Gene annotation
Transcriptome id Sobic.007G016900.1
Synonym Sb07g001470
Functional annotation OsFBL26 - F-box domain and LRR containing protein, expressed
UniProt C5YM11
Pfam PF08387
Panther DB PTHR32212 PTHR32212:SF86
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G44060 : F-box/RNI-like superfamily protein
RAP-DB (Rice) LOC_Os05g49980.1 : OsFBL26 - F-box domain and LRR containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS5A02G514300 , TraesCS4D02G340400 , TraesCS1D02G172900 , TraesCS1D02G172900 , TraesCS5D02G295200 , TraesCS4D02G340300 , TraesCS5B02G274700
Populus -


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cDNA sequences
Sobic.007G016900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G245900 FAR1 family protein, expressed -
2 Sobic.007G187600 pentatricopeptide, putative, expressed -
3 Sobic.003G413100 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed -
4 Sobic.003G010900 expressed protein -
5 Sobic.004G345400 WD domain, G-beta repeat domain containing protein, expressed K05757: actin related protein 2/3 complex, subunit 1A/1B
6 Sobic.001G042200 ATP/GTP/Ca++ binding protein, putative, expressed K07870: RHOT1, mitochondrial Rho GTPase 1
7 Sobic.002G343200 homeodomain-like, putative, expressed -
8 Sobic.003G113300 expressed protein -
9 Sobic.009G040800 helicase, putative, expressed K10844: ERCC2, DNA excision repair protein ERCC-2
10 Sobic.004G084400 methyltransferase domain containing protein, expressed K14850: ribosomal RNA-processing protein 8
11 Sobic.001G004100 WD domain, G-beta repeat domain containing protein, expressed -
12 Sobic.001G051400 aminoacyl-tRNA synthetase, putative, expressed -
13 Sobic.001G340300 tentative name(PubMedID : 31536532)@expressed protein -
14 Sobic.010G278600 FG-GAP repeat-containing protein, putative, expressed -
15 Sobic.004G031300 PPR repeat domain containing protein, putative, expressed -
16 Sobic.010G077500 protein of unknown function DUF1296 domain containing protein, expressed -
17 Sobic.003G393200 expressed protein -
18 Sobic.002G381900 expressed protein -
19 Sobic.001G013300 SWIM zinc finger family protein, putative, expressed -
20 Sobic.002G063900 zinc ion binding protein, putative, expressed -


Gene co-expression network
sample Sobic007G016900 Sobic007G016900 Sobic006G245900 Sobic006G245900 Sobic007G016900--Sobic006G245900 Sobic007G187600 Sobic007G187600 Sobic007G016900--Sobic007G187600 Sobic003G413100 Sobic003G413100 Sobic007G016900--Sobic003G413100 Sobic003G010900 Sobic003G010900 Sobic007G016900--Sobic003G010900 Sobic004G345400 Sobic004G345400 Sobic007G016900--Sobic004G345400 Sobic001G042200 Sobic001G042200 Sobic007G016900--Sobic001G042200 Sobic002G343200 Sobic002G343200 Sobic007G016900--Sobic002G343200 Sobic003G113300 Sobic003G113300 Sobic007G016900--Sobic003G113300 Sobic009G040800 Sobic009G040800 Sobic007G016900--Sobic009G040800 Sobic002G371600 Sobic002G371600 Sobic006G245900--Sobic002G371600 Sobic002G296400 Sobic002G296400 Sobic006G245900--Sobic002G296400 Sobic004G031300 Sobic004G031300 Sobic006G245900--Sobic004G031300 Sobic006G245900--Sobic007G016900 Sobic002G292800 Sobic002G292800 Sobic006G245900--Sobic002G292800 Sobic007G145400 Sobic007G145400 Sobic006G245900--Sobic007G145400 Sobic002G252100 Sobic002G252100 Sobic006G245900--Sobic002G252100 Sobic003G308500 Sobic003G308500 Sobic006G245900--Sobic003G308500 Sobic001G346900 Sobic001G346900 Sobic006G245900--Sobic001G346900 Sobic007G187600--Sobic001G042200 Sobic010G266500 Sobic010G266500 Sobic007G187600--Sobic010G266500 Sobic001G168900 Sobic001G168900 Sobic007G187600--Sobic001G168900 Sobic010G077500 Sobic010G077500 Sobic007G187600--Sobic010G077500 Sobic001G023800 Sobic001G023800 Sobic007G187600--Sobic001G023800 Sobic008G173100 Sobic008G173100 Sobic007G187600--Sobic008G173100 Sobic007G187600--Sobic001G346900 Sobic001G004100 Sobic001G004100 Sobic007G187600--Sobic001G004100 Sobic003G416700 Sobic003G416700 Sobic007G187600--Sobic003G416700 Sobic001G155400 Sobic001G155400 Sobic003G413100--Sobic001G155400 Sobic003G413100--Sobic007G016900 Sobic010G096000 Sobic010G096000 Sobic003G413100--Sobic010G096000 Sobic001G373400 Sobic001G373400 Sobic003G413100--Sobic001G373400 Sobic003G413100--Sobic002G292800 Sobic003G413100--Sobic006G245900 Sobic003G413100--Sobic004G345400 Sobic003G413100--Sobic009G040800 Sobic003G413100--Sobic001G042200 Sobic001G051400 Sobic001G051400 Sobic003G010900--Sobic001G051400 Sobic004G145600 Sobic004G145600 Sobic003G010900--Sobic004G145600 Sobic002G066800 Sobic002G066800 Sobic003G010900--Sobic002G066800 Sobic003G010900--Sobic007G016900 Sobic001G123600 Sobic001G123600 Sobic003G010900--Sobic001G123600 Sobic004G084400 Sobic004G084400 Sobic003G010900--Sobic004G084400 Sobic001G229300 Sobic001G229300 Sobic003G010900--Sobic001G229300 Sobic003G432800 Sobic003G432800 Sobic003G010900--Sobic003G432800 Sobic002G381900 Sobic002G381900 Sobic003G010900--Sobic002G381900 Sobic004G345400--Sobic001G042200 Sobic004G345400--Sobic010G077500 Sobic009G249700 Sobic009G249700 Sobic004G345400--Sobic009G249700 Sobic007G042900 Sobic007G042900 Sobic004G345400--Sobic007G042900 Sobic004G180900 Sobic004G180900 Sobic004G345400--Sobic004G180900 Sobic006G186400 Sobic006G186400 Sobic004G345400--Sobic006G186400 Sobic004G084500 Sobic004G084500 Sobic004G345400--Sobic004G084500 Sobic007G056500 Sobic007G056500 Sobic004G345400--Sobic007G056500 Sobic003G394200 Sobic003G394200 Sobic004G345400--Sobic003G394200 Sobic001G042200--Sobic010G077500 Sobic001G042200--Sobic004G345400 Sobic001G042200--Sobic007G187600 Sobic008G058800 Sobic008G058800 Sobic001G042200--Sobic008G058800 Sobic001G042200--Sobic007G056500 Sobic003G212900 Sobic003G212900 Sobic001G042200--Sobic003G212900 Sobic001G042200--Sobic007G042900 Sobic001G042200--Sobic009G249700 Sobic006G281700 Sobic006G281700 Sobic001G042200--Sobic006G281700 Sobic003G297700 Sobic003G297700 Sobic002G343200--Sobic003G297700 Sobic002G343200--Sobic007G016900 Sobic006G282200 Sobic006G282200 Sobic002G343200--Sobic006G282200 Sobic002G386900 Sobic002G386900 Sobic002G343200--Sobic002G386900 Sobic003G304400 Sobic003G304400 Sobic002G343200--Sobic003G304400 Sobic003G052800 Sobic003G052800 Sobic002G343200--Sobic003G052800 Sobic002G343200--Sobic001G051400 Sobic005G133800 Sobic005G133800 Sobic002G343200--Sobic005G133800 Sobic002G220200 Sobic002G220200 Sobic002G343200--Sobic002G220200 Sobic009G122500 Sobic009G122500 Sobic003G113300--Sobic009G122500 Sobic003G113300--Sobic002G296400 Sobic002G014800 Sobic002G014800 Sobic003G113300--Sobic002G014800 Sobic001G474400 Sobic001G474400 Sobic003G113300--Sobic001G474400 Sobic001G030000 Sobic001G030000 Sobic003G113300--Sobic001G030000 Sobic005G114500 Sobic005G114500 Sobic003G113300--Sobic005G114500 Sobic007G030100 Sobic007G030100 Sobic003G113300--Sobic007G030100 Sobic003G393200 Sobic003G393200 Sobic003G113300--Sobic003G393200 Sobic003G113300--Sobic001G051400 Sobic010G278600 Sobic010G278600 Sobic009G040800--Sobic010G278600 Sobic006G091000 Sobic006G091000 Sobic009G040800--Sobic006G091000 Sobic005G040900 Sobic005G040900 Sobic009G040800--Sobic005G040900 Sobic009G129600 Sobic009G129600 Sobic009G040800--Sobic009G129600 Sobic001G335900 Sobic001G335900 Sobic009G040800--Sobic001G335900 Sobic008G149800 Sobic008G149800 Sobic009G040800--Sobic008G149800 Sobic004G246100 Sobic004G246100 Sobic009G040800--Sobic004G246100 Sobic009G040800--Sobic001G042200 Sobic004G353400 Sobic004G353400 Sobic009G040800--Sobic004G353400
Octagon: transcription factors


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