Gene annotation
Transcriptome id Sobic.001G340300.2,Sobic.001G340300.1
Synonym SbNF-YA2, Nuclear Factor Y
Functional annotation tentative name (PubMedID : 31536532)
expressed protein
UniProt A0A1B6QMM6 , A0A1B6QMM2
Pfam -
Panther DB PTHR12758 PTHR12758:SF24
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G13990 : Kinase-related protein of unknown function (DUF1296)
RAP-DB (Rice) LOC_Os03g29750.1 : expressed protein
MaizeGDB (Corn) Zm00025a002829
Brachypodium KQK21307 , KQK21306
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G340300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G228000 ubiquitin-conjugating enzyme domain containing protein, expressed K10581: ubiquitin-conjugating enzyme E2 O
2 Sobic.003G043000 expressed protein -
3 Sobic.009G194000 Alg9-like mannosyltransferase protein, putative, expressed K05286: GPI mannosyltransferase 3
4 Sobic.003G181700 GPI mannosyltransferase 2, putative, expressed K07542: GPI mannosyltransferase 2
5 Sobic.001G042200 ATP/GTP/Ca++ binding protein, putative, expressed K07870: RHOT1, mitochondrial Rho GTPase 1
6 Sobic.009G166600 nucleoside-triphosphatase, putative, expressed -
7 Sobic.010G077500 protein of unknown function DUF1296 domain containing protein, expressed -
8 Sobic.003G363700 OsFBL5 - F-box domain and LRR containing protein, expressed -
9 Sobic.009G107300 3\'-5\' exonuclease, putative, expressed -
10 Sobic.006G210700 potassium transporter, putative, expressed -
11 Sobic.003G012000 GTPase of unknown function domain containing protein, putative, expressed -
12 Sobic.007G042900 BSD domain-containing protein, putative, expressed K03141: TFIIH1, GTF2H1, transcription initiation factor TFIIH subunit 1
13 Sobic.003G212900 zinc ion binding protein, putative, expressed -
14 Sobic.001G035200 ThiF family domain containing protein, putative, expressed K04532: NAE1, amyloid beta precursor protein binding protein 1
15 Sobic.007G016900 OsFBL26 - F-box domain and LRR containing protein, expressed -
16 Sobic.002G356200 GCN5-related N-acetyltransferase, putative, expressed K14682: amino-acid N-acetyltransferase
17 Sobic.009G249700 expressed protein -
18 Sobic.002G063900 zinc ion binding protein, putative, expressed -
19 Sobic.003G021600 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K13117: ATP-dependent RNA helicase DDX35
20 Sobic.002G076500 protein Kinase-associated protein phosphatase, putative, expressed K01090: protein phosphatase


Gene co-expression network
sample Sobic001G340300 Sobic001G340300 Sobic009G228000 Sobic009G228000 Sobic001G340300--Sobic009G228000 Sobic003G043000 Sobic003G043000 Sobic001G340300--Sobic003G043000 Sobic009G194000 Sobic009G194000 Sobic001G340300--Sobic009G194000 Sobic003G181700 Sobic003G181700 Sobic001G340300--Sobic003G181700 Sobic001G042200 Sobic001G042200 Sobic001G340300--Sobic001G042200 Sobic009G166600 Sobic009G166600 Sobic001G340300--Sobic009G166600 Sobic010G077500 Sobic010G077500 Sobic001G340300--Sobic010G077500 Sobic003G363700 Sobic003G363700 Sobic001G340300--Sobic003G363700 Sobic009G107300 Sobic009G107300 Sobic001G340300--Sobic009G107300 Sobic009G228000--Sobic009G107300 Sobic009G228000--Sobic003G043000 Sobic004G240400 Sobic004G240400 Sobic009G228000--Sobic004G240400 Sobic003G241700 Sobic003G241700 Sobic009G228000--Sobic003G241700 Sobic009G228000--Sobic003G363700 Sobic002G063900 Sobic002G063900 Sobic009G228000--Sobic002G063900 Sobic003G297500 Sobic003G297500 Sobic009G228000--Sobic003G297500 Sobic004G209700 Sobic004G209700 Sobic009G228000--Sobic004G209700 Sobic006G234700 Sobic006G234700 Sobic009G228000--Sobic006G234700 Sobic004G265500 Sobic004G265500 Sobic003G043000--Sobic004G265500 Sobic001G308400 Sobic001G308400 Sobic003G043000--Sobic001G308400 Sobic003G296900 Sobic003G296900 Sobic003G043000--Sobic003G296900 Sobic004G357100 Sobic004G357100 Sobic003G043000--Sobic004G357100 Sobic003G043000--Sobic003G241700 Sobic003G043000--Sobic009G228000 SobicK028600 SobicK028600 Sobic003G043000--SobicK028600 Sobic003G163200 Sobic003G163200 Sobic003G043000--Sobic003G163200 Sobic002G227500 Sobic002G227500 Sobic003G043000--Sobic002G227500 Sobic009G194000--Sobic003G181700 Sobic003G021600 Sobic003G021600 Sobic009G194000--Sobic003G021600 Sobic001G490900 Sobic001G490900 Sobic009G194000--Sobic001G490900 Sobic010G169900 Sobic010G169900 Sobic009G194000--Sobic010G169900 Sobic004G122900 Sobic004G122900 Sobic009G194000--Sobic004G122900 Sobic009G194000--Sobic001G308400 Sobic003G190200 Sobic003G190200 Sobic009G194000--Sobic003G190200 Sobic006G060000 Sobic006G060000 Sobic009G194000--Sobic006G060000 Sobic001G141400 Sobic001G141400 Sobic009G194000--Sobic001G141400 Sobic003G181700--Sobic009G194000 Sobic003G181700--Sobic003G021600 Sobic003G181700--Sobic004G122900 Sobic003G181700--Sobic001G490900 Sobic003G181700--Sobic010G169900 Sobic003G181700--Sobic002G227500 Sobic003G181700--Sobic006G060000 Sobic009G122500 Sobic009G122500 Sobic003G181700--Sobic009G122500 Sobic007G172700 Sobic007G172700 Sobic003G181700--Sobic007G172700 Sobic001G042200--Sobic010G077500 Sobic004G345400 Sobic004G345400 Sobic001G042200--Sobic004G345400 Sobic007G187600 Sobic007G187600 Sobic001G042200--Sobic007G187600 Sobic008G058800 Sobic008G058800 Sobic001G042200--Sobic008G058800 Sobic007G056500 Sobic007G056500 Sobic001G042200--Sobic007G056500 Sobic003G212900 Sobic003G212900 Sobic001G042200--Sobic003G212900 Sobic007G042900 Sobic007G042900 Sobic001G042200--Sobic007G042900 Sobic009G249700 Sobic009G249700 Sobic001G042200--Sobic009G249700 Sobic006G281700 Sobic006G281700 Sobic001G042200--Sobic006G281700 Sobic002G313900 Sobic002G313900 Sobic009G166600--Sobic002G313900 Sobic005G114800 Sobic005G114800 Sobic009G166600--Sobic005G114800 Sobic006G210700 Sobic006G210700 Sobic009G166600--Sobic006G210700 Sobic005G197100 Sobic005G197100 Sobic009G166600--Sobic005G197100 Sobic009G166600--Sobic009G249700 Sobic008G021000 Sobic008G021000 Sobic009G166600--Sobic008G021000 Sobic003G394200 Sobic003G394200 Sobic009G166600--Sobic003G394200 Sobic002G292900 Sobic002G292900 Sobic009G166600--Sobic002G292900 Sobic006G128100 Sobic006G128100 Sobic009G166600--Sobic006G128100 Sobic010G077500--Sobic001G042200 Sobic006G049100 Sobic006G049100 Sobic010G077500--Sobic006G049100 Sobic010G077500--Sobic004G345400 Sobic010G077500--Sobic007G187600 Sobic010G077500--Sobic003G212900 Sobic010G077500--Sobic008G058800 Sobic010G077500--Sobic007G056500 Sobic010G077500--Sobic002G063900 Sobic009G129600 Sobic009G129600 Sobic010G077500--Sobic009G129600 Sobic003G379200 Sobic003G379200 Sobic003G363700--Sobic003G379200 Sobic001G237600 Sobic001G237600 Sobic003G363700--Sobic001G237600 Sobic003G363700--Sobic004G265500 Sobic002G371700 Sobic002G371700 Sobic003G363700--Sobic002G371700 Sobic003G363700--Sobic009G228000 Sobic002G374300 Sobic002G374300 Sobic003G363700--Sobic002G374300 Sobic003G363700--Sobic003G043000 Sobic010G000800 Sobic010G000800 Sobic003G363700--Sobic010G000800 Sobic003G182300 Sobic003G182300 Sobic003G363700--Sobic003G182300 Sobic009G107300--Sobic009G228000 Sobic007G087000 Sobic007G087000 Sobic009G107300--Sobic007G087000 Sobic009G107300--Sobic004G240400 Sobic008G116700 Sobic008G116700 Sobic009G107300--Sobic008G116700 Sobic009G107300--Sobic003G043000 Sobic004G198600 Sobic004G198600 Sobic009G107300--Sobic004G198600 Sobic003G120300 Sobic003G120300 Sobic009G107300--Sobic003G120300 Sobic009G107300--Sobic003G181700 Sobic001G156900 Sobic001G156900 Sobic009G107300--Sobic001G156900
Octagon: transcription factors


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