G215600 Sobic009G120400--Sobic007G105700 Sobic009G120400--Sobic003G299500 Sobic007G186400 Sobic007G186400 Sobic009G120400--Sobic007G186400 Sobic009G120400--Sobic001G051400 Sobic010G070600 Sobic010G070600 Sobic003G016500--Sobic010G070600 Sobic003G016500--Sobic003G299500 Sobic008G092800 Sobic008G092800 Sobic003G016500--Sobic008G092800 Sobic008G080500 Sobic008G080500 Sobic003G016500--Sobic008G080500 Sobic002G119600 Sobic002G119600 Sobic003G016500--Sobic002G119600 Sobic003G016500--Sobic007G034200 Sobic003G124600 Sobic003G124600 Sobic003G016500--Sobic003G124600 Sobic003G016500--Sobic004G106250 Sobic008G140700 Sobic008G140700 Sobic003G016500--Sobic008G140700 Sobic001G123600--Sobic006G191200 Sobic001G229300 Sobic001G229300 Sobic001G123600--Sobic001G229300 Sobic003G360300 Sobic003G360300 Sobic001G123600--Sobic003G360300 Sobic001G123600--Sobic007G034200 Sobic001G123600--Sobic002G386900 Sobic010G269300 Sobic010G269300 Sobic001G123600--Sobic010G269300 Sobic001G123600--Sobic009G120400 Sobic001G123600--Sobic003G299500 Sobic003G010900 Sobic003G010900 Sobic001G123600--Sobic003G010900 Sobic002G371600 Sobic002G371600 Sobic006G245900--Sobic002G371600 Sobic002G296400 Sobic002G296400 Sobic006G245900--Sobic002G296400 Sobic004G031300 Sobic004G031300 Sobic006G245900--Sobic004G031300 Sobic007G016900 Sobic007G016900 Sobic006G245900--Sobic007G016900 Sobic006G245900--Sobic002G292800 Sobic007G145400 Sobic007G145400 Sobic006G245900--Sobic007G145400 Sobic002G252100 Sobic002G252100 Sobic006G245900--Sobic002G252100 Sobic003G308500 Sobic003G308500 Sobic006G245900--Sobic003G308500 Sobic001G346900 Sobic001G346900 Sobic006G245900--Sobic001G346900 Sobic004G007900 Sobic004G007900 Sobic002G235900--Sobic004G007900 Sobic002G235900--Sobic003G299500 Sobic002G235900--Sobic008G080500 Sobic002G079100 Sobic002G079100 Sobic002G235900--Sobic002G079100 Sobic001G448100 Sobic001G448100 Sobic002G235900--Sobic001G448100 Sobic002G235900--Sobic009G102000 Sobic002G235900--Sobic004G106250 Sobic009G000400 Sobic009G000400 Sobic002G235900--Sobic009G000400 Sobic002G235900--Sobic003G016500 Sobic006G191200--Sobic001G123600 Sobic006G191200--Sobic002G296400 Sobic006G191200--Sobic001G051400 Sobic002G078100 Sobic002G078100 Sobic006G191200--Sobic002G078100 Sobic002G066800 Sobic002G066800 Sobic006G191200--Sobic002G066800 Sobic006G191200--Sobic003G299500 Sobic006G191200--Sobic002G386900 Sobic006G191200--Sobic009G120400 Sobic004G097900 Sobic004G097900 Sobic006G191200--Sobic004G097900
Octagon: transcription factors


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