Gene annotation
Transcriptome id Sobic.009G129600.1
Synonym ARIA, Sb09g019610
Functional annotation ABTB1 - Armadillo repeats with a Bric-a-Brac, Tramtrack, Broad Complex BTB domain, expressed
UniProt C5YXL9
Pfam PF00651 PF00514
Panther DB PTHR23315 PTHR23315:SF84
NCBI CDD KOG0166; Karyopherin (importin) alpha
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G19330 : ARM repeat protein interacting with ABF2
RAP-DB (Rice) LOC_Os05g33050.1 : ABTB1 - Armadillo repeats with a Bric-a-Brac, Tramtrack, Broad Complex BTB domain, expressed
MaizeGDB (Corn) Zm00025a043620 , Zm00025a037511
Brachypodium KQK06379
Barley HORVU1Hr1G062160.10 , HORVU1Hr1G062160.11 , HORVU1Hr1G062160.4 , HORVU1Hr1G062160.5 , HORVU1Hr1G062160.6 , HORVU1Hr1G062160.7 , HORVU1Hr1G062160.1 , HORVU1Hr1G062160.2 , HORVU1Hr1G062160.3 , HORVU1Hr1G062160.8 , HORVU1Hr1G062160.9
Wheat TraesCS1B02G260100 , TraesCS1B02G260100 , TraesCS1D02G248900 , TraesCS1D02G248900 , TraesCS1A02G249400 , TraesCS1A02G249400 , TraesCS1A02G249400 , TraesCS1A02G249400 , TraesCS1A02G249400
Populus -


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cDNA sequences
Sobic.009G129600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G058800 OsFBX369 - F-box domain containing protein, expressed -
2 Sobic.010G077500 protein of unknown function DUF1296 domain containing protein, expressed -
3 Sobic.001G346700 Ser/Thr protein phosphatase family protein, putative, expressed -
4 Sobic.006G248500 expressed protein -
5 Sobic.009G040800 helicase, putative, expressed K10844: ERCC2, DNA excision repair protein ERCC-2
6 Sobic.002G063900 zinc ion binding protein, putative, expressed -
7 Sobic.008G100100 MYB family transcription factor, putative, expressed K12860: CDC5L, CDC5, pre-mRNA-splicing factor CDC5/CEF1
8 Sobic.002G357100 SUMO-activating enzyme subunit 2, putative, expressed K10685: UBLE1B, SAE2, ubiquitin-like 1-activating enzyme E1 B
9 Sobic.002G148400 histone-lysine N-methyltransferase, H3 lysine-4 specific ATX1, putative, expressed -
10 Sobic.004G156500 expressed protein -
11 Sobic.004G347100 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
12 Sobic.006G046700 vacuolar protein sorting-associated protein 11, putative, expressed -
13 Sobic.010G279900 PHD-finger domain containing protein, expressed -
14 Sobic.007G139400 OsFBL33 - F-box domain and LRR containing protein, expressed -
15 Sobic.007G188900 AP2 domain containing protein, expressed -
16 Sobic.009G260650 - -
17 Sobic.009G151200 expressed protein -
18 Sobic.002G234600 ZOS9-15 - C2H2 zinc finger protein, expressed -
19 Sobic.006G244300 expressed protein -
20 Sobic.003G354100 expressed protein -


Gene co-expression network
sample Sobic009G129600 Sobic009G129600 Sobic008G058800 Sobic008G058800 Sobic009G129600--Sobic008G058800 Sobic010G077500 Sobic010G077500 Sobic009G129600--Sobic010G077500 Sobic001G346700 Sobic001G346700 Sobic009G129600--Sobic001G346700 Sobic006G248500 Sobic006G248500 Sobic009G129600--Sobic006G248500 Sobic009G040800 Sobic009G040800 Sobic009G129600--Sobic009G040800 Sobic002G063900 Sobic002G063900 Sobic009G129600--Sobic002G063900 Sobic008G100100 Sobic008G100100 Sobic009G129600--Sobic008G100100 Sobic002G357100 Sobic002G357100 Sobic009G129600--Sobic002G357100 Sobic002G148400 Sobic002G148400 Sobic009G129600--Sobic002G148400 Sobic001G042200 Sobic001G042200 Sobic008G058800--Sobic001G042200 Sobic008G058800--Sobic009G129600 Sobic008G058800--Sobic006G248500 Sobic003G205501 Sobic003G205501 Sobic008G058800--Sobic003G205501 Sobic008G058800--Sobic010G077500 Sobic002G264200 Sobic002G264200 Sobic008G058800--Sobic002G264200 Sobic007G026000 Sobic007G026000 Sobic008G058800--Sobic007G026000 Sobic008G127400 Sobic008G127400 Sobic008G058800--Sobic008G127400 Sobic004G180900 Sobic004G180900 Sobic008G058800--Sobic004G180900 Sobic010G077500--Sobic001G042200 Sobic006G049100 Sobic006G049100 Sobic010G077500--Sobic006G049100 Sobic004G345400 Sobic004G345400 Sobic010G077500--Sobic004G345400 Sobic007G187600 Sobic007G187600 Sobic010G077500--Sobic007G187600 Sobic003G212900 Sobic003G212900 Sobic010G077500--Sobic003G212900 Sobic010G077500--Sobic008G058800 Sobic007G056500 Sobic007G056500 Sobic010G077500--Sobic007G056500 Sobic010G077500--Sobic002G063900 Sobic010G077500--Sobic009G129600 Sobic001G346700--Sobic009G129600 Sobic004G347100 Sobic004G347100 Sobic001G346700--Sobic004G347100 Sobic003G415100 Sobic003G415100 Sobic001G346700--Sobic003G415100 Sobic003G354100 Sobic003G354100 Sobic001G346700--Sobic003G354100 Sobic007G188900 Sobic007G188900 Sobic001G346700--Sobic007G188900 Sobic001G346700--Sobic002G148400 Sobic007G139400 Sobic007G139400 Sobic001G346700--Sobic007G139400 Sobic002G268900 Sobic002G268900 Sobic001G346700--Sobic002G268900 Sobic002G334600 Sobic002G334600 Sobic001G346700--Sobic002G334600 Sobic001G469800 Sobic001G469800 Sobic006G248500--Sobic001G469800 Sobic002G259800 Sobic002G259800 Sobic006G248500--Sobic002G259800 Sobic003G433500 Sobic003G433500 Sobic006G248500--Sobic003G433500 Sobic009G151200 Sobic009G151200 Sobic006G248500--Sobic009G151200 Sobic006G248500--Sobic008G058800 Sobic004G013600 Sobic004G013600 Sobic006G248500--Sobic004G013600 Sobic006G248500--Sobic007G026000 Sobic006G248500--Sobic004G347100 Sobic009G044900 Sobic009G044900 Sobic006G248500--Sobic009G044900 Sobic010G278600 Sobic010G278600 Sobic009G040800--Sobic010G278600 Sobic006G091000 Sobic006G091000 Sobic009G040800--Sobic006G091000 Sobic005G040900 Sobic005G040900 Sobic009G040800--Sobic005G040900 Sobic009G040800--Sobic009G129600 Sobic001G335900 Sobic001G335900 Sobic009G040800--Sobic001G335900 Sobic008G149800 Sobic008G149800 Sobic009G040800--Sobic008G149800 Sobic004G246100 Sobic004G246100 Sobic009G040800--Sobic004G246100 Sobic009G040800--Sobic001G042200 Sobic004G353400 Sobic004G353400 Sobic009G040800--Sobic004G353400 Sobic008G173100 Sobic008G173100 Sobic002G063900--Sobic008G173100 Sobic006G116100 Sobic006G116100 Sobic002G063900--Sobic006G116100 Sobic004G357100 Sobic004G357100 Sobic002G063900--Sobic004G357100 Sobic002G260400 Sobic002G260400 Sobic002G063900--Sobic002G260400 Sobic007G090430 Sobic007G090430 Sobic002G063900--Sobic007G090430 Sobic002G063900--Sobic004G246100 Sobic002G278000 Sobic002G278000 Sobic002G063900--Sobic002G278000 Sobic002G063900--Sobic008G149800 SobicK028600 SobicK028600 Sobic002G063900--SobicK028600 Sobic004G156500 Sobic004G156500 Sobic008G100100--Sobic004G156500 Sobic001G306900 Sobic001G306900 Sobic008G100100--Sobic001G306900 Sobic006G032400 Sobic006G032400 Sobic008G100100--Sobic006G032400 Sobic005G015900 Sobic005G015900 Sobic008G100100--Sobic005G015900 Sobic006G210000 Sobic006G210000 Sobic008G100100--Sobic006G210000 Sobic007G031600 Sobic007G031600 Sobic008G100100--Sobic007G031600 Sobic010G065300 Sobic010G065300 Sobic008G100100--Sobic010G065300 Sobic003G241200 Sobic003G241200 Sobic008G100100--Sobic003G241200 Sobic010G096000 Sobic010G096000 Sobic008G100100--Sobic010G096000 Sobic002G357100--Sobic004G156500 Sobic006G067600 Sobic006G067600 Sobic002G357100--Sobic006G067600 Sobic002G357100--Sobic006G210000 Sobic002G357100--Sobic009G129600 Sobic007G183300 Sobic007G183300 Sobic002G357100--Sobic007G183300 Sobic007G091600 Sobic007G091600 Sobic002G357100--Sobic007G091600 Sobic002G357100--Sobic009G151200 Sobic002G357100--Sobic008G100100 Sobic004G129300 Sobic004G129300 Sobic002G357100--Sobic004G129300 Sobic004G049700 Sobic004G049700 Sobic002G148400--Sobic004G049700 Sobic002G148400--Sobic009G129600 Sobic008G057000 Sobic008G057000 Sobic002G148400--Sobic008G057000 Sobic001G484200 Sobic001G484200 Sobic002G148400--Sobic001G484200 Sobic001G134300 Sobic001G134300 Sobic002G148400--Sobic001G134300 Sobic002G148400--Sobic004G156500 Sobic002G148400--Sobic002G357100 Sobic004G086200 Sobic004G086200 Sobic002G148400--Sobic004G086200 Sobic002G148400--Sobic001G346700
Octagon: transcription factors


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