Gene annotation
Transcriptome id Sobic.010G279900.1
Synonym Sb10g031300
Functional annotation PHD-finger domain containing protein, expressed
UniProt A0A194YLZ1
Pfam PF00628 PF16135
Panther DB PTHR24098 PTHR24098:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G27980 : Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain
RAP-DB (Rice) LOC_Os06g51450.1 : PHD-finger domain containing protein, expressed
MaizeGDB (Corn) Zm00025a018612
Brachypodium KQK16543 , KQK16542 , KQK16541
Barley HORVU7Hr1G122600.8 , HORVU7Hr1G122600.18 , HORVU7Hr1G122600.19 , HORVU7Hr1G122600.13 , HORVU7Hr1G122600.10 , HORVU7Hr1G122600.11 , HORVU7Hr1G122600.14 , HORVU7Hr1G122600.16 , HORVU7Hr1G122600.17 , HORVU7Hr1G122600.15 , HORVU7Hr1G122600.12 , HORVU7Hr1G122600.27 , HORVU7Hr1G122600.26 , HORVU7Hr1G122600.25 , HORVU7Hr1G122600.24 , HORVU7Hr1G122600.23 , HORVU7Hr1G122600.22 , HORVU7Hr1G122600.21 , HORVU7Hr1G122600.20 , HORVU7Hr1G122600.29 , HORVU7Hr1G122600.28 , HORVU7Hr1G122600.34 , HORVU7Hr1G122600.35 , HORVU7Hr1G122600.30 , HORVU7Hr1G122600.31 , HORVU7Hr1G122600.32 , HORVU7Hr1G122600.33 , HORVU7Hr1G122600.9 , HORVU7Hr1G122600.4 , HORVU7Hr1G122600.5 , HORVU7Hr1G122600.6 , HORVU7Hr1G122600.7 , HORVU7Hr1G122600.1 , HORVU7Hr1G122600.2 , HORVU7Hr1G122600.3
Wheat -
Populus -


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cDNA sequences
Sobic.010G279900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G156500 expressed protein -
2 Sobic.007G183300 expressed protein -
3 Sobic.004G086200 peptidyl-prolyl cis-trans isomerase, putative, expressed K09566: peptidyl-prolyl isomerase G (cyclophilin G)
4 Sobic.001G367100 pleckstrin homology domain-containing protein, putative, expressed -
5 Sobic.007G027700 expressed protein -
6 Sobic.003G409200 protein of unknown function, DUF618 domain containing protein, expressed K15559: regulator of Ty1 transposition protein 103
7 Sobic.003G253400 expressed protein -
8 Sobic.003G416700 homeobox domain containing protein, expressed -
9 Sobic.008G100100 MYB family transcription factor, putative, expressed K12860: CDC5L, CDC5, pre-mRNA-splicing factor CDC5/CEF1
10 Sobic.008G057000 SWIRM domain containing protein, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
11 Sobic.010G065300 expressed protein K11643: CHD4, chromodomain-helicase-DNA-binding protein 4
12 Sobic.009G129600 ABTB1 - Armadillo repeats with a Bric-a-Brac, Tramtrack, Broad Complex BTB domain, expressed -
13 Sobic.002G357100 SUMO-activating enzyme subunit 2, putative, expressed K10685: UBLE1B, SAE2, ubiquitin-like 1-activating enzyme E1 B
14 Sobic.004G111000 bromodomain containing protein, expressed -
15 Sobic.004G285000 MT-A70 domain containing protein, expressed K05925: mRNA m6A methyltransferase catalytic subunit
16 Sobic.006G210000 zinc finger domain, LSD1 subclass family protein, expressed -
17 Sobic.010G269300 hydrolase, acting on carbon-nitrogen, putative, expressed -
18 Sobic.001G134300 - K17613: calcineurin-binding protein cabin-1
19 Sobic.002G153700 SWP, putative, expressed K15156: MED14, mediator of RNA polymerase II transcription subunit 14
20 Sobic.003G293200 plus-3 domain containing protein, expressed -


Gene co-expression network
sample Sobic010G279900 Sobic010G279900 Sobic004G156500 Sobic004G156500 Sobic010G279900--Sobic004G156500 Sobic007G183300 Sobic007G183300 Sobic010G279900--Sobic007G183300 Sobic004G086200 Sobic004G086200 Sobic010G279900--Sobic004G086200 Sobic001G367100 Sobic001G367100 Sobic010G279900--Sobic001G367100 Sobic007G027700 Sobic007G027700 Sobic010G279900--Sobic007G027700 Sobic003G409200 Sobic003G409200 Sobic010G279900--Sobic003G409200 Sobic003G253400 Sobic003G253400 Sobic010G279900--Sobic003G253400 Sobic003G416700 Sobic003G416700 Sobic010G279900--Sobic003G416700 Sobic008G100100 Sobic008G100100 Sobic010G279900--Sobic008G100100 Sobic004G156500--Sobic008G100100 Sobic010G065300 Sobic010G065300 Sobic004G156500--Sobic010G065300 Sobic001G134300 Sobic001G134300 Sobic004G156500--Sobic001G134300 Sobic001G306900 Sobic001G306900 Sobic004G156500--Sobic001G306900 Sobic006G118700 Sobic006G118700 Sobic004G156500--Sobic006G118700 Sobic006G210000 Sobic006G210000 Sobic004G156500--Sobic006G210000 Sobic004G156500--Sobic003G416700 Sobic002G357100 Sobic002G357100 Sobic004G156500--Sobic002G357100 Sobic002G259800 Sobic002G259800 Sobic004G156500--Sobic002G259800 Sobic005G200800 Sobic005G200800 Sobic007G183300--Sobic005G200800 Sobic002G145800 Sobic002G145800 Sobic007G183300--Sobic002G145800 Sobic007G183300--Sobic003G416700 Sobic003G214600 Sobic003G214600 Sobic007G183300--Sobic003G214600 Sobic007G183300--Sobic010G279900 Sobic002G154000 Sobic002G154000 Sobic007G183300--Sobic002G154000 Sobic005G220000 Sobic005G220000 Sobic007G183300--Sobic005G220000 Sobic007G168300 Sobic007G168300 Sobic007G183300--Sobic007G168300 Sobic001G051700 Sobic001G051700 Sobic007G183300--Sobic001G051700 Sobic001G346900 Sobic001G346900 Sobic004G086200--Sobic001G346900 Sobic004G285000 Sobic004G285000 Sobic004G086200--Sobic004G285000 Sobic004G086200--Sobic001G134300 Sobic001G245900 Sobic001G245900 Sobic004G086200--Sobic001G245900 Sobic004G086200--Sobic001G306900 Sobic010G096000 Sobic010G096000 Sobic004G086200--Sobic010G096000 Sobic004G086200--Sobic010G279900 Sobic001G246500 Sobic001G246500 Sobic004G086200--Sobic001G246500 Sobic004G086200--Sobic010G065300 Sobic001G367100--Sobic010G279900 Sobic001G315400 Sobic001G315400 Sobic001G367100--Sobic001G315400 Sobic001G367100--Sobic001G245900 Sobic003G023400 Sobic003G023400 Sobic001G367100--Sobic003G023400 Sobic008G080500 Sobic008G080500 Sobic001G367100--Sobic008G080500 Sobic009G151200 Sobic009G151200 Sobic001G367100--Sobic009G151200 Sobic004G128200 Sobic004G128200 Sobic001G367100--Sobic004G128200 Sobic002G079100 Sobic002G079100 Sobic001G367100--Sobic002G079100 Sobic003G077500 Sobic003G077500 Sobic001G367100--Sobic003G077500 Sobic008G127400 Sobic008G127400 Sobic007G027700--Sobic008G127400 Sobic003G401100 Sobic003G401100 Sobic007G027700--Sobic003G401100 Sobic003G412300 Sobic003G412300 Sobic007G027700--Sobic003G412300 Sobic001G143500 Sobic001G143500 Sobic007G027700--Sobic001G143500 Sobic004G325400 Sobic004G325400 Sobic007G027700--Sobic004G325400 Sobic005G216300 Sobic005G216300 Sobic007G027700--Sobic005G216300 Sobic001G395100 Sobic001G395100 Sobic007G027700--Sobic001G395100 Sobic007G027700--Sobic010G279900 Sobic006G267300 Sobic006G267300 Sobic007G027700--Sobic006G267300 Sobic003G409200--Sobic001G346900 Sobic010G215900 Sobic010G215900 Sobic003G409200--Sobic010G215900 Sobic004G111000 Sobic004G111000 Sobic003G409200--Sobic004G111000 Sobic008G057000 Sobic008G057000 Sobic003G409200--Sobic008G057000 Sobic003G427100 Sobic003G427100 Sobic003G409200--Sobic003G427100 Sobic001G501800 Sobic001G501800 Sobic003G409200--Sobic001G501800 Sobic003G409200--Sobic004G285000 Sobic003G409200--Sobic010G279900 Sobic003G409200--Sobic002G145800 Sobic003G253400--Sobic010G279900 Sobic003G062400 Sobic003G062400 Sobic003G253400--Sobic003G062400 Sobic003G253400--Sobic001G395100 Sobic005G040900 Sobic005G040900 Sobic003G253400--Sobic005G040900 Sobic005G025800 Sobic005G025800 Sobic003G253400--Sobic005G025800 Sobic009G192500 Sobic009G192500 Sobic003G253400--Sobic009G192500 Sobic004G347100 Sobic004G347100 Sobic003G253400--Sobic004G347100 Sobic003G253400--Sobic007G183300 Sobic008G058800 Sobic008G058800 Sobic003G253400--Sobic008G058800 Sobic003G416700--Sobic002G154000 Sobic002G264200 Sobic002G264200 Sobic003G416700--Sobic002G264200 Sobic001G461400 Sobic001G461400 Sobic003G416700--Sobic001G461400 Sobic007G183900 Sobic007G183900 Sobic003G416700--Sobic007G183900 Sobic003G416700--Sobic001G051700 Sobic003G360400 Sobic003G360400 Sobic003G416700--Sobic003G360400 Sobic009G119000 Sobic009G119000 Sobic003G416700--Sobic009G119000 Sobic001G063700 Sobic001G063700 Sobic003G416700--Sobic001G063700 Sobic010G275500 Sobic010G275500 Sobic003G416700--Sobic010G275500 Sobic008G100100--Sobic004G156500 Sobic008G100100--Sobic001G306900 Sobic006G032400 Sobic006G032400 Sobic008G100100--Sobic006G032400 Sobic005G015900 Sobic005G015900 Sobic008G100100--Sobic005G015900 Sobic008G100100--Sobic006G210000 Sobic007G031600 Sobic007G031600 Sobic008G100100--Sobic007G031600 Sobic008G100100--Sobic010G065300 Sobic003G241200 Sobic003G241200 Sobic008G100100--Sobic003G241200 Sobic008G100100--Sobic010G096000
Octagon: transcription factors


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