Gene annotation
Transcriptome id Sobic.004G106250.1
Synonym -
Functional annotation -
UniProt A0A1Z5RLS7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G299500 expressed protein -
2 Sobic.003G016500 histone-lysine N-methyltransferase ATX5, putative, expressed -
3 Sobic.006G245900 FAR1 family protein, expressed -
4 Sobic.002G292800 MORN repeat domain containing protein, expressed -
5 Sobic.006G170900 growth regulator related protein, putative, expressed -
6 Sobic.002G235900 phosphatidylinositol 3- and 4-kinase family protein, putative, expressed -
7 Sobic.006G191200 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
8 Sobic.009G102000 OsFBX9 - F-box domain containing protein, expressed -
9 Sobic.007G034200 expressed protein K10875: RAD54L, DNA repair and recombination protein RAD54 and RAD54-like protein
10 Sobic.003G194800 EF hand family protein, putative, expressed -
11 Sobic.004G097900 expressed protein -
12 Sobic.004G122900 gamma-secretase subunit APH-1B, putative, expressed -
13 Sobic.010G070600 DNA binding protein, putative, expressed -
14 Sobic.001G495400 PPR repeat domain containing protein, putative, expressed -
15 Sobic.006G224100 expressed protein -
16 Sobic.002G386900 pseudouridylate synthase, putative, expressed K06176: truD, tRNA pseudouridine13 synthase
17 Sobic.003G124600 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12813: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
18 Sobic.002G364900 PPR repeat domain containing protein, putative, expressed -
19 Sobic.003G420400 - -
20 Sobic.003G113300 expressed protein -


Gene co-expression network
sample Sobic004G106250 Sobic004G106250 Sobic003G299500 Sobic003G299500 Sobic004G106250--Sobic003G299500 Sobic003G016500 Sobic003G016500 Sobic004G106250--Sobic003G016500 Sobic006G245900 Sobic006G245900 Sobic004G106250--Sobic006G245900 Sobic002G292800 Sobic002G292800 Sobic004G106250--Sobic002G292800 Sobic006G170900 Sobic006G170900 Sobic004G106250--Sobic006G170900 Sobic002G235900 Sobic002G235900 Sobic004G106250--Sobic002G235900 Sobic006G191200 Sobic006G191200 Sobic004G106250--Sobic006G191200 Sobic009G102000 Sobic009G102000 Sobic004G106250--Sobic009G102000 Sobic007G034200 Sobic007G034200 Sobic004G106250--Sobic007G034200 Sobic003G299500--Sobic007G034200 Sobic003G194800 Sobic003G194800 Sobic003G299500--Sobic003G194800 Sobic003G299500--Sobic004G106250 Sobic009G120400 Sobic009G120400 Sobic003G299500--Sobic009G120400 Sobic003G299500--Sobic003G016500 Sobic001G123600 Sobic001G123600 Sobic003G299500--Sobic001G123600 Sobic003G299500--Sobic006G245900 Sobic003G299500--Sobic002G235900 Sobic003G299500--Sobic006G191200 Sobic010G070600 Sobic010G070600 Sobic003G016500--Sobic010G070600 Sobic003G016500--Sobic003G299500 Sobic008G092800 Sobic008G092800 Sobic003G016500--Sobic008G092800 Sobic008G080500 Sobic008G080500 Sobic003G016500--Sobic008G080500 Sobic002G119600 Sobic002G119600 Sobic003G016500--Sobic002G119600 Sobic003G016500--Sobic007G034200 Sobic003G124600 Sobic003G124600 Sobic003G016500--Sobic003G124600 Sobic003G016500--Sobic004G106250 Sobic008G140700 Sobic008G140700 Sobic003G016500--Sobic008G140700 Sobic002G371600 Sobic002G371600 Sobic006G245900--Sobic002G371600 Sobic002G296400 Sobic002G296400 Sobic006G245900--Sobic002G296400 Sobic004G031300 Sobic004G031300 Sobic006G245900--Sobic004G031300 Sobic007G016900 Sobic007G016900 Sobic006G245900--Sobic007G016900 Sobic006G245900--Sobic002G292800 Sobic007G145400 Sobic007G145400 Sobic006G245900--Sobic007G145400 Sobic002G252100 Sobic002G252100 Sobic006G245900--Sobic002G252100 Sobic003G308500 Sobic003G308500 Sobic006G245900--Sobic003G308500 Sobic001G346900 Sobic001G346900 Sobic006G245900--Sobic001G346900 Sobic004G097900 Sobic004G097900 Sobic002G292800--Sobic004G097900 Sobic002G292800--Sobic006G245900 Sobic002G079100 Sobic002G079100 Sobic002G292800--Sobic002G079100 Sobic002G386900 Sobic002G386900 Sobic002G292800--Sobic002G386900 Sobic002G292800--Sobic006G191200 Sobic002G063900 Sobic002G063900 Sobic002G292800--Sobic002G063900 Sobic002G292800--Sobic003G124600 Sobic002G292800--Sobic006G170900 Sobic001G495400 Sobic001G495400 Sobic002G292800--Sobic001G495400 Sobic005G123400 Sobic005G123400 Sobic006G170900--Sobic005G123400 Sobic006G170900--Sobic003G124600 Sobic003G113300 Sobic003G113300 Sobic006G170900--Sobic003G113300 Sobic006G170900--Sobic007G034200 Sobic006G103700 Sobic006G103700 Sobic006G170900--Sobic006G103700 Sobic006G170900--Sobic002G292800 Sobic006G170900--Sobic003G194800 Sobic006G170900--Sobic004G106250 Sobic006G237500 Sobic006G237500 Sobic006G170900--Sobic006G237500 Sobic004G007900 Sobic004G007900 Sobic002G235900--Sobic004G007900 Sobic002G235900--Sobic003G299500 Sobic002G235900--Sobic008G080500 Sobic002G235900--Sobic002G079100 Sobic001G448100 Sobic001G448100 Sobic002G235900--Sobic001G448100 Sobic002G235900--Sobic009G102000 Sobic002G235900--Sobic004G106250 Sobic009G000400 Sobic009G000400 Sobic002G235900--Sobic009G000400 Sobic002G235900--Sobic003G016500 Sobic006G191200--Sobic001G123600 Sobic006G191200--Sobic002G296400 Sobic001G051400 Sobic001G051400 Sobic006G191200--Sobic001G051400 Sobic002G078100 Sobic002G078100 Sobic006G191200--Sobic002G078100 Sobic002G066800 Sobic002G066800 Sobic006G191200--Sobic002G066800 Sobic006G191200--Sobic003G299500 Sobic006G191200--Sobic002G386900 Sobic006G191200--Sobic009G120400 Sobic006G191200--Sobic004G097900 Sobic008G149800 Sobic008G149800 Sobic009G102000--Sobic008G149800 Sobic002G317400 Sobic002G317400 Sobic009G102000--Sobic002G317400 Sobic009G040800 Sobic009G040800 Sobic009G102000--Sobic009G040800 Sobic004G122900 Sobic004G122900 Sobic009G102000--Sobic004G122900 Sobic002G147100 Sobic002G147100 Sobic009G102000--Sobic002G147100 Sobic009G102000--Sobic002G063900 Sobic009G129600 Sobic009G129600 Sobic009G102000--Sobic009G129600 Sobic007G147400 Sobic007G147400 Sobic009G102000--Sobic007G147400 Sobic009G102000--Sobic003G299500 Sobic007G034200--Sobic003G299500 Sobic007G034200--Sobic009G120400 Sobic007G034200--Sobic001G051400 Sobic007G034200--Sobic001G123600 Sobic007G034200--Sobic003G194800 Sobic007G034200--Sobic002G386900 Sobic007G034200--Sobic006G191200 Sobic007G034200--Sobic003G113300 Sobic007G034200--Sobic006G170900
Octagon: transcription factors


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