Gene annotation
Transcriptome id Sobic.002G292800.1
Synonym ARC3, Sb02g032380
Functional annotation MORN repeat domain containing protein, expressed
UniProt A0A1W0W6A3
Pfam PF02493
Panther DB PTHR23084 PTHR23084:SF119
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G75010 : GTP binding
RAP-DB (Rice) LOC_Os09g38330.1 : MORN repeat domain containing protein, expressed
MaizeGDB (Corn) Zm00025a047931
Brachypodium KQJ91413 , KQJ91412 , KQJ91411 , KQJ91410 , KQJ91414 , PNT65115 , PNT65114 , PNT65113 , KQJ91409
Barley HORVU5Hr1G088120.18 , HORVU5Hr1G088120.19 , HORVU5Hr1G088120.12 , HORVU5Hr1G088120.13 , HORVU5Hr1G088120.10 , HORVU5Hr1G088120.11 , HORVU5Hr1G088120.16 , HORVU5Hr1G088120.17 , HORVU5Hr1G088120.14 , HORVU5Hr1G088120.15 , HORVU5Hr1G088120.1 , HORVU5Hr1G088120.2 , HORVU5Hr1G088120.3 , HORVU5Hr1G088120.4 , HORVU5Hr1G088120.5 , HORVU5Hr1G088120.6 , HORVU5Hr1G088120.7 , HORVU5Hr1G088120.8 , HORVU5Hr1G088120.9 , HORVU5Hr1G088120.60 , HORVU5Hr1G088120.41 , HORVU5Hr1G088120.40 , HORVU5Hr1G088120.43 , HORVU5Hr1G088120.42 , HORVU5Hr1G088120.45 , HORVU5Hr1G088120.44 , HORVU5Hr1G088120.47 , HORVU5Hr1G088120.46 , HORVU5Hr1G088120.49 , HORVU5Hr1G088120.48 , HORVU5Hr1G088120.31 , HORVU5Hr1G088120.56 , HORVU5Hr1G088120.57 , HORVU5Hr1G088120.54 , HORVU5Hr1G088120.55 , HORVU5Hr1G088120.53 , HORVU5Hr1G088120.50 , HORVU5Hr1G088120.58 , HORVU5Hr1G088120.59 , HORVU5Hr1G088120.23 , HORVU5Hr1G088120.22 , HORVU5Hr1G088120.21 , HORVU5Hr1G088120.20 , HORVU5Hr1G088120.27 , HORVU5Hr1G088120.26 , HORVU5Hr1G088120.25 , HORVU5Hr1G088120.24 , HORVU5Hr1G088120.29 , HORVU5Hr1G088120.28 , HORVU5Hr1G088120.30 , HORVU5Hr1G088120.32 , HORVU5Hr1G088120.33 , HORVU5Hr1G088120.34 , HORVU5Hr1G088120.35 , HORVU5Hr1G088120.36 , HORVU5Hr1G088120.37 , HORVU5Hr1G088120.38 , HORVU5Hr1G088120.39
Wheat TraesCS5B02G358700 , TraesCS5A02G356200 , TraesCS5D02G365000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G097900 expressed protein -
2 Sobic.006G245900 FAR1 family protein, expressed -
3 Sobic.002G079100 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
4 Sobic.002G386900 pseudouridylate synthase, putative, expressed K06176: truD, tRNA pseudouridine13 synthase
5 Sobic.006G191200 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
6 Sobic.002G063900 zinc ion binding protein, putative, expressed -
7 Sobic.003G124600 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12813: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
8 Sobic.006G170900 growth regulator related protein, putative, expressed -
9 Sobic.001G495400 PPR repeat domain containing protein, putative, expressed -
10 Sobic.003G113300 expressed protein -
11 Sobic.003G413100 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed -
12 Sobic.004G106250 - -
13 Sobic.004G357100 expressed protein -
14 Sobic.004G122900 gamma-secretase subunit APH-1B, putative, expressed -
15 Sobic.002G356200 GCN5-related N-acetyltransferase, putative, expressed K14682: amino-acid N-acetyltransferase
16 Sobic.001G308400 expressed protein -
17 Sobic.002G227500 protein transport protein, putative, expressed K14006: protein transport protein SEC23
18 Sobic.007G016900 OsFBL26 - F-box domain and LRR containing protein, expressed -
19 Sobic.002G263300 - -
20 Sobic.009G260650 - -


Gene co-expression network
sample Sobic002G292800 Sobic002G292800 Sobic004G097900 Sobic004G097900 Sobic002G292800--Sobic004G097900 Sobic006G245900 Sobic006G245900 Sobic002G292800--Sobic006G245900 Sobic002G079100 Sobic002G079100 Sobic002G292800--Sobic002G079100 Sobic002G386900 Sobic002G386900 Sobic002G292800--Sobic002G386900 Sobic006G191200 Sobic006G191200 Sobic002G292800--Sobic006G191200 Sobic002G063900 Sobic002G063900 Sobic002G292800--Sobic002G063900 Sobic003G124600 Sobic003G124600 Sobic002G292800--Sobic003G124600 Sobic006G170900 Sobic006G170900 Sobic002G292800--Sobic006G170900 Sobic001G495400 Sobic001G495400 Sobic002G292800--Sobic001G495400 Sobic004G097900--Sobic002G292800 Sobic004G097900--Sobic002G386900 Sobic004G097900--Sobic006G191200 Sobic004G097900--Sobic001G495400 Sobic006G029100 Sobic006G029100 Sobic004G097900--Sobic006G029100 Sobic002G112600 Sobic002G112600 Sobic004G097900--Sobic002G112600 Sobic003G218200 Sobic003G218200 Sobic004G097900--Sobic003G218200 Sobic004G097900--Sobic006G170900 Sobic004G106250 Sobic004G106250 Sobic004G097900--Sobic004G106250 Sobic002G371600 Sobic002G371600 Sobic006G245900--Sobic002G371600 Sobic002G296400 Sobic002G296400 Sobic006G245900--Sobic002G296400 Sobic004G031300 Sobic004G031300 Sobic006G245900--Sobic004G031300 Sobic007G016900 Sobic007G016900 Sobic006G245900--Sobic007G016900 Sobic006G245900--Sobic002G292800 Sobic007G145400 Sobic007G145400 Sobic006G245900--Sobic007G145400 Sobic002G252100 Sobic002G252100 Sobic006G245900--Sobic002G252100 Sobic003G308500 Sobic003G308500 Sobic006G245900--Sobic003G308500 Sobic001G346900 Sobic001G346900 Sobic006G245900--Sobic001G346900 Sobic002G079100--Sobic003G124600 Sobic001G448100 Sobic001G448100 Sobic002G079100--Sobic001G448100 Sobic008G017100 Sobic008G017100 Sobic002G079100--Sobic008G017100 Sobic008G080500 Sobic008G080500 Sobic002G079100--Sobic008G080500 Sobic002G380100 Sobic002G380100 Sobic002G079100--Sobic002G380100 Sobic002G079100--Sobic002G292800 Sobic010G278600 Sobic010G278600 Sobic002G079100--Sobic010G278600 Sobic002G079100--Sobic006G245900 Sobic001G482200 Sobic001G482200 Sobic002G079100--Sobic001G482200 Sobic002G386600 Sobic002G386600 Sobic002G386900--Sobic002G386600 Sobic002G386900--Sobic004G097900 Sobic001G123600 Sobic001G123600 Sobic002G386900--Sobic001G123600 Sobic002G386900--Sobic006G191200 Sobic007G034200 Sobic007G034200 Sobic002G386900--Sobic007G034200 Sobic001G051400 Sobic001G051400 Sobic002G386900--Sobic001G051400 Sobic001G200200 Sobic001G200200 Sobic002G386900--Sobic001G200200 Sobic002G239601 Sobic002G239601 Sobic002G386900--Sobic002G239601 Sobic002G386900--Sobic002G292800 Sobic006G191200--Sobic001G123600 Sobic006G191200--Sobic002G296400 Sobic006G191200--Sobic001G051400 Sobic002G078100 Sobic002G078100 Sobic006G191200--Sobic002G078100 Sobic002G066800 Sobic002G066800 Sobic006G191200--Sobic002G066800 Sobic003G299500 Sobic003G299500 Sobic006G191200--Sobic003G299500 Sobic006G191200--Sobic002G386900 Sobic009G120400 Sobic009G120400 Sobic006G191200--Sobic009G120400 Sobic006G191200--Sobic004G097900 Sobic008G173100 Sobic008G173100 Sobic002G063900--Sobic008G173100 Sobic006G116100 Sobic006G116100 Sobic002G063900--Sobic006G116100 Sobic004G357100 Sobic004G357100 Sobic002G063900--Sobic004G357100 Sobic002G260400 Sobic002G260400 Sobic002G063900--Sobic002G260400 Sobic007G090430 Sobic007G090430 Sobic002G063900--Sobic007G090430 Sobic004G246100 Sobic004G246100 Sobic002G063900--Sobic004G246100 Sobic002G278000 Sobic002G278000 Sobic002G063900--Sobic002G278000 Sobic008G149800 Sobic008G149800 Sobic002G063900--Sobic008G149800 SobicK028600 SobicK028600 Sobic002G063900--SobicK028600 Sobic003G124600--Sobic002G079100 Sobic003G124600--Sobic006G170900 Sobic003G124600--Sobic002G292800 Sobic003G016500 Sobic003G016500 Sobic003G124600--Sobic003G016500 Sobic003G124600--Sobic003G299500 Sobic003G124600--Sobic007G034200 Sobic009G102000 Sobic009G102000 Sobic003G124600--Sobic009G102000 Sobic003G113300 Sobic003G113300 Sobic003G124600--Sobic003G113300 Sobic001G424600 Sobic001G424600 Sobic003G124600--Sobic001G424600 Sobic005G123400 Sobic005G123400 Sobic006G170900--Sobic005G123400 Sobic006G170900--Sobic003G124600 Sobic006G170900--Sobic003G113300 Sobic006G170900--Sobic007G034200 Sobic006G103700 Sobic006G103700 Sobic006G170900--Sobic006G103700 Sobic006G170900--Sobic002G292800 Sobic003G194800 Sobic003G194800 Sobic006G170900--Sobic003G194800 Sobic006G170900--Sobic004G106250 Sobic006G237500 Sobic006G237500 Sobic006G170900--Sobic006G237500 Sobic001G495400--Sobic004G097900 Sobic001G495400--Sobic002G386900 Sobic001G495400--Sobic002G292800 Sobic001G032200 Sobic001G032200 Sobic001G495400--Sobic001G032200 Sobic001G495400--Sobic006G170900 Sobic002G122100 Sobic002G122100 Sobic001G495400--Sobic002G122100 Sobic001G495400--Sobic004G106250 Sobic001G417500 Sobic001G417500 Sobic001G495400--Sobic001G417500 Sobic001G495400--Sobic003G124600
Octagon: transcription factors


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