Gene annotation
Transcriptome id Sobic.010G077500.1
Synonym Sb10g006740
Functional annotation protein of unknown function DUF1296 domain containing protein, expressed
UniProt Q8W0T8 , C5Z6C7
Pfam PF06972
Panther DB PTHR12758 PTHR12758:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G13990 : Kinase-related protein of unknown function (DUF1296)
RAP-DB (Rice) LOC_Os06g10430.3 : protein of unknown function DUF1296 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a049620 , Zm00025a023505 , Zm00025a042468 , Zm00025a025198
Brachypodium KQK19096 , KQK19097 , KQK19098
Barley HORVU7Hr1G034850.2 , HORVU7Hr1G034850.1 , HORVU7Hr1G034850.3 , HORVU7Hr1G034850.5 , HORVU7Hr1G034850.4 , HORVU7Hr1G034850.6
Wheat TraesCS7A02G166800 , TraesCS7B02G071400 , TraesCS7B02G071400 , TraesCS7B02G071400 , TraesCS7B02G071400 , TraesCS7B02G071400 , TraesCS7D02G167400 , TraesCS7D02G167400 , TraesCS7D02G167400 , TraesCS7D02G167400 , TraesCS7D02G167400 , TraesCS7A02G166800 , TraesCS7A02G166800 , TraesCS7A02G166800 , TraesCS7A02G166800 , TraesCS7A02G166800 , TraesCS7A02G166800 , TraesCS7A02G166800 , TraesCS7A02G166800
Populus -


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cDNA sequences
Sobic.010G077500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G042200 ATP/GTP/Ca++ binding protein, putative, expressed K07870: RHOT1, mitochondrial Rho GTPase 1
2 Sobic.006G049100 expressed protein -
3 Sobic.004G345400 WD domain, G-beta repeat domain containing protein, expressed K05757: actin related protein 2/3 complex, subunit 1A/1B
4 Sobic.007G187600 pentatricopeptide, putative, expressed -
5 Sobic.003G212900 zinc ion binding protein, putative, expressed -
6 Sobic.008G058800 OsFBX369 - F-box domain containing protein, expressed -
7 Sobic.007G056500 cullin, putative, expressed K03869: cullin 3
8 Sobic.002G063900 zinc ion binding protein, putative, expressed -
9 Sobic.009G129600 ABTB1 - Armadillo repeats with a Bric-a-Brac, Tramtrack, Broad Complex BTB domain, expressed -
10 Sobic.003G416700 homeobox domain containing protein, expressed -
11 Sobic.004G180900 PSP domain containing protein, expressed K13128: zinc finger CCHC domain-containing protein 8
12 Sobic.009G228000 ubiquitin-conjugating enzyme domain containing protein, expressed K10581: ubiquitin-conjugating enzyme E2 O
13 Sobic.006G161000 CAMK_KIN1/SNF1/Nim1_like.18 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07359: calcium/calmodulin-dependent protein kinase kinase 2
14 Sobic.009G017200 transporter family protein, putative, expressed K15276: SLC35B2, solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2
15 Sobic.002G165800 - -
16 Sobic.003G363700 OsFBL5 - F-box domain and LRR containing protein, expressed -
17 Sobic.002G234600 ZOS9-15 - C2H2 zinc finger protein, expressed -
18 Sobic.001G066300 cell cycle control protein, putative, expressed -
19 Sobic.001G135500 HECT-domain domain containing protein, expressed K10588: ubiquitin-protein ligase E3 B
20 Sobic.009G249700 expressed protein -


Gene co-expression network
sample Sobic010G077500 Sobic010G077500 Sobic001G042200 Sobic001G042200 Sobic010G077500--Sobic001G042200 Sobic006G049100 Sobic006G049100 Sobic010G077500--Sobic006G049100 Sobic004G345400 Sobic004G345400 Sobic010G077500--Sobic004G345400 Sobic007G187600 Sobic007G187600 Sobic010G077500--Sobic007G187600 Sobic003G212900 Sobic003G212900 Sobic010G077500--Sobic003G212900 Sobic008G058800 Sobic008G058800 Sobic010G077500--Sobic008G058800 Sobic007G056500 Sobic007G056500 Sobic010G077500--Sobic007G056500 Sobic002G063900 Sobic002G063900 Sobic010G077500--Sobic002G063900 Sobic009G129600 Sobic009G129600 Sobic010G077500--Sobic009G129600 Sobic001G042200--Sobic010G077500 Sobic001G042200--Sobic004G345400 Sobic001G042200--Sobic007G187600 Sobic001G042200--Sobic008G058800 Sobic001G042200--Sobic007G056500 Sobic001G042200--Sobic003G212900 Sobic007G042900 Sobic007G042900 Sobic001G042200--Sobic007G042900 Sobic009G249700 Sobic009G249700 Sobic001G042200--Sobic009G249700 Sobic006G281700 Sobic006G281700 Sobic001G042200--Sobic006G281700 Sobic006G049100--Sobic010G077500 Sobic006G049100--Sobic001G042200 Sobic001G487100 Sobic001G487100 Sobic006G049100--Sobic001G487100 Sobic006G049100--Sobic007G056500 Sobic001G168900 Sobic001G168900 Sobic006G049100--Sobic001G168900 Sobic006G049100--Sobic004G345400 Sobic006G049100--Sobic007G187600 Sobic003G132000 Sobic003G132000 Sobic006G049100--Sobic003G132000 Sobic001G395100 Sobic001G395100 Sobic006G049100--Sobic001G395100 Sobic004G345400--Sobic001G042200 Sobic004G345400--Sobic010G077500 Sobic004G345400--Sobic009G249700 Sobic004G345400--Sobic007G042900 Sobic004G180900 Sobic004G180900 Sobic004G345400--Sobic004G180900 Sobic006G186400 Sobic006G186400 Sobic004G345400--Sobic006G186400 Sobic004G084500 Sobic004G084500 Sobic004G345400--Sobic004G084500 Sobic004G345400--Sobic007G056500 Sobic003G394200 Sobic003G394200 Sobic004G345400--Sobic003G394200 Sobic007G187600--Sobic001G042200 Sobic010G266500 Sobic010G266500 Sobic007G187600--Sobic010G266500 Sobic007G187600--Sobic001G168900 Sobic007G187600--Sobic010G077500 Sobic001G023800 Sobic001G023800 Sobic007G187600--Sobic001G023800 Sobic008G173100 Sobic008G173100 Sobic007G187600--Sobic008G173100 Sobic001G346900 Sobic001G346900 Sobic007G187600--Sobic001G346900 Sobic001G004100 Sobic001G004100 Sobic007G187600--Sobic001G004100 Sobic003G416700 Sobic003G416700 Sobic007G187600--Sobic003G416700 Sobic001G135500 Sobic001G135500 Sobic003G212900--Sobic001G135500 Sobic003G212900--Sobic010G077500 Sobic002G422100 Sobic002G422100 Sobic003G212900--Sobic002G422100 Sobic003G212900--Sobic003G416700 Sobic003G212900--Sobic001G042200 Sobic004G309900 Sobic004G309900 Sobic003G212900--Sobic004G309900 Sobic006G224800 Sobic006G224800 Sobic003G212900--Sobic006G224800 Sobic003G212900--Sobic008G058800 Sobic002G295500 Sobic002G295500 Sobic003G212900--Sobic002G295500 Sobic008G058800--Sobic001G042200 Sobic008G058800--Sobic009G129600 Sobic006G248500 Sobic006G248500 Sobic008G058800--Sobic006G248500 Sobic003G205501 Sobic003G205501 Sobic008G058800--Sobic003G205501 Sobic008G058800--Sobic010G077500 Sobic002G264200 Sobic002G264200 Sobic008G058800--Sobic002G264200 Sobic007G026000 Sobic007G026000 Sobic008G058800--Sobic007G026000 Sobic008G127400 Sobic008G127400 Sobic008G058800--Sobic008G127400 Sobic008G058800--Sobic004G180900 Sobic007G056500--Sobic006G186400 Sobic002G034600 Sobic002G034600 Sobic007G056500--Sobic002G034600 Sobic007G056500--Sobic001G042200 Sobic007G056500--Sobic010G077500 Sobic010G095700 Sobic010G095700 Sobic007G056500--Sobic010G095700 Sobic007G056500--Sobic004G180900 Sobic007G056500--Sobic001G395100 Sobic001G066300 Sobic001G066300 Sobic007G056500--Sobic001G066300 Sobic006G121300 Sobic006G121300 Sobic007G056500--Sobic006G121300 Sobic002G063900--Sobic008G173100 Sobic006G116100 Sobic006G116100 Sobic002G063900--Sobic006G116100 Sobic004G357100 Sobic004G357100 Sobic002G063900--Sobic004G357100 Sobic002G260400 Sobic002G260400 Sobic002G063900--Sobic002G260400 Sobic007G090430 Sobic007G090430 Sobic002G063900--Sobic007G090430 Sobic004G246100 Sobic004G246100 Sobic002G063900--Sobic004G246100 Sobic002G278000 Sobic002G278000 Sobic002G063900--Sobic002G278000 Sobic008G149800 Sobic008G149800 Sobic002G063900--Sobic008G149800 SobicK028600 SobicK028600 Sobic002G063900--SobicK028600 Sobic009G129600--Sobic008G058800 Sobic009G129600--Sobic010G077500 Sobic001G346700 Sobic001G346700 Sobic009G129600--Sobic001G346700 Sobic009G129600--Sobic006G248500 Sobic009G040800 Sobic009G040800 Sobic009G129600--Sobic009G040800 Sobic009G129600--Sobic002G063900 Sobic008G100100 Sobic008G100100 Sobic009G129600--Sobic008G100100 Sobic002G357100 Sobic002G357100 Sobic009G129600--Sobic002G357100 Sobic002G148400 Sobic002G148400 Sobic009G129600--Sobic002G148400
Octagon: transcription factors


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